Os06g0216000

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Revision as of 09:09, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0216000| Description = Similar to Oxo-phytodienoic acid reductase| Version = NM_001063677.2 GI:297605397 GeneID:4340487| Length = 1815 bp| ...")
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Gene Name

Os06g0216000

Description

Similar to Oxo-phytodienoic acid reductase

Version

NM_001063677.2 GI:297605397 GeneID:4340487

Length

1815 bp

Definition

Oryza sativa Japonica Group Os06g0216000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:5898564..5900378

Sequence Coding Region

5898564..5899345,5899921..5900342,5900365..5900378

Expression

GEO Profiles:Os06g0216000

Genome Context

<gbrowseImage1> name=NC_008399:5898564..5900378 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:5898564..5900378 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcagccggttggctgcactcaccctcagtcgccatgcgccaccgtgctcgccctcagccctcttgagttggagggcacctgcaaggcgggagaagaggctgcggagacagggggccggacggaggaggcggactactcacagaatggggtggcgccgaggagattggcttccggcggcgcgcgtgaaggcggtcgaggcgggagaagaggcggcggagatcgggggcggggcgtgcgtggaggcggtcgacgagccggagattgggtcgtagtgtgccttcatcagctgccagcctgccctcaccctcagccgccatgcgccggcgaggcgggagaagaggaggcgaagatttggtgcggggcggaggaggcggacgcgaaggaaacagagatgggagacggcgttgagagggagagaaaatcgggggaaagggatcaacagccgaatgggcaggcgccgatctcaagcacagacaagcagatcacaccggacgattcacacacggtgtactccaagccccggcggctgcggacggatgagatccctcacgtcgtcgacgatttcagggtggctgcgcggaacgccatcgaggcggggttcgacggcgtggagatccacggcgcgcatggctacctcatcgatcagttcatgaaggacagcgccaacggccggaccgaccagtacggtggcagcctcgagaaccgttgccgcttcgccgtcgaggtgatcgacgccgtcgtcgccgaggtgggagctgaccgtgttgggatcagattgtcgccatatatagattttatggactgcttcgactcgaaccccgaagctctcggctcatacatggtgcggcaactcaacaagcacccagagctcctctactgccacatggtggagccgaggatggccaccgtcgaaggacggaggaagatcaaccatggcctcctgccatttcggaagcaattcaatggcactttcattgcctccggagggtatgaccgggaggaagggaacaaggtggtggatgatggctatgccgacctcgtcgcctatgggaggctcttcttggccaaccccgacttgccaaggaggttcgagcttaatgcaccgttaaacaagtatgatggatctacattttacacacatgatcccgtcgttggctacacggattaccctttccttgaggagaagaaagaggactcagctacagtaattgtttga</cdnaseq>

Protein Sequence

<aaseq>MQPVGCTHPQSPCATVLALSPLELEGTCKAGEEAAETGGRTEEA DYSQNGVAPRRLASGGAREGGRGGRRGGGDRGRGVRGGGRRAGDWVVVCLHQLPACPH PQPPCAGEAGEEEAKIWCGAEEADAKETEMGDGVERERKSGERDQQPNGQAPISSTDK QITPDDSHTVYSKPRRLRTDEIPHVVDDFRVAARNAIEAGFDGVEIHGAHGYLIDQFM KDSANGRTDQYGGSLENRCRFAVEVIDAVVAEVGADRVGIRLSPYIDFMDCFDSNPEA LGSYMVRQLNKHPELLYCHMVEPRMATVEGRRKINHGLLPFRKQFNGTFIASGGYDRE EGNKVVDDGYADLVAYGRLFLANPDLPRRFELNAPLNKYDGSTFYTHDPVVGYTDYPF LEEKKEDSATVIV</aaseq>

Gene Sequence

<dnaseqindica>1034..1815#37..458#1..14#atgcagccggttgggttcgtcatgtggcgtcgtcagctgcactcaccctcagtcgccatgcgccaccgtgctcgccctcagccctcttgagttggagggcacctgcaaggcgggagaagaggctgcggagacagggggccggacggaggaggcggactactcacagaatggggtggcgccgaggagattggcttccggcggcgcgcgtgaaggcggtcgaggcgggagaagaggcggcggagatcgggggcggggcgtgcgtggaggcggtcgacgagccggagattgggtcgtagtgtgccttcatcagctgccagcctgccctcaccctcagccgccatgcgccggcgaggcgggagaagaggaggcgaagatttggtgcggggcggaggaggcggacgcgaaggaaacagagatgggagacggcgttgagagggagagaaaatcgggggaaaggggtgtgtgtgcgcgccgcgtgcgatcgacgatgcgtggggcgcgtgcggaagattgaattgtgatctgatctgttggattcaagaccacgaggaggcgacgcagggaggagggcgaaggacgcggcgtggggaaaggagtgggcgtggcgcgtgatgaggagaggagcgatgggaggagatttgacgccattggatatgaaaatcggatggttgagattagacgtgtttgttagatgcgtctgctatgtcagaaatcaagaccaccactacagattttttaagtagtagagaaaatgagatttgctctagtccaacaaaaaatatcttaaggtagcagtacctcacgatatcaaatcattttttgatcgttggatctaacaatatctatcatgctcaattagatccaacaatcggaggtgatttagtattgtgaagtaccggtacctcgaggtttttttttttttttgaccggagcaaatctcactctatattgctgatgattgatctatcaatataaggtctttgcaaattgtgctttgttgattgattcgattaattgcgacatgaaccaacagatcaacagccgaatgggcaggcgccgatctcaagcacagacaagcagatcacaccggacgattcacacacggtgtactccaagccccggcggctgcggacggatgagatccctcacgtcgtcgacgatttcagggtggctgcgcggaacgccatcgaggcggggttcgacggcgtggagatccacggcgcgcatggctacctcatcgatcagttcatgaaggacagcgccaacggccggaccgaccagtacggtggcagcctcgagaaccgttgccgcttcgccgtcgaggtgatcgacgccgtcgtcgccgaggtgggagctgaccgtgttgggatcagattgtcgccatatatagattttatggactgcttcgactcgaaccccgaagctctcggctcatacatggtgcggcaactcaacaagcacccagagctcctctactgccacatggtggagccgaggatggccaccgtcgaaggacggaggaagatcaaccatggcctcctgccatttcggaagcaattcaatggcactttcattgcctccggagggtatgaccgggaggaagggaacaaggtggtggatgatggctatgccgacctcgtcgcctatgggaggctcttcttggccaaccccgacttgccaaggaggttcgagcttaatgcaccgttaaacaagtatgatggatctacattttacacacatgatcccgtcgttggctacacggattaccctttccttgaggagaagaaagaggactcagctacagtaattgtttga</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0216000, RefSeq:Os06g0216000