Os06g0218200

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Revision as of 09:10, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0218200| Description = The start codon is not identified.| Version = NM_001063690.1 GI:115467111 GeneID:4340501| Length = 4028 bp| Definit...")
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Gene Name

Os06g0218200

Description

The start codon is not identified.

Version

NM_001063690.1 GI:115467111 GeneID:4340501

Length

4028 bp

Definition

Oryza sativa Japonica Group Os06g0218200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:6045736..6049763

Sequence Coding Region

6046135..6046282,6046364..6046594,6046668..6047836

Expression

GEO Profiles:Os06g0218200

Genome Context

<gbrowseImage1> name=NC_008399:6045736..6049763 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:6045736..6049763 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gggggctgtagaccctacattagcatagattctactgcccttaatggatattggaatggacacatgcctgcagccaatgcattagatggacacaattggatgtttcctttggcatttggtttttttgattcagagaccaaagagaactgggtttggtttatggagcagctagccaatgcaattggtccagttccaaaattagctatccacactgatgcatgtaaagggttggaaactgcagttcacaaggtatttccatgggcagaacagagggagtgtatgaggcatttgatggagaacatgaagaaattatttcatgggtctatctatgcgaggaagatgtggcctgcagctaagacttacatgcttgagaagcatgacaagtggatggatgaagtgacaacagctagtccagaggtgaaacaatggcttaaagaatatcacaacctactgtgggccagaagcaagtttgattgtgctataaagtgtgactacatcaacaataacctggcagagtcatggaacagttggatcaaagacttgaaggatttgcctgttgatgctcttgcagatgccattagggagaaaactttgatcttgtttgagaagaggaggaggatctctacagctctcaatggagtgattcttcctgttgtcatccatcagttgaatgaagcctcaaaaggtttaggccatctgaaggttactaaaggaaatcctgaccaagcagaagttacagagacatacaaggatgaggaagtgactaggcatgtggtgtaccttgataagtggacatgtacatgcagggaatggcaggtcactgggaagccctgcccacatgcattggcactgatcacaacaattaggcagccaaatatggagaaatatgttgacacagcttactctgtgcacagatttcaggtagcatatgcaagtgttatccctaacatcacagacaagaagcagtggccaaaagttgataaaggtttcaagctcctgccacccgttcccaagaagagaggagtgggtaggcagagaaagaataggatcccatctgctcttgaaaagggcaaaggaaaggccacaaggcaagttcaatgtccagactaccaacggtttggacataggaagggtagtataagatgtgaactgactggaactaggaagaggaagaaaaacaacaagacaaaaacaaatgtgggaaggaagaaagcaaagggtgccattgatgcccaagctgctgcagttgatgttcaagcgaatacgccaagaacaagagctgctgcagttgatgttcaagcgaatacaccaagaacaagagcagctgtagcaaaagaagcagctgcagaatcacaagtgcatgcaacacaaacaagcagtcctggaccaatcactaggaggaggctggcattagaggttggtcaaagctccgttgaagtagcacttgtacccgtgcaggtgcaagcggcagtacagccaaccaagaaattcacaccaaggaaaaaactagctagcaagccaaaaaggcatcaccaccaaagcttctga</cdnaseq>

Protein Sequence

<aaseq>GGCRPYISIDSTALNGYWNGHMPAANALDGHNWMFPLAFGFFDS ETKENWVWFMEQLANAIGPVPKLAIHTDACKGLETAVHKVFPWAEQRECMRHLMENMK KLFHGSIYARKMWPAAKTYMLEKHDKWMDEVTTASPEVKQWLKEYHNLLWARSKFDCA IKCDYINNNLAESWNSWIKDLKDLPVDALADAIREKTLILFEKRRRISTALNGVILPV VIHQLNEASKGLGHLKVTKGNPDQAEVTETYKDEEVTRHVVYLDKWTCTCREWQVTGK PCPHALALITTIRQPNMEKYVDTAYSVHRFQVAYASVIPNITDKKQWPKVDKGFKLLP PVPKKRGVGRQRKNRIPSALEKGKGKATRQVQCPDYQRFGHRKGSIRCELTGTRKRKK NNKTKTNVGRKKAKGAIDAQAAAVDVQANTPRTRAAAVDVQANTPRTRAAVAKEAAAE SQVHATQTSSPGPITRRRLALEVGQSSVEVALVPVQVQAAVQPTKKFTPRKKLASKPK RHHHQSF</aaseq>

