Os06g0209100

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Revision as of 09:09, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0209100| Description = Peptidase A1, pepsin family protein| Version = NM_001063641.1 GI:115467013 GeneID:4340449| Length = 1365 bp| Defini...")
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Gene Name

Os06g0209100

Description

Peptidase A1, pepsin family protein

Version

NM_001063641.1 GI:115467013 GeneID:4340449

Length

1365 bp

Definition

Oryza sativa Japonica Group Os06g0209100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:5568939..5570303

Sequence Coding Region

5568939..5570303

Expression

GEO Profiles:Os06g0209100

Genome Context

<gbrowseImage1> name=NC_008399:5568939..5570303 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:5568939..5570303 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaggcagcagctggtgacgctgctcgtcttgatcgcgctgcccgcgcgcgccgcgtccgcgccgggcgccggcgccggcggcgtcgtcgtggcgcgggtcacgcacgccgacgccggccgcggcctcgccatgccggagatcgtgcggcgcatggcgcaccgcgccagggcgaggcggaggctgctgtcggcggcggaggcggcgccggtgcgcgcgcgggtgcgcgccgggctcggcgccggcggcgggatcgtgacgaacgagtacctgatgcacgtgtccgtgggcacgccgccgcggcccgtggcgctgacgctcgacacggggagcgatctcgtgtggacgcagtgcgcgccgtgcctggactgcttcgagcagggcgccgccccggtgctggacccggccgcgtcgtccacccacgccgcgctcccctgcgacgcgccgctgtgccgcgcgctcccgttcacgtcgtgcggcgggcggagctggggcgaccggagctgcgtctacgtctaccactacggcgacaggtcgctcaccgtcggccagctcgccaccgacagcttcaccttcggcggcgacgacaatgcaggtggcctcgccgcgaggcgcgtcacgttcggctgcggccacatcaacaaaggcatcttccaggcgaacgagacgggcatcgccgggttcggccggggacggtggtcgctgccgtcgcagctcaacgtcaccagcttctcctactgcttcacctccatgttcgacaccaagagcagcagcgtcgtcacgctcggcgcggcggcggccgagctcctccacacccaccacgcggcgcacaccggcgacgtcaggaccacccgcctcatcaagaacccgtcgcagccatccctctacttcgtcccgctgcgcggcatctcggtgggcggcgcgcgggtcgccgtgccggagtcgcggctccggtcgtcgacgatcatcgactccggcgcgtcgatcacgacgctgccggaggacgtgtacgaggcggtgaaggcggagttcgtgtcgcaggtcgggctccccgccgccgccgcgggatcggcggcgctcgacctgtgcttcgctctgcccgtggcggcgctctggcggcgccccgccgtgccggcgctgacgctgcacctcgacggcggcgccgactgggagctcccgcggggcaactacgtgttcgaggactacgcggcgcgcgtgctgtgcgtcgtgctcgacgcggcggccggcgagcaggtggtcatcggcaactaccagcagcagaacacgcacgtcgtgtacgacctcgagaacgacgtgctctccttcgcgccggctcgctgcgacaagctcgcggcctcactgtag</cdnaseq>

Protein Sequence

<aaseq>MRQQLVTLLVLIALPARAASAPGAGAGGVVVARVTHADAGRGLA MPEIVRRMAHRARARRRLLSAAEAAPVRARVRAGLGAGGGIVTNEYLMHVSVGTPPRP VALTLDTGSDLVWTQCAPCLDCFEQGAAPVLDPAASSTHAALPCDAPLCRALPFTSCG GRSWGDRSCVYVYHYGDRSLTVGQLATDSFTFGGDDNAGGLAARRVTFGCGHINKGIF QANETGIAGFGRGRWSLPSQLNVTSFSYCFTSMFDTKSSSVVTLGAAAAELLHTHHAA HTGDVRTTRLIKNPSQPSLYFVPLRGISVGGARVAVPESRLRSSTIIDSGASITTLPE DVYEAVKAEFVSQVGLPAAAAGSAALDLCFALPVAALWRRPAVPALTLHLDGGADWEL PRGNYVFEDYAARVLCVVLDAAAGEQVVIGNYQQQNTHVVYDLENDVLSFAPARCDKL AASL</aaseq>

Gene Sequence

<dnaseqindica>1..1365#atgaggcagcagctggtgacgctgctcgtcttgatcgcgctgcccgcgcgcgccgcgtccgcgccgggcgccggcgccggcggcgtcgtcgtggcgcgggtcacgcacgccgacgccggccgcggcctcgccatgccggagatcgtgcggcgcatggcgcaccgcgccagggcgaggcggaggctgctgtcggcggcggaggcggcgccggtgcgcgcgcgggtgcgcgccgggctcggcgccggcggcgggatcgtgacgaacgagtacctgatgcacgtgtccgtgggcacgccgccgcggcccgtggcgctgacgctcgacacggggagcgatctcgtgtggacgcagtgcgcgccgtgcctggactgcttcgagcagggcgccgccccggtgctggacccggccgcgtcgtccacccacgccgcgctcccctgcgacgcgccgctgtgccgcgcgctcccgttcacgtcgtgcggcgggcggagctggggcgaccggagctgcgtctacgtctaccactacggcgacaggtcgctcaccgtcggccagctcgccaccgacagcttcaccttcggcggcgacgacaatgcaggtggcctcgccgcgaggcgcgtcacgttcggctgcggccacatcaacaaaggcatcttccaggcgaacgagacgggcatcgccgggttcggccggggacggtggtcgctgccgtcgcagctcaacgtcaccagcttctcctactgcttcacctccatgttcgacaccaagagcagcagcgtcgtcacgctcggcgcggcggcggccgagctcctccacacccaccacgcggcgcacaccggcgacgtcaggaccacccgcctcatcaagaacccgtcgcagccatccctctacttcgtcccgctgcgcggcatctcggtgggcggcgcgcgggtcgccgtgccggagtcgcggctccggtcgtcgacgatcatcgactccggcgcgtcgatcacgacgctgccggaggacgtgtacgaggcggtgaaggcggagttcgtgtcgcaggtcgggctccccgccgccgccgcgggatcggcggcgctcgacctgtgcttcgctctgcccgtggcggcgctctggcggcgccccgccgtgccggcgctgacgctgcacctcgacggcggcgccgactgggagctcccgcggggcaactacgtgttcgaggactacgcggcgcgcgtgctgtgcgtcgtgctcgacgcggcggccggcgagcaggtggtcatcggcaactaccagcagcagaacacgcacgtcgtgtacgacctcgagaacgacgtgctctccttcgcgccggctcgctgcgacaagctcgcggcctcactgtag</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0209100, RefSeq:Os06g0209100