Os06g0210900

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Revision as of 09:09, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0210900| Description = Lipase, class 3 family protein| Version = NM_001063651.1 GI:115467033 GeneID:4340460| Length = 3414 bp| Definition ...")
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Gene Name

Os06g0210900

Description

Lipase, class 3 family protein

Version

NM_001063651.1 GI:115467033 GeneID:4340460

Length

3414 bp

Definition

Oryza sativa Japonica Group Os06g0210900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:5656851..5660264

Sequence Coding Region

5656934..5657264,5658729..5658922,5659042..5659075,5659170..5660080

Expression

GEO Profiles:Os06g0210900

Genome Context

<gbrowseImage1> name=NC_008399:5656851..5660264 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:5656851..5660264 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacgacgacgacgactgccggcggcgagatgtcaccttgggcgacgaattcatggtgctgcagccggagaacggcggcgcgcgcagcctcgccgacctgctgctctcctgcaaggtcggcgagaacaaggccgtgcgctgcggccgccccggcgccgaggtggcgctgccgtggcaccggtggatcatcgccgtctccctcctcgcgcagatgctgctccggttgtccaagggggtcatggccaaggtcggccgcgccgtcgagtactggatgaacctcgtcagcgagaatgacaacgtcctcggcctcatcagaaatgctctgcatgggaaggtgaaaacgccggacagaaattctcccaactacagatcgttcattggacttcttgacacaaggatcgatctggacgagaagatcaagccaggtgatagcaattaccacgcagctctctgcatcatggcagcgaaattggcctacgagaacgaactcgtcataaaggacgccgtggaaaagaattggaagatgaccttcttagagttcttcaactgttggaacgatttccagaatgattacacgacccaggcgttcatgttcgccgacaagccggaggacgccgagctcgtcgtggtggcgttccgcggcacgcagccgttcgacatggagcagtggagcaccgacgtcgacatctcgtggtacgagatcccgggtgtgggcaaggtccatggcggcttcatgaaggcgctcgggctgcagaacaacgccgccgccggcaagaaacccagctggccggcggagatcgcgccgccgtcggcggccaagaactccgagaagacgaagagcttcgcctactacgccatccgcgcccgcctgcgcgcgttcctcgccgccaacccgcgcgccaggctcgtcgtgacggggcacagcctcggcggcgcgcttgccgcgctgttcccggtggtcctggcgctgcacggcggcgaggccgacgccgcggcgctcggcaggctggacggcgtgtacacctacgggcagccccgcgtcggcgacgcggcgctcggcgagtgggtcgcggcggcgagctcactggagggcaagcacctccggttcgtgtactgcaacgacgtcgtgccccgggtgccctacgacgacgccgcgttcctgttcaggcacttcggccgctgcgtctacttcgacgccgcgtacagggcgagggccatggcggaggagccgaacaagaactacttctcgccggcgttcgcgttggccaagcacgcgaacgcggcgtgggagctggcgcgagggctcgccatcgggcgcgtggcagggggggagtacgcggaagggtgggcgatgcgggcggcgagggtggtggggctggtgttccccggcttgccgccgcacgcgccgcaggactacgtgaacgccaccaggctcgccggcgcctcgcttcgcaagctgctagactag</cdnaseq>

Protein Sequence

<aaseq>MDDDDDCRRRDVTLGDEFMVLQPENGGARSLADLLLSCKVGENK AVRCGRPGAEVALPWHRWIIAVSLLAQMLLRLSKGVMAKVGRAVEYWMNLVSENDNVL GLIRNALHGKVKTPDRNSPNYRSFIGLLDTRIDLDEKIKPGDSNYHAALCIMAAKLAY ENELVIKDAVEKNWKMTFLEFFNCWNDFQNDYTTQAFMFADKPEDAELVVVAFRGTQP FDMEQWSTDVDISWYEIPGVGKVHGGFMKALGLQNNAAAGKKPSWPAEIAPPSAAKNS EKTKSFAYYAIRARLRAFLAANPRARLVVTGHSLGGALAALFPVVLALHGGEADAAAL GRLDGVYTYGQPRVGDAALGEWVAAASSLEGKHLRFVYCNDVVPRVPYDDAAFLFRHF GRCVYFDAAYRARAMAEEPNKNYFSPAFALAKHANAAWELARGLAIGRVAGGEYAEGW AMRAARVVGLVFPGLPPHAPQDYVNATRLAGASLRKLLD</aaseq>

