Os06g0213400

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Revision as of 09:09, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0213400| Description = Protein of unknown function DUF829, eukaryotic family protein| Version = NM_001063663.1 GI:115467057 GeneID:4340472| ...")
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Gene Name

Os06g0213400

Description

Protein of unknown function DUF829, eukaryotic family protein

Version

NM_001063663.1 GI:115467057 GeneID:4340472

Length

4800 bp

Definition

Oryza sativa Japonica Group Os06g0213400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:5783200..5787999

Sequence Coding Region

5783513..5783985,5784766..5784904,5784994..5785233,5785462..5785497,5785605..5785685
,5786121..5786178,5787624..5787814

Expression

GEO Profiles:Os06g0213400

Genome Context

<gbrowseImage1> name=NC_008399:5783200..5787999 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:5783200..5787999 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtggcccggctgcggcggccgcttctactgggcgcccgcgccgccgtcgccgtcggcggcgggcgcgaggggcgtcgtggtggtgttcgggtgggtgtggagcgacgaggcgcagctgcggccgttcgtcgagctctacgcgtcgctcgggtggcgctgcctcgtctgccaccccgacctcgtcgcgctgtatctgtctgagaaagctgcgtcgctggcatctggtgttatcagtgaattagtgaaggaattcaaagtaaagccattgccaactgtgtttgcttccttttctggtggttcaaagggatgcatgtacaaggttattcagttacttgatggaaactgtgaaggagatgcaaccatgaaggactataggttggtgagaaactgtatctgtgggcaaatctatgactctggcccagtagattttttcagtgatgtgggtacccagtttctccaaaatcctatgattggcaactcatctcgaccatccatgttactttcatggatgacaaaggcccttgcatctggaatggacacactattcccaagcagaattgaagctcagcgtgcagagtactggcacacactatattcatcagcagggctgggtcctgttcttatgctttgctctgaagatgatgatcttgctccatgtcatgttgtctgtggttttgccaggcgtctcattgaactgggtactgatgttaaagttatcaagtggagtgattcccctcatgttggccattacatgttgcatgaagcagaatacaggagtgctgtaaatgatactctgataaaagctcttgtcaccttttgccacagaagccagctgaatgccacaagtgatcaggaatacaagatagcacactccgtgtgcagtctgcacaacgtggctgctaattcaaatgagaggctgagaagggtagccaacggccccagtgaccacttcttcttgccaagttcaaaggaccataatgaatctagggatccggattctttgattgatgaacagaggcgacaactatcctatccacccagcatggagcctcaaggagtccttggccaaattctgtttgatgtttgtgttccgaagaacgttgaaggatgggacatcaaaccaacagtgtccccaaacggacggccaacattggcttctgcgcggcaactcggccctttcaatcccatcaagtattttcgacgctcaaggctataa</cdnaseq>

Protein Sequence

<aaseq>MWPGCGGRFYWAPAPPSPSAAGARGVVVVFGWVWSDEAQLRPFV ELYASLGWRCLVCHPDLVALYLSEKAASLASGVISELVKEFKVKPLPTVFASFSGGSK GCMYKVIQLLDGNCEGDATMKDYRLVRNCICGQIYDSGPVDFFSDVGTQFLQNPMIGN SSRPSMLLSWMTKALASGMDTLFPSRIEAQRAEYWHTLYSSAGLGPVLMLCSEDDDLA PCHVVCGFARRLIELGTDVKVIKWSDSPHVGHYMLHEAEYRSAVNDTLIKALVTFCHR SQLNATSDQEYKIAHSVCSLHNVAANSNERLRRVANGPSDHFFLPSSKDHNESRDPDS LIDEQRRQLSYPPSMEPQGVLGQILFDVCVPKNVEGWDIKPTVSPNGRPTLASARQLG PFNPIKYFRRSRL</aaseq>

