BGIOSGA028579

From RiceWiki
Revision as of 17:13, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA028579

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028579, complete gene.

LocusTag

OSJNBB0011E04.124

Ensembl Transcript ID

BGIOSGA028579-TA

Ensembl Protein ID

BGIOSGA028579-PA

Length

3700

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:19064958..19068657

Sequence Coding Region

19064958..19065290,19065732..19065838,19066243..19066696,19066827..19066898,19067008..19067129
,19067284..19067499,19067597..19067705,19067823..19067935,19068177..19068324
,19068535..19068657

Genome Context

<gbrowseImage1> name=IndicaChromosome08:19064958..19068657 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:19064958..19068657 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCTCCATCTCACCGCCGCCCCGATCATTGCACCCTCCGCGGCCGCCGCCTGCAGGTCGCTGGCGCCGCCTCTCCCCGCCGTTTCGTGCTCGACTAGTAGGAGGGGGTGGAGGAGGAGGAGGCGGTGTGTCTCGGTGGTGGCCATGGCGGCGGCGGCGGACGGGGAGATGCGGCATGGGCACGCGGCGGAGGCTGGCGGTGGTGGTGCTGGGACTGGCACTGGGAGGATGAACCTCAACGAGTACATGGTCGCCGTCGACCGCCCGCTCGGCGTCCGCTTCGCGCTCGCCGTCGACGGCCGCGTCTTCGTCCACTCCCTCAAGAAAGGGGGGAATGCGGAGAAATCACGGATTATCATGGTAGGGGACACTCTGAAGAAGGCTGGCAGTCGTGAGGGCGTGGGTCTTGTTGACATCAGAGACCTAGGTGACACGGAAATGGTGTTGAAGGAAACGTCAGGGCCATGCGATCTTGTCCTTGAGAGGCCATTTGCTCCTTTCCCGATACATCAGTTGCATCAAAATGAAGATTATCATCTCCTATTTAACAAGGGTAGGGTTCCTCTTACTAGCTGGAACGGTGCTCTATTATCATCAAAGCTGAATGAATCATCTGAGGGGAACGGAAATCCTGGATTTGCCATATTTTCGCCAAGGCTGCTAAATTCACATGGATGGGCAGTTTTGTCTAGTGAGCAAGATGGACTTAATCAGCGCAGTACTAGCCTTGCAAATCGTATAAGTGAGATTGTTGGTTTGTACTCTGATGAGGATGATGCAGATACTGAATGGGCACATGGTAGCTTTCCTTTGGAAGAGTACATTAAAGCACTAGACCGTGCTAAAGGTGAACTGTACTACAATCATTCACTTGGTATGCAATACAGCAAGATCACAGAACAAATATTTGTTGGATCATGCCTACAAACAGAAAGAGATGTGAAAATGCTATCAGAGACTATGGGTATCACTGCTGTTCTGAATTTTCAAAGTGAAAGTGAGCGCACCAATTGGGGAATCAATTCAGAGGCAATCAACAATTCTTGTCGCGAGAACAACATTTTGATGGTTAACTACCCTATACGAGAGGTTGATTCAATGGACCTGAGGAAGAAGCTTCCTTTCTGTGTTGGTCTTCTACTGCGGCTTATAAGGAAGAACTACCGCATATATGTGACTTGTACCACTGGATATGATAGATCACCAGCATGTGTGATTGCATATCTACATTGGGTGCAGGATACGCCTCTCCATATTGCTCACAAGTTCATCACTGGTTTGCACTCCTGTAGACCTGACAGAGCTGCAATTGTGTGGGCAACATGGGATCTCATTGCACTAGTTGAAAACGGAAGACATGATGGTACTCCCACACATTCAGTATGCTTTGTTTGGAACAGTGGTCGGGAGGGTGAGGATGTGGAATTGGTGGGGGATTTTACAAGTAACTGGAAAGACAAAGTAAAGTGTAACCACAAAGGTGGGTCAAGATATGAAGCTGAAATTCGACTTCGACATGGGAAGTACTATTACAAATTCATAGCAGGGGGCCAGTGGAGGCACTCGACTTCATTGCCAACAGAGACTGATGAACATGGGAATGTCAACAATGTTATCAGGGTTGGTGACATCGCTCGTATTCGGCCTGCTCCCAGCCAACTGCAGATAAGGGACCCAACTGTTGTCAAGGTCATAGAGAGGGCACTAACTGAGGACGAGCGATTCTTACTGGCCTTCGCTGCACGCCGCATGGCATTTGCAATCTGCCCAATCAGATTGTCTCCCAAGCAATGA</cdnaseq>