Gene Sequence

<dnaseqindica>84..414#1879..2072#2192..2225#2320..3230#atcaatttgcttgttcgatcataagctcgatctcgtgcacatcgtcgacgacggcgaccaccggcggatcaatcgccggcggcatggacgacgacgacgactgccggcggcgagatgtcaccttgggcgacgaattcatggtgctgcagccggagaacggcggcgcgcgcagcctcgccgacctgctgctctcctgcaaggtcggcgagaacaaggccgtgcgctgcggccgccccggcgccgaggtggcgctgccgtggcaccggtggatcatcgccgtctccctcctcgcgcagatgctgctccggttgtccaagggggtcatggccaaggtcggccgcgccgtcgagtactggatgaacctcgtcagcgagaatgacaacgtcctcggcctcatcagaaatgctctgcatggtatgtgtgattttattagacctgcatttaagtttaattttatgtatatatatgtacaatgatctcgctttttatgctagttaactaatgttgttttggaaggtgatatttaaacaccccaaaaaaaagttcatccattgcatttgttgcccagcactccagcttaaaagctagtttcttgggggaagtatatatgtgctttgttgagttgctagttaggaaaatttgatttgatgcaaatgccaacgggaataatttggatggacgtttaattgatttgttgttctcttattattatgaagtattgataattatggagagttcagaccaatgcacaacgttttttacttaaaaacatggacaataatctctgacatgcatgcagtttgatttagttcagggaaagacacgttttcagtaattttaaaaacgaatatgcgttgcccatgcattgagcttgagcaagcactaagcaccagcatacagttaatttgaataagaaggggaggatgttatagtttatatctttggaatatcattaagtgatcaatatcttttttattaaaaaaaacatgtcgtgctataagattagcagcccctctttagctctagcaaattgggttttgttgatcagtacagcagtatacgattatttattatctatgctaattattatgttgacgcagaggtcatataaacaataattccattaggtctactccctatgtcccaaaaaaagacaaatcatgggtttccgtgtccaactttaactgtccgtcttatatgaaatttttttataatttgtattttcattgttgttagatgataaaacatgattaatattttatgcgtgacttgtctttctaattttttttttcataatttttttaaataagacgaacggtcaaacattggacacggaaagtagggtttgtctttttttttttaagacggagggaggagctaagctcacacatagctggcttgcaggcttggaagatactatctaacttgtttcttgtcagaactcattattatttatatgcattgctggtagttagtcatgtgaagagttcagctcaaccaatcttaattcctatccaaaacaaggataatgtacactaatttcttataccatgttatgagggttgtttaatcctctaatcaactaacttgaatatagtcattagcttgatctcttccttccgggcccacaggtcgcaacaatcatgtccttgatacacgccttatgattattgtcatttactccacatgtttcacaagaattgaactcaaaaagagttgttacaaaaacacatctttgcaaatacatgtacaatgtatttaccaggacccttatagctagtcaagttaagatcagatacatttcaaacaaatagtgcaattaaagacagtgattttcagacaatattagtgctgtagcacttacattttacattgcagggaaggtgaaaacgccggacagaaattctcccaactacagatcgttcattggacttcttgacacaaggatcgatctggacgagaagatcaagccaggtgatagcaattaccacgcagctctctgcatcatggcagcgaaattggcctacgagaacgaactcgtcataaaggacgccgtggaaaagaattggaaggttcgaacactttgaattgatgttttttgaaattttttgcaattaaactctacgaaataaaacatattatgtctttgaattaacaactatcatttcgtttcgtgctcatgattttacagatgaccttcttagagttcttcaactgttggaacggtaagatatccaagtacagactttgattactactaatgacaaagttataattgatgaataaactaatgagttttcgtaattgctcctggttcagatttccagaatgattacacgacccaggcgttcatgttcgccgacaagccggaggacgccgagctcgtcgtggtggcgttccgcggcacgcagccgttcgacatggagcagtggagcaccgacgtcgacatctcgtggtacgagatcccgggtgtgggcaaggtccatggcggcttcatgaaggcgctcgggctgcagaacaacgccgccgccggcaagaaacccagctggccggcggagatcgcgccgccgtcggcggccaagaactccgagaagacgaagagcttcgcctactacgccatccgcgcccgcctgcgcgcgttcctcgccgccaacccgcgcgccaggctcgtcgtgacggggcacagcctcggcggcgcgcttgccgcgctgttcccggtggtcctggcgctgcacggcggcgaggccgacgccgcggcgctcggcaggctggacggcgtgtacacctacgggcagccccgcgtcggcgacgcggcgctcggcgagtgggtcgcggcggcgagctcactggagggcaagcacctccggttcgtgtactgcaacgacgtcgtgccccgggtgccctacgacgacgccgcgttcctgttcaggcacttcggccgctgcgtctacttcgacgccgcgtacagggcgagggccatggcggaggagccgaacaagaactacttctcgccggcgttcgcgttggccaagcacgcgaacgcggcgtgggagctggcgcgagggctcgccatcgggcgcgtggcagggggggagtacgcggaagggtgggcgatgcgggcggcgagggtggtggggctggtgttccccggcttgccgccgcacgcgccgcaggactacgtgaacgccaccaggctcgccggcgcctcgcttcgcaagctgctagactagacagttagcccactctcttgctctgcgactgatgaactgatcaccaattcaccagtggaaatgaatcgagcacgggaacggaactgaattattttccggttcctgtgatagaaagatgaaactttgaaaattcatgcaaaaatttgtgtagtatattcgaaatctatgaagcaataggtttgtc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0210900, RefSeq:Os06g0210900