Os06g0219600

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Revision as of 09:10, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0219600| Description = Similar to Poly(A)-binding protein II-like| Version = NM_001063698.1 GI:115467127 GeneID:4340509| Length = 3902 bp| ...")
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Gene Name

Os06g0219600

Description

Similar to Poly(A)-binding protein II-like

Version

NM_001063698.1 GI:115467127 GeneID:4340509

Length

3902 bp

Definition

Oryza sativa Japonica Group Os06g0219600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:6154941..6158842

Sequence Coding Region

6155045..6155137,6155258..6155357,6156753..6156823,6158057..6158248,6158352..6158470
,6158578..6158617

Expression

GEO Profiles:Os06g0219600

Genome Context

<gbrowseImage1> name=NC_008399:6154941..6158842 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:6154941..6158842 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggacgaggagcacgaggtgtacggacaggagatccccctcgacggggaggacgtcgacatgggcgcccccggcgacgaggccgccaagatgcaggagctcgacgagatgaagcggaggctcaaggagatggaggaggaggccaacgcgctccgcgagatgcagaccaaggtcgccaaggagatgcaaggtctggatcctaatgcgtcctcatctgaatcaaaagaggaaatggacgctcggtcggtatatgttggaaacgttgactatgcatgcaccccagaggaagtccagcagcattttaattcctgtggaacggtcaacagggtgacaatcctgacagacaagtttgggcaaccaaaaggtttcgcttatgttgaattccttgaagtagaagctgttcaggaagctgttaagttgaacgaatcagaactgcatggtcgccaaatcaaggtggcgccaaagaggactaacgtccctgggatgaagcagccccgcggaggcagaggattcggtggtcatccttatatgaggccatatggagcaccattttacaatccctatggttatggataccccagattccgccgtccacgcaggccatacttttga</cdnaseq>

Protein Sequence

<aaseq>MADEEHEVYGQEIPLDGEDVDMGAPGDEAAKMQELDEMKRRLKE MEEEANALREMQTKVAKEMQGLDPNASSSESKEEMDARSVYVGNVDYACTPEEVQQHF NSCGTVNRVTILTDKFGQPKGFAYVEFLEVEAVQEAVKLNESELHGRQIKVAPKRTNV PGMKQPRGGRGFGGHPYMRPYGAPFYNPYGYGYPRFRRPRRPYF</aaseq>

Gene Sequence

<dnaseqindica>105..197#318..417#1813..1883#3117..3308#3412..3530#3638..3677#aacaaaggctggtcccgtttctcacttcgcaacactaggctttttgcccgaagcgactcgactctacacccctcaccctaccctaccctagcaacgaggcggccatggcggacgaggagcacgaggtgtacggacaggagatccccctcgacggggaggacgtcgacatgggcgcccccggcgacgaggccgccaaggtatcgtggacgctccacgcccccttcccctctctctctccccccgacctcccggacccccacaaaccctagcttcgtcgatggcttctgaccaccaccacctcccccctggctgcgcagatgcaggagctcgacgagatgaagcggaggctcaaggagatggaggaggaggccaacgcgctccgcgagatgcagaccaaggtcgccaaggagatgcaaggtcagtgctgccgtaccccgtgtgtagagctaccgtttcgtgtagatggtttaatcttgtgaacagtactacggcggttcggggaaattcgagatctgtgatgatgctatggtttacctgttttgacctttcgtgtaggatgtaacttgcttgtgctcatcagcggcttgaatctagctgattgtgtagatgtgctgcagaagtatgacttgtgttttctgttccgcgaaatacatatatggaacaaatggtttgaagagtgataagcggagaggagctatcagtccaacttgtagagcttatgcggaaagtgggcttgtaggcggttttaaggttttcttatttgacatatgaagtatggttgtatatattgtaataagcacatatgttgaacatgcttcatattcttaaacaccagtacaacgcagcatgctaaggtatagacggagatgcatggttgggctagggctatgtgcggtggcgggattatatacaagagttagctagcataatatattaatatgtcatacttgggccttttaagcggccttgtacgaggtaagcaggcagcttatccggatatgcggcccacttagccttgtaaaccccgtagaccaaacttcagttatatttggcaaggccaatggacctagtataatataggcgggtacctacaaggtctgattgttcgccttttaaaacattgatttggaatgtaattttgcttcatgattcgcagttgttctattaatttaataggttgaggtagttttcttatgtttggcatattattatattatttggatggggacttcccaacctaggaaccagagtataaactcgagttcctcattaattttctcaaagtggctgctcgggctttgcaagcaggctaatatgtagaccaggaccttcctgagtaatgctgagcggttaatctacaatgtttacaagctaaccgagctgcttatttggataagcgacctgcttaccatgtacaaggcctatccatgttgaccaacaaagtcccaggcatagttgttcggtaaataaagatggattgattgtccataaataaagatagggtagttgataaattggtgaatatcgggttcctttattggtgtataaagatggtttcagtactctctacatgcctgcttacaaggccgctttctgcataagctctacaaggtggggtgaccgcaccgcactgcataccgctttttagaacactgagtgattgtgtgtaacagaacttacgataaaataatgttttaagttttcattgctgtgtttgggaaaatatctttaaatatggtaacttgaaatttatgattgccacaagattttcttgcatgttctatcacatatctgatcattctacttctgtaggtctggatcctaatgcgtcctcatctgaatcaaaagaggaaatggacgctcggtcggtatatgttggaaacgtaagattttcatatcctttatttactatctaaatctatctgattgatctgttatctgtagtttaagtacctaggtttattattaagatttatattttgcataatgattgcttttcaaactagagataaagttgtcgttatccgatagctcgagaagtcattaaagtgcatttgtgatctttaaagctttcacagaatatcctatcttatttttttttcttatattcagtacatatatatacctcttgctcgtttagtttgttgagctgttccattgctttaaacacacatcattaacaaccctatttatatataacaactaaggaatgcctttgttttcagttaatagtattttccaaaaaaaaaacttttcttctatctttatttatctttttaattttctggