Os06g0215600

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Revision as of 09:09, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0215600| Description = Similar to Oxo-phytodienoic acid reductase| Version = NM_001063675.1 GI:115467081 GeneID:4340485| Length = 1574 bp| ...")
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Gene Name

Os06g0215600

Description

Similar to Oxo-phytodienoic acid reductase

Version

NM_001063675.1 GI:115467081 GeneID:4340485

Length

1574 bp

Definition

Oryza sativa Japonica Group Os06g0215600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:5883569..5885142

Sequence Coding Region

5883784..5884562,5884703..5885048

Expression

GEO Profiles:Os06g0215600

Genome Context

<gbrowseImage1> name=NC_008399:5883569..5885142 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:5883569..5885142 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtcaaccaagccgcgatgccgctgctgacaccgtacaagcaggctggcggcaagatcgatctctcccaccgtgtgctgctctcgccgatgacgcggtgccgatcctacggcaacgtgccgcagccgcacgcggcgctgtactacacgcagcgcgccaccagcggcggcctcctcatcacggaggccaccggcgtctccgacaccgcgcagggctacccggagacacccggcgtctggacgcgggagcacgtcgaggcgtggaagcccatcgtcgacgccgtccaccgcaagggcgccctcttcatctgccagctctggcacgtcgggagagtctccaccaacgactaccagccaaatgggcaggcaccgatctcaagctccgacatacagatcacaccggacggttcagggatcgtgtactccaagcctcgccggctgcgggtcgacgagatccctcagatcgtcgacgacttcaggctcgccgcgcggaacgccatcgaggccgggttcgacggcgtggagatccacggcgccaacggctacctcctcgagcagttcatgaaggacagctccaacgaccgcaccgacgagtacggcggcagcctcgagaaccggtgccgcttcgccgtcgaggtgatcgacgccgtcgtcggcgagatcggcgcccaccgcgtcggcatcaggctgtcgccgttcctggacttcatggactgcgtcgactccgacccggaggctctcggctcgtacatggtggagcagctcaacaagcacgagggtttcctctactgccacatggtggagcctcgcatggccatcgtcgacggccgccggcagattcagcacggcctgctgccattcaggaaagctttcaagggcacgttcatcgccgccggtgggtatgaccgggaggaaggcaacaaggtgatcgaaaatggctacactgatcttgtctcctttggaaggcttttcttggcgaaccctgacttgcctaagaggttcgagcttgatgcgccattgaacaagtatgatcgcaacaccttctacactcaagacccaattgttggatacacggactaccctttcctcgatgaggatcagaacaactcggttgctgatgcttag</cdnaseq>

Protein Sequence

<aaseq>MVNQAAMPLLTPYKQAGGKIDLSHRVLLSPMTRCRSYGNVPQPH AALYYTQRATSGGLLITEATGVSDTAQGYPETPGVWTREHVEAWKPIVDAVHRKGALF ICQLWHVGRVSTNDYQPNGQAPISSSDIQITPDGSGIVYSKPRRLRVDEIPQIVDDFR LAARNAIEAGFDGVEIHGANGYLLEQFMKDSSNDRTDEYGGSLENRCRFAVEVIDAVV GEIGAHRVGIRLSPFLDFMDCVDSDPEALGSYMVEQLNKHEGFLYCHMVEPRMAIVDG RRQIQHGLLPFRKAFKGTFIAAGGYDREEGNKVIENGYTDLVSFGRLFLANPDLPKRF ELDAPLNKYDRNTFYTQDPIVGYTDYPFLDEDQNNSVADA</aaseq>

Gene Sequence

<dnaseqindica>581..1359#95..440#atcacaaccaaaagcgttcatcaagaagtcaagcagagcaaagttcagaagcaagcaagagagaggcagaagcgttgagaaaggccgaggcgagatggtcaaccaagccgcgatgccgctgctgacaccgtacaagcaggctggcggcaagatcgatctctcccaccgtgtgctgctctcgccgatgacgcggtgccgatcctacggcaacgtgccgcagccgcacgcggcgctgtactacacgcagcgcgccaccagcggcggcctcctcatcacggaggccaccggcgtctccgacaccgcgcagggctacccggagacacccggcgtctggacgcgggagcacgtcgaggcgtggaagcccatcgtcgacgccgtccaccgcaagggcgccctcttcatctgccagctctggcacgtcgggagagtctccaccaacggtaaacactcgtcaaacgcgcatgaatgttttatgttcgtgttcataaattaatttcttagcattaccatgtaatttagtaacgatcatcattagtcgatagtgttctaattctgctcttgaatttactttgcaaaacagactaccagccaaatgggcaggcaccgatctcaagctccgacatacagatcacaccggacggttcagggatcgtgtactccaagcctcgccggctgcgggtcgacgagatccctcagatcgtcgacgacttcaggctcgccgcgcggaacgccatcgaggccgggttcgacggcgtggagatccacggcgccaacggctacctcctcgagcagttcatgaaggacagctccaacgaccgcaccgacgagtacggcggcagcctcgagaaccggtgccgcttcgccgtcgaggtgatcgacgccgtcgtcggcgagatcggcgcccaccgcgtcggcatcaggctgtcgccgttcctggacttcatggactgcgtcgactccgacccggaggctctcggctcgtacatggtggagcagctcaacaagcacgagggtttcctctactgccacatggtggagcctcgcatggccatcgtcgacggccgccggcagattcagcacggcctgctgccattcaggaaagctttcaagggcacgttcatcgccgccggtgggtatgaccgggaggaaggcaacaaggtgatcgaaaatggctacactgatcttgtctcctttggaaggcttttcttggcgaaccctgacttgcctaagaggttcgagcttgatgcgccattgaacaagtatgatcgcaacaccttctacactcaagacccaattgttggatacacggactaccctttcctcgatgaggatcagaacaactcggttgctgatgcttagattttgtgctattttagttgttggttctatatatccacaataataatgtgcacgattcatgtaaacagtgttagtatatgcctgcgtgcaagatgtcattttcttctctcttttttgatggtttatgtctgcaactaattcattttgatatttgattagttatgcatccaaatatattgggattaataaacgcagatgtattcacaccacatgag</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0215600, RefSeq:Os06g0215600