Gene Sequence

<dnaseqindica>4015..4487#3096..3234#2767..3006#2503..2538#2315..2395#1822..1879#186..376#agcgacgagccaaacgccgaagcgactcctcgtttcgtctcctccccatctctccccccttccgcttccgagccaagcaaccgagcggagcagcacaaaccctccttctccgcctcgattccgcgcgcgcgtgggtccccccacctcaccgtcaccggaggagcagcaccggggggtcgctggccatgtggcccggctgcggcggccgcttctactgggcgcccgcgccgccgtcgccgtcggcggcgggcgcgaggggcgtcgtggtggtgttcgggtgggtgtggagcgacgaggcgcagctgcggccgttcgtcgagctctacgcgtcgctcgggtggcgctgcctcgtctgccaccccgacctcgtcgcgctgtgagcaccgctcccctttccttccccctgctgcaagtggtttcgtttggccgcgctactcatcgcgtgcgctcgtggaagtggtcgcttgtagttctatagcctctgccgcgcggatgtaattatagctgttttaggttcaattttagcgatagctcggcttgttcaatcgggggaggcggatttaggtttagttttatgcgactatattttgggatctaatttgtcggtcgaggagcgttgaatggatcatctccctccttgaagcgcttaaaccatggttgtttagccatcttagcttgagaattgctgcagccgtgtgatctttacttcttttttatggtagaaatgactaggtaactgcagcaaaaagatgtttagctgaattgcttggtcggactttgattatcacattacatttggaggttttggtgttacagtatattgattggaggatagtggtaggtttttattgtgtggatttgtggtaacctgatctttgtatgatcaggttgggacaattatagggattttcttggatctcactgaatctgtttagaaataacatcacgagatttaaatccttcttctgttacattttgacctttaaggtcttcttttatcttcagccacaatttcttagcatcagtattcatagtcgttacccctttcttattctctttttcatgtacatatgctaagttgaactagtaagataatatcaataaaagagacggaattttcccagtttcgttaacgaaataaacacttgcgccaacaaaaaggggaaaagtagagggggtgggcatcatcatgacacactacgtaacaagttcattttttaaaaaaaggtactctattaatcaactatcagaaatggcaacaaaataattgaaacaccaacgagaactcacatgatgacaccaacagcaactcaaatttcttctagaaaatgagtattacacccattaccaaccttcttttcacagagacatacaagggcatatcatgccctaccataaatgtgacttcccaagttatcctttttatttcagagaatctggagccgacatatctcctcaagagttaagaaggcctttatttctcgcatttagattgagcactcgaagacacatttataagctttttaatcattgatataaatgaatctatacacaatggaatatatcgcattgactaatatttgtaaattaagtatgtaatataatactccatcagatagtgctgaagggtagggttctttttatcagcatcatttaatttgctggaggagtaataaacattattcaatagggtgattatggccttttatcctgaatgagatataacagggatcttatacttggagagatcaagtgtaaaatttcagatgatccctttgtagatgttatactactacttcattaattctttccttcatgtaggtatctgtctgagaaagctgcgtcgctggcatctggtgttatcagtgaattagtgaaggttagtgctctattgtcttggcatacacaacaaatactgtattacatagggaacaccgatagctttgttgctcaaagtgggaattattaaaatgtatgctgcttggtgttttggcaagtggcgacagtgtaaaataagcccatccctgtgttagcacgaataagcgttgtgcagtatacttgggaaattcctcagtttgacttgttagttctttagctgttatatacacattaaatccatagctgtaactggaaattcatgtgtgtaactgtgcatcccttcataatcttattgttgacacggatctgtgttatgcatgctttcatatgaaaaacatgcattactgttgaaattttgtaaaatctaccaggaatactattattcttgattatttttgcagtctttctggaattacatgaaatggtgctgtttcaggaattcaaagtaaagccattgccaactgtgtttgcttccttttctggtggttcaaagggatgcatgtacaaggttattcaggtacaagcctgaccactatctttttgaacgatctgatcgtaaacaatatctattctttcattttattcttcacagttgaaatgactgaattttcttgtctgttccagttacttgatggaaactgtgaaggagatgcaaccatggtatgctctttcttttatgtttttttacctgaaaggagcacatccatttatattcattactaaaaaccttgtacatttggttgagtgtattgatctatttcatttgaatataccttgtcatcatatctgctctaccgtttgcattgtggatattggctagttggacaacagccttgaatattttggcaaaagggttgatctattattgacagaattttcattatgcagaaggactataggttggtgagaaactgtatctgtgggcaaatctatgactctggcccagtagattttttcagtgatgtgggtacccagtttctccaaaatcctatgattggcaactcatctcgaccatccatgttactttcatggatgacaaaggcccttgcatctggaatggacacactattcccaagcagaattgaagctcagcgtgcagagtactggcacacactatattcatcagcagtaagtccagattttgcccatgtgatagtgtgattgttgcatctctctcactggtcacaactgtaccaactattttcatttgtttgcaggggctgggtcctgttcttatgctttgctctgaagatgatgatcttgctccatgtcatgttgtctgtggttttgccaggcgtctcattgaactgggtactgatgttaaagttatcaagtggagtgattcccctcatgttggtatgttcttatgttcgtatccagctatattatgtggaatctctgattacaaagattgtaaaatacctcattctgtttaagaacataacagcttggacattcagtaatcagtatgtgactctgaccttcacttaaatcccatgacaaatatgatggcgctattttcacattataagtactctttacctctttgacaccaatctgatgacaggatctaaatttaattacatacttacaatcagataattttgactgacactttccagaaggacatgtatttcttaacggatgggattgtaggaacatggattttgcatgatcattcttgcacctagcattccagagcaggcattaatgtgatattgaattgtcaataaaatcaactgactggttttgaagactcacctttgagctcatgtcctagaacaattcacaactgaagacaataaattcatcatttgcattatttactagttagcatcctttcccatgtatagtgatgacttgaaatattttgtacctatcaattaagcaaagaattcattttaagctcagctatccaatatgagctgtttgcacatttatattgctagacatgaggatgctatactttaatcttatggtctacattgcaaccggcgatatagtctacaattatttatgggtgtatcattatcaacttaaagctttaacatttcttctctgctacagtgctactagacaattatcaaatttaatggactatcataatatcagataacctcccttgatattatgcaggccattacatgttgcatgaagcagaatacaggagtgctgtaaatgatactctgataaaagctcttgtcaccttttgccacagaagccagctgaatgccacaagtgatcaggaatacaagatagcacactccgtgtgcagtctgcacaacgtggctgctaattcaaatgagaggctgagaagggtagccaacggccccagtgaccacttcttcttgccaagttcaaaggaccataatgaatctagggatccggattctttgattgatgaacagaggcgacaactatcctatccacccagcatggagcctcaaggagtccttggccaaattctgtttgatgtttgtgttccgaagaacgttgaaggatgggacatcaaaccaacagtgtccccaaacggacggccaacattggcttctgcgcggcaactcggccctttcaatcccatcaagtattttcgacgctcaaggctataatttgtctgctgcaactgtgagttttgtgtacataacggaggcaagatgtctaatatgactctgagcaagctttctcctatgtaagtttccttgagattgactcacctgcaatttcttttttgcaccgatgactgtacatatgttgtgtatagttatactagtggatatattagaaggggccttctaggttgggatggtaaggtgtatactaacagtgtataggggaaggtgtgcactattatggccctaaattatctatttttgtgccccatagtcatatgatctaatctaattatgagaactatttatcttc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0213400, RefSeq:Os06g0213400