Os06g0216200

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Revision as of 09:10, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0216200| Description = Similar to Oxo-phytodienoic acid reductase| Version = NM_001063679.1 GI:115467089 GeneID:4340489| Length = 1229 bp| ...")
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Gene Name

Os06g0216200

Description

Similar to Oxo-phytodienoic acid reductase

Version

NM_001063679.1 GI:115467089 GeneID:4340489

Length

1229 bp

Definition

Oryza sativa Japonica Group Os06g0216200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:5912058..5913286

Sequence Coding Region

5912058..5912839,5912938..5913286

Expression

GEO Profiles:Os06g0216200

Genome Context

<gbrowseImage1> name=NC_008399:5912058..5913286 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:5912058..5913286 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgcacgcacctgcgaaagaggcgatcccgctgctgacgccgtacaagatggggcagctggagctgtcccaccgggtggtgctcgcgccgctgacgcggtgccgctcctacggccacgtgccgcagccgcacgccgcggtgtactactcgcagcgcgccaccaacggcggactcctcatcgcggaggccactgtcatctcccccaccgcgcagggctacccggacacccccggcatctacacgcagcagcagatcgaagcgtggaaacccatcgtcgacgccgtccaccgcaagggcgccctcttcttcctacagatatggcacgtcggcagggtctccaccacagatttccagccaaatggacaggcgccgatctcgagcaccgataagcagatcacaccggacgattcaggcatggtgtactccaagccccggcggctccggacagacgagatccctcagatcgtcgacgacttcaggcgagccgcgcggaacgccatcgagtcggggttcgacggcgtggagatccatggcgcgcacggctacctcctcgaccagttcatgaaggacagcgccaacgaccgcaccgacgagtacggtggcaacctcgagaaccggtgccgcttcgccgtcgaggtgatcgatgccgtcgtcgccgaggtgggagcgcaccgtgttggaatcagattatcgccattcgacaactacatggactgcttcgactccaacccggtagctctcggctcatacatggtgcagcaactcaacaagcacccaggctttctctactgccacatggtggagccaggaatggccatcgtcgaaggacggaggaagatcacccatggtctcctgccattcaggaagcagttcaatggcactttcatcgctgctggcgggtatgaccgggaggaagggaacaaggtggtggctgatggctatgccgatctcgtcgcctacgggaggctcttcttggctaaccctgacttgccgaggaggtttgagcttgacgcaccattgaacaggtatgacaggtctaccttttatacacaggatcccgttgttggttatacagattacccttttcttgaggagattgatgaggagtcaacaactacctatgcttaa</cdnaseq>

Protein Sequence

<aaseq>MVHAPAKEAIPLLTPYKMGQLELSHRVVLAPLTRCRSYGHVPQP HAAVYYSQRATNGGLLIAEATVISPTAQGYPDTPGIYTQQQIEAWKPIVDAVHRKGAL FFLQIWHVGRVSTTDFQPNGQAPISSTDKQITPDDSGMVYSKPRRLRTDEIPQIVDDF RRAARNAIESGFDGVEIHGAHGYLLDQFMKDSANDRTDEYGGNLENRCRFAVEVIDAV VAEVGAHRVGIRLSPFDNYMDCFDSNPVALGSYMVQQLNKHPGFLYCHMVEPGMAIVE GRRKITHGLLPFRKQFNGTFIAAGGYDREEGNKVVADGYADLVAYGRLFLANPDLPRR FELDAPLNRYDRSTFYTQDPVVGYTDYPFLEEIDEESTTTYA</aaseq>

Gene Sequence

<dnaseqindica>448..1229#1..349#atggtgcacgcacctgcgaaagaggcgatcccgctgctgacgccgtacaagatggggcagctggagctgtcccaccgggtggtgctcgcgccgctgacgcggtgccgctcctacggccacgtgccgcagccgcacgccgcggtgtactactcgcagcgcgccaccaacggcggactcctcatcgcggaggccactgtcatctcccccaccgcgcagggctacccggacacccccggcatctacacgcagcagcagatcgaagcgtggaaacccatcgtcgacgccgtccaccgcaagggcgccctcttcttcctacagatatggcacgtcggcagggtctccaccacaggttcgtccacttgctggtggttggttgattttttttcaaaggtcattgcaaattgtgctcgttggttgattaattaaatttcgaaatgaaatcgacagatttccagccaaatggacaggcgccgatctcgagcaccgataagcagatcacaccggacgattcaggcatggtgtactccaagccccggcggctccggacagacgagatccctcagatcgtcgacgacttcaggcgagccgcgcggaacgccatcgagtcggggttcgacggcgtggagatccatggcgcgcacggctacctcctcgaccagttcatgaaggacagcgccaacgaccgcaccgacgagtacggtggcaacctcgagaaccggtgccgcttcgccgtcgaggtgatcgatgccgtcgtcgccgaggtgggagcgcaccgtgttggaatcagattatcgccattcgacaactacatggactgcttcgactccaacccggtagctctcggctcatacatggtgcagcaactcaacaagcacccaggctttctctactgccacatggtggagccaggaatggccatcgtcgaaggacggaggaagatcacccatggtctcctgccattcaggaagcagttcaatggcactttcatcgctgctggcgggtatgaccgggaggaagggaacaaggtggtggctgatggctatgccgatctcgtcgcctacgggaggctcttcttggctaaccctgacttgccgaggaggtttgagcttgacgcaccattgaacaggtatgacaggtctaccttttatacacaggatcccgttgttggttatacagattacccttttcttgaggagattgatgaggagtcaacaactacctatgcttaa</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0216200, RefSeq:Os06g0216200