Os06g0215500

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Revision as of 09:09, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0215500| Description = Similar to Oxo-phytodienoic acid reductase| Version = NM_001063674.1 GI:115467079 GeneID:4340484| Length = 1976 bp| ...")
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Gene Name

Os06g0215500

Description

Similar to Oxo-phytodienoic acid reductase

Version

NM_001063674.1 GI:115467079 GeneID:4340484

Length

1976 bp

Definition

Oryza sativa Japonica Group Os06g0215500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:5877575..5879550

Sequence Coding Region

5877780..5878573,5879033..5879414

Expression

GEO Profiles:Os06g0215500

Genome Context

<gbrowseImage1> name=NC_008399:5877575..5879550 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:5877575..5879550 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgcagcatcatcaagcggcggcgaacgacgatcatcaggctatcccgctgctgacaccgtacaagcaggctgggcgcccggggtcgaagcttgacctctcccaccgtgtgctgctcgcgccgatgacgcggtgccgatcctacggcaacgtgccgcagccgcacgcggcgctgtactacacgcagcgcgccacccgcggcggcctcctcatcacggaggccaccggcgtctccgccaccgcgcagggctacccggagacacccggcgtccggacgcgggagcacgtcgaggcgtggaagcccatcgtcgacgccgtccaccgcaagggcgccctcttcatctgccagctctggcacgtcggaagagtctccaacaacggtttccagcctgacggattggctcccatctcaagcaccgacaaggcgatcacaccggacggctatgggatggtgtactccaagccgcgacggcttcggacagacgagatcccgcaaatcgtcgacgatttcaggctcgctgccaggaacgcagtcgaggccgggttcgacggtgttgagatccacggcgcgaacggctacctcctcgagcaattcatgaaggacagctccaacgaccgcaccgacgagtacggcggcagcctcgagaaccggtgccgcttcgccgtcgaggtgatcgacgccgtcgtcggcgagatcggcgcccacagcgtcggcatcaggctgtcgccgttcctggactacatggactgcgtcgactccgacccggaggcactcggctcgtacatggtggagcagctgaacaagcacgaggatttcctctactgccacatggtggagcctcgcatggccatcgtcgacggccgccggcaaattcagcacggcctcttgcccttcaggaagcagttcaatggcacgttcatcgccgccggagggtacgaccgggaagaagggaacaaggcggttgccgatggctatgccgacctcgtcgcctatgggaggctcttcttggcgaatcctgatctgcccaagaggttcgagctcgatgcgcccatgaataactacgatcgcaacaccttctacacgcaggatcctgtggttgggtacaccgactatcctttccttgacgagcatcaccatgacgacgacgatgactctaatgctccttctgcttaa</cdnaseq>

Protein Sequence

<aaseq>MVQHHQAAANDDHQAIPLLTPYKQAGRPGSKLDLSHRVLLAPMT RCRSYGNVPQPHAALYYTQRATRGGLLITEATGVSATAQGYPETPGVRTREHVEAWKP IVDAVHRKGALFICQLWHVGRVSNNGFQPDGLAPISSTDKAITPDGYGMVYSKPRRLR TDEIPQIVDDFRLAARNAVEAGFDGVEIHGANGYLLEQFMKDSSNDRTDEYGGSLENR CRFAVEVIDAVVGEIGAHSVGIRLSPFLDYMDCVDSDPEALGSYMVEQLNKHEDFLYC HMVEPRMAIVDGRRQIQHGLLPFRKQFNGTFIAAGGYDREEGNKAVADGYADLVAYGR LFLANPDLPKRFELDAPMNNYDRNTFYTQDPVVGYTDYPFLDEHHHDDDDDSNAPSA</aaseq>

Gene Sequence

<dnaseqindica>978..1771#137..518#acacagccaaagcgtttagcaagaacagagcaaagagctagcctagctagatcatcgcatcgcatttgttagttttccatcgccgattgatacatacatcatccaagcagagcaatcaccaatcaaccgagacaagatggtgcagcatcatcaagcggcggcgaacgacgatcatcaggctatcccgctgctgacaccgtacaagcaggctgggcgcccggggtcgaagcttgacctctcccaccgtgtgctgctcgcgccgatgacgcggtgccgatcctacggcaacgtgccgcagccgcacgcggcgctgtactacacgcagcgcgccacccgcggcggcctcctcatcacggaggccaccggcgtctccgccaccgcgcagggctacccggagacacccggcgtccggacgcgggagcacgtcgaggcgtggaagcccatcgtcgacgccgtccaccgcaagggcgccctcttcatctgccagctctggcacgtcggaagagtctccaacaacggtacgtgcaccacgaaatatgtacattcttgttgatgaatttgccgggaaagtgaaatcatccctcgaggggatatcccctcgtttcgtgcatgtcacctaaatagttataaaaaattataaaaaaaattggcaacatagattaatacgaaatatatcactccacaaacatgcaagtttaaggtcaacttctacaagttgtaacaaaaataacaaatatagttgtgaatgtgcattaactattttcagtttaatttgttatttttgttgcaacttatagaagttgaatttggttttgcatgtttgtggagtgatatatttcgtattaatctatgttgtcaatttttttaaaaaaatttgataactatttagaagacatgcgaataacgagggatgtcgctggatgaaaatccacatccgaatttgccgtgtgtttctcatcctgcatgctctgctacaggtttccagcctgacggattggctcccatctcaagcaccgacaaggcgatcacaccggacggctatgggatggtgtactccaagccgcgacggcttcggacagacgagatcccgcaaatcgtcgacgatttcaggctcgctgccaggaacgcagtcgaggccgggttcgacggtgttgagatccacggcgcgaacggctacctcctcgagcaattcatgaaggacagctccaacgaccgcaccgacgagtacggcggcagcctcgagaaccggtgccgcttcgccgtcgaggtgatcgacgccgtcgtcggcgagatcggcgcccacagcgtcggcatcaggctgtcgccgttcctggactacatggactgcgtcgactccgacccggaggcactcggctcgtacatggtggagcagctgaacaagcacgaggatttcctctactgccacatggtggagcctcgcatggccatcgtcgacggccgccggcaaattcagcacggcctcttgcccttcaggaagcagttcaatggcacgttcatcgccgccggagggtacgaccgggaagaagggaacaaggcggttgccgatggctatgccgacctcgtcgcctatgggaggctcttcttggcgaatcctgatctgcccaagaggttcgagctcgatgcgcccatgaataactacgatcgcaacaccttctacacgcaggatcctgtggttgggtacaccgactatcctttccttgacgagcatcaccatgacgacgacgatgactctaatgctccttctgcttaaaaccagtcatgcaactcttcaaatcgatcggcatcaataatcaataatgcaggcacccgtgctatcgatttcactatttaccgctacattttctttaagtgatttatgtactcttgtactattgtttatgtttagtgtgagaagacatcaagacatgcatcatgcgtgtatatatttactggaataaaacacgagttatatgaac</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0215500, RefSeq:Os06g0215500