Protein Sequence

<aaseq>MALHLTAAPIIAPSAAAACRSLAPPLPAVSCSTSRRGWRRRRRCVSVVAMAAAADGEMRHGHAAEAGGGGAGTGTGRMNLNEYMVAVDRPLGVRFALAVDGRVFVHSLKKGGNAEKSRIIMVGDTLKKAGSREGVGLVDIRDLGDTEMVLKETSGPCDLVLERPFAPFPIHQLHQNEDYHLLFNKGRVPLTSWNGALLSSKLNESSEGNGNPGFAIFSPRLLNSHGWAVLSSEQDGLNQRSTSLANRISEIVGLYSDEDDADTEWAHGSFPLEEYIKALDRAKGELYYNHSLGMQYSKITEQIFVGSCLQTERDVKMLSETMGITAVLNFQSESERTNWGINSEAINNSCRENNILMVNYPIREVDSMDLRKKLPFCVGLLLRLIRKNYRIYVTCTTGYDRSPACVIAYLHWVQDTPLHIAHKFITGLHSCRPDRAAIVWATWDLIALVENGRHDGTPTHSVCFVWNSGREGEDVELVGDFTSNWKDKVKCNHKGGSRYEAEIRLRHGKYYYKFIAGGQWRHSTSLPTETDEHGNVNNVIRVGDIARIRPAPSQLQIRDPTVVKVIERALTEDERFLLAFAARRMAFAICPIRLSPKQ</aaseq>

Gene Sequence

<dnaseqindica>1..333#775..881#1286..1739#1870..1941#2051..2172#2327..2542#2640..2748#2866..2978#3220..3367#3578..3700#ATGGCGCTCCATCTCACCGCCGCCCCGATCATTGCACCCTCCGCGGCCGCCGCCTGCAGGTCGCTGGCGCCGCCTCTCCCCGCCGTTTCGTGCTCGACTAGTAGGAGGGGGTGGAGGAGGAGGAGGCGGTGTGTCTCGGTGGTGGCCATGGCGGCGGCGGCGGACGGGGAGATGCGGCATGGGCACGCGGCGGAGGCTGGCGGTGGTGGTGCTGGGACTGGCACTGGGAGGATGAACCTCAACGAGTACATGGTCGCCGTCGACCGCCCGCTCGGCGTCCGCTTCGCGCTCGCCGTCGACGGCCGCGTCTTCGTCCACTCCCTCAAGAAAGGGGTAAGCATTTGTATCATCTCCGGCTCGCCCGCTGCGGTTACGACACTTCTTCATTTGTTTACTGTTTAGCGCAATCCATCCAGTCTGCTGCTGCTCAATGCTCACCTCATCCCACTTCACTTGGTAGTTGGTGCTGTGCAATTGCCACAGCTCCTGCTGCGCAGCAAAATTCACAGGCAGCATCATGCTGCCCACGTTGGTGTTTACGGCATTTCATTTCATCTGATGTGAATTTTACTGTAACCACTCGATGTTAGTGTCATGAGCAAGGGGATACTGGGAAATTGTCGTCTGGTCAATAGTTGACATACTAGTTTACTTAACTTTTCTTCTTGTTCGTTGTGGAACTAAGATTTTTATCATTTTTAACTATCTCTAGTTGGGTATGGTTGTGGAGGCCTTGCAATTTTGCTGACTGTTGGTGCTGCATCCGTGTGACAGGGGAATGCGGAGAAATCACGGATTATCATGGTAGGGGACACTCTGAAGAAGGCTGGCAGTCGTGAGGGCGTGGGTCTTGTTGACATCAGAGACCTAGGTGACACGGAGTACGGAACTAGTAAAGTTTTTCTAGCTGAAACAGTATTCCTTTGCTCTTCTGTCTACATCATTTTCTGCAAAATTTAATAAAAAAAATGTGATATGACTGTTTGGAACTAGTAAGATGTACTGTATCTATTGGAACTTAGAGCTCATATTTGATTACATTTGATAATTTAAGGTCACGTCAAAATTTTATGACTGTAAGATGATGTAAAATGGTTTAGTTCAAATGTTCCAGAAATCAGAAGCTCTGCACAGAATAGAGTTAGCAAATGTGACAAGTGCAACATTGGCAATGTCTAAATATTACATGTCAACTAAAAAATAATACCAGCAGTGGAGTAACATTTCTAGTTGATTGTCAAAATGAATACAACTTTTCTTATGTTGCCTTTCAACTTTCATGTAGAATGGTGTTGAAGGAAACGTCAGGGCCATGCGATCTTGTCCTTGAGAGGCCATTTGCTCCTTTCCCGATACATCAGTTGCATCAAAATGAAGATTATCATCTCCTATTTAACAAGGGTAGGGTTCCTCTTACTAGCTGGAACGGTGCTCTATTATCATCAAAGCTGAATGAATCATCTGAGGGGAACGGAAATCCTGGATTTGCCATATTTTCGCCAAGGCTGCTAAATTCACATGGATGGGCAGTTTTGTCTAGTGAGCAAGATGGACTTAATCAGCGCAGTACTAGCCTTGCAAATCGTATAAGTGAGATTGTTGGTTTGTACTCTGATGAGGATGATGCAGATACTGAATGGGCACATGGTAGCTTTCCTTTGGAAGAGTACATTAAAGCACTAGACCGTGCTAAAGGTGAACTGTACTACAATCATTCACTTGGTATGCAATACAGCAAGGTAATTGTCCTCCTATAACTAATTAGTTCTTGGATGTGCATCAAAAGATTTTAATATTAACAGTGTTTTTGTCTTGTTGATATCCTCTCAGGACTTTAAGCTTACTCATTTTCCGTATATTTTTTAACAGATCACAGAACAAATATTTGTTGGATCATGCCTACAAACAGAAAGAGATGTGAAAATGCTATCAGAGACTATGGTAGGTTCCTCACATATGCAATGACAAATCTCATAACTGGTACTTCGAAAGGCTTTTTGCGTGTCCTTTAATTATCAAATTAAGTTTCTGATATTTCAAAAGGCTTCAGGGTATCACTGCTGTTCTGAATTTTCAAAGTGAAAGTGAGCGCACCAATTGGGGAATCAATTCAGAGGCAATCAACAATTCTTGTCGCGAGAACAACATTTTGATGGTTAACTACCCTATACGGTAGGATATGGTTTTCTCTTTTTGTAAAAGATCATAGTGAAAAACCTATTTGACTCTTGTAGCATAATATATTTGTAGTTGTTATTGGCATGCTAAGCTTATCAGTCTAATATTCATCAAACTCTAAGTGGCATTTCTGATTTAATTTTTTCAGAGAGGTTGATTCAATGGACCTGAGGAAGAAGCTTCCTTTCTGTGTTGGTCTTCTACTGCGGCTTATAAGGAAGAACTACCGCATATATGTGACTTGTACCACTGGATATGATAGATCACCAGCATGTGTGATTGCATATCTACATTGGGTGCAGGATACGCCTCTCCATATTGCTCACAAGTTCATCACTGGTTTGCACTCCTGTAGACCTGACAGGTGTTGTTAGTTGACATAATTTTCTTAATTGACTGGGCTTGATCCATCTGCATAAGCAGTGTTGATCCTTAATGTCCACATTTGTCTGAATATGCAGAGCTGCAATTGTGTGGGCAACATGGGATCTCATTGCACTAGTTGAAAACGGAAGACATGATGGTACTCCCACACATTCAGTATGCTTTGTTTGGAACAGTGGTCGGGAGGTACATTTTGCCTAATGCGGAATGCATCAATTAGCAGTGTACTTTTTGTCTAAAAAATCACTATTTTAGCTTGATATTCAGTAAACTGATGAAGTTGAATGCACAATTTTTTTCTAGGGTGAGGATGTGGAATTGGTGGGGGATTTTACAAGTAACTGGAAAGACAAAGTAAAGTGTAACCACAAAGGTGGGTCAAGATATGAAGCTGAAATTCGACTTCGACATGGGAAGTAAGTAGTCAATCCTTCGATCTTATATTTTCTAACCCAGAAGCATGTAACATTCTTATATGCCTTGGGCTCAACTTCATCATTGGCTGAAAAGGATAAGGAACATCATCTTCCTTCCATTTCTCCATTTCTGATCCCTTCACTGCTGATCAAGAGTTATCTGCAACTAACAACATTTCTCCACTTCTGATCCCTTCACTGCTGATCAAGAGTTATCTGCAACTAACAACATTTTATTCAGGTACTATTACAAATTCATAGCAGGGGGCCAGTGGAGGCACTCGACTTCATTGCCAACAGAGACTGATGAACATGGGAATGTCAACAATGTTATCAGGGTTGGTGACATCGCTCGTATTCGGCCTGCTCCCAGCCAACTGCAGATAAGGGTATGCATCCCCAATTACTCACTTGCTCTAGTGACCCCAACTGAGAATATTTGTGTCTTAGCCCACCTGCCTATATGTACGCCAGACATTCATTCTCCTCGCTCCATTGTATCATTCATGCATATCAATTTTTATAGGTATATCTTATTCGATTTTTTTAATAGGTATAGGTTTAACATATAAAAAAAATTGTGTTTTCTCCCATGTCAGGACCCAACTGTTGTCAAGGTCATAGAGAGGGCACTAACTGAGGACGAGCGATTCTTACTGGCCTTCGCTGCACGCCGCATGGCATTTGCAATCTGCCCAATCAGATTGTCTCCCAAGCAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028579