Os06g0215900

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Revision as of 09:09, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0215900| Description = Similar to Oxo-phytodienoic acid reductase| Version = NM_001063676.1 GI:115467083 GeneID:4340486| Length = 1437 bp| ...")
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Gene Name

Os06g0215900

Description

Similar to Oxo-phytodienoic acid reductase

Version

NM_001063676.1 GI:115467083 GeneID:4340486

Length

1437 bp

Definition

Oryza sativa Japonica Group Os06g0215900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:5893912..5895348

Sequence Coding Region

5894001..5894779,5894906..5895112,5895131..5895269

Expression

GEO Profiles:Os06g0215900

Genome Context

<gbrowseImage1> name=NC_008399:5893912..5895348 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:5893912..5895348 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgcgcgaggcggagaaggacgcggcggcggcggcggagatcccgctgctgacgccgtacaagatggggcggttcgagctctcccaccgtgtggtgctcgcgccgctcacgcggaaccgctcctacggcaacgtgctgtactacacgcagcgcgccaccagcggcggcctcctcgtcacggaggccaccggcgtctccgacaccgcgcagggctacccggacacccccggcatctggacgcagcagcaggtcgaggcgtggaagcccatcgtcgacgccgtccaccgcaagggcgccctcttcatctgccagctctggcacgtcggcagggtctccaccaacgaataccaacctgacgggcaggcgcccatctcaagcacagacaggcagatcacaccggacgattcaggcatcgtctactcgaaaccccgacggctgaggacggaggagatccctcagatcatcgacgacttcaggcgagccgcgcggaacgccatcgaggccgggttcgacggcgtggagatccacggcgcgcacggctacctcctggagcagttcatgaaggacagcgccaacgaccgcagcgacgagtacggtggcagcctcgagaaccggtgccgcttcgttgtcgaggtgatcgacgccatcgtcgccgaggttggagcgcaccgtgtggggatcaggctgtcaccgttcatcgactatatggactgcgtcgactccgacccggtggctctcggctcgtacatggtgcagcagctcaacaagcacccggggtttctctactgccacatggtggagccaagaatggccatcgtggaaggacgcaggaagatcacccatggcctcctgccattccggaagctgttcaatggcactttcatcgctgccggaggatacgatcgggaggaaggaaacaaggtgatagccgatggatatgctgacctcgtcgcctacgggaggcacttcttggccaatccggacttgcccaagaggttcgcgatcaacgcaccattgaacaagtataataggtccaccttttacatacaggatcctgttgttggctacacggactatcctttccttgatgagaaagacgagggcgctgctacttatgcttaa</cdnaseq>

Protein Sequence

<aaseq>MAREAEKDAAAAAEIPLLTPYKMGRFELSHRVVLAPLTRNRSYG NVLYYTQRATSGGLLVTEATGVSDTAQGYPDTPGIWTQQQVEAWKPIVDAVHRKGALF ICQLWHVGRVSTNEYQPDGQAPISSTDRQITPDDSGIVYSKPRRLRTEEIPQIIDDFR RAARNAIEAGFDGVEIHGAHGYLLEQFMKDSANDRSDEYGGSLENRCRFVVEVIDAIV AEVGAHRVGIRLSPFIDYMDCVDSDPVALGSYMVQQLNKHPGFLYCHMVEPRMAIVEG RRKITHGLLPFRKLFNGTFIAAGGYDREEGNKVIADGYADLVAYGRHFLANPDLPKRF AINAPLNKYNRSTFYIQDPVVGYTDYPFLDEKDEGAATYA</aaseq>

Gene Sequence

<dnaseqindica>570..1348#237..443#80..218#atcggactcggagcaaaacacaatagaggagcagagcagagcacagtgagctagtagcagaggccacactagcgttgagatggcgcgcgaggcggagaaggacgcggcggcggcggcggagatcccgctgctgacgccgtacaagatggggcggttcgagctctcccaccgtgtggtgctcgcgccgctcacgcggaaccgctcctacggcaacgtgccgcggccgcacgcggtgctgtactacacgcagcgcgccaccagcggcggcctcctcgtcacggaggccaccggcgtctccgacaccgcgcagggctacccggacacccccggcatctggacgcagcagcaggtcgaggcgtggaagcccatcgtcgacgccgtccaccgcaagggcgccctcttcatctgccagctctggcacgtcggcagggtctccaccaacggtatgtactccttcacatagttaagctgctggcaattgattcataggtttttgttgagtttttggtttcttgcaaattgttctctttggctgattgaattgcaaaccatgaattaattaccaacagaataccaacctgacgggcaggcgcccatctcaagcacagacaggcagatcacaccggacgattcaggcatcgtctactcgaaaccccgacggctgaggacggaggagatccctcagatcatcgacgacttcaggcgagccgcgcggaacgccatcgaggccgggttcgacggcgtggagatccacggcgcgcacggctacctcctggagcagttcatgaaggacagcgccaacgaccgcagcgacgagtacggtggcagcctcgagaaccggtgccgcttcgttgtcgaggtgatcgacgccatcgtcgccgaggttggagcgcaccgtgtggggatcaggctgtcaccgttcatcgactatatggactgcgtcgactccgacccggtggctctcggctcgtacatggtgcagcagctcaacaagcacccggggtttctctactgccacatggtggagccaagaatggccatcgtggaaggacgcaggaagatcacccatggcctcctgccattccggaagctgttcaatggcactttcatcgctgccggaggatacgatcgggaggaaggaaacaaggtgatagccgatggatatgctgacctcgtcgcctacgggaggcacttcttggccaatccggacttgcccaagaggttcgcgatcaacgcaccattgaacaagtataataggtccaccttttacatacaggatcctgttgttggctacacggactatcctttccttgatgagaaagacgagggcgctgctacttatgcttaatcctcaattaaattgtcaaattgaaatgttcggtttagtaatgtgcactatatttgtgatacactcataagtgaccctcacttccatcc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0215900, RefSeq:Os06g0215900