Gene Sequence

<dnaseqindica>3482..3629#3170..3400#1928..3096#gttcgaccgccagccaccatcgacgggcgacgccgtgccgtcgacccctgcccgccccgcgtcggccccgcgccgtcgacgccggcccggcgcgcgacatcgacgcccgtcccgcgccatcggcccctgctcgcccagcgtcggccccgggccgtcgacgcgccgcccggcccgccggctcaccgccccacgccggtcctgacgttctccacccgcagtccgccgtcgacgcatttgtcagatccgcagctccggcatcatcccggcatttgttcttccccaacagcacatcgtgacctggtagggcatcgtcgccatcgtcctccggcggcgatgaagccctcagtttgtccttcttggtaagttcattttctcccttgccctccctgcttgtattgtgttgcatgcatggagttagatgtgttctaactccattttttttatgaatctgtttatgtcaggattgatcctggcaatgcgcttagatttcttgttagggttgctaagtatgttgcgaatctagagtatggaatgctaccaatgtcagagcaagactatgattggtgggttgatattagcagtgggtataatttggataaatttcatgatgaaatggctagcaagataatctgggggccaagccaagaaattagagtttggggtttggacactgaaattggcactgaatgtaagttgacaaccaatgaagaatttggccagtggatgaattctatgttggatgataagctggtagagtttggtgttgaagttatttataaaaagggatatgaacctattgaaggcattgcaaatccagttgattcagctattcaaggtgtctctggtgtggtaactgcagatccaattgatcagtcaagtgctcaagttctctctgctatgattagtgctgaagtttcttctcctggtcatgaagaagggacgggtgatacctctagccatccacaaaatgcagaagaggctaatgctgttgtagattggagtaagttggctatacttgttgaacctgagcaagattgtgatgttaatttattgttggatgaggatcaagtttttgaggccatgggcttcaaagcagcagatcagagagcagcagctgctgcagcagctatggaagaaactgcaattcctattattccaaccgagattcagcaagacatgttagatgcagccattgtagtggacgatgaagtacccattgatgtgttggattgggacagggatgacccagatatgtcagtggggacattttacccttctatggatgagttcagaatggcaatgaagcaatatgccattgttcatgagtttgaactagagactgaaaattctgacaaagaaaggtttagagggaaatgccatgcaattggttgcccatggataattagagcaaagacccaacctaataagagtgtcagggtattatactaaccatttaaattacctttgcaatttgacaccttgcttgctgaattcagattggagtaacttttgcatagttgctaatattgtttgcttttgcaggtccaaataaacaaatatgatcacaagtgtgcttcaagaagcagagttcgtggaaggatggcatctcaagcttgggttgctgagagggcaattccatttctcaacaagaagaatgggatgggtccaaaggaacttcagaaggagctgcaggacacctacaagataaccataccttatcatacagtttatcatggtaggaagagggcaacagacaaattatttggtaagtggtctgattcatttgattggttgtataggttcaaggcagaggtggaaatgaggtccccaggtagtgtagttgagatagacacagttaaaattggagataaggttcacttcaatagattcttttgtgcatttaaagcatcaattgatggtttcttaggggggctgtagaccctacattagcatagattctactgcccttaatggatattggaatggacacatgcctgcagccaatgcattagatggacacaattggatgtttcctttggcatttggtttttttgattcagagaccaaagagaactgggtttggtttatggagcagctagccaatgcaattggtccagttccaaaattagctatccacactgatgcatgtaaagggttggaaactgcagttcacaaggtatttccatgggcagaacagagggagtgtatgaggcatttgatggagaacatgaagaaattatttcatgggtctatctatgcgaggaagatgtggcctgcagctaagacttacatgcttgagaagcatgacaagtggatggatgaagtgacaacagctagtccagaggtgaaacaatggcttaaagaatatcacaacctactgtgggccagaagcaagtttgattgtgctataaagtgtgactacatcaacaataacctggcagagtcatggaacagttggatcaaagacttgaaggatttgcctgttgatgctcttgcagatgccattagggagaaaactttgatcttgtttgagaagaggaggaggatctctacagctctcaatggagtgattcttcctgttgtcatccatcagttgaatgaagcctcaaaaggtttaggccatctgaaggttactaaaggaaatcctgaccaagcagaagttacagagacatacaaggatgaggaagtgactaggcatgtggtgtaccttgataagtggacatgtacatgcagggaatggcaggtcactgggaagccctgcccacatgcattggcactgatcacaacaattaggcagccaaatatggagaaatatgttgacacagcttactctgtgcacagatttcaggtagcatatgcaagtgttatccctaacatcacagacaagaagcagtggccaaaagttgataaaggtttcaagctcctgccacccgttcccaagaagagaggagtgggtaggcagagaaagaataggatcccatctgctcttgaaaagggcaaaggaaaggccacaaggcaagttcaatgtccagactaccaacggtttggacataggaagggtagtataagatgtgaactgactggaactaggaagaggttagttcagctatgatttactttcttttagttattgtacaatgtattgcttaagctaaccaatgttttgcaggaagaaaaacaacaagacaaaaacaaatgtgggaaggaagaaagcaaagggtgccattgatgcccaagctgctgcagttgatgttcaagcgaatacgccaagaacaagagctgctgcagttgatgttcaagcgaatacaccaagaacaagagcagctgtagcaaaagaagcagctgcagaatcacaagtgcatgcaacacaaacaagcagtcctggaccaatcactaggaggtaaggcataattgtgttgtttttcatttcatttcacttaactttggttcatgtcttgcttacacccatcaaaaacaacaggaggctggcattagaggttggtcaaagctccgttgaagtagcacttgtacccgtgcaggtgcaagcggcagtacagccaaccaagaaattcacaccaaggaaaaaactagctagcaagccaaaaaggcatcaccaccaaagcttctgaaataaaatgtgtcaatctgctatcaatctgcaagtattttgctatgtatggctgaaatgcgtcaatctgcaagtattttgctatttatgtctgaaatcgtcaatctcgaagtaatatgaacttctaatgtgcatggcctgatgatgtatttttgcttttgtaatgatgtatgccatgatgaacctgttatatggcaccctaaacctgttatatatagaccattgtatggtctgatggccctgatggacctgttatatgtatagaccaatgtatggtctgatggacctgttatgcatggcctgcttttgtaatgatgtgtggcctacaatgaacctatgaattgtatggttgatgaattaagatatttggatgggacgtgatgaattaaggcacttctgc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0218200, RefSeq:Os06g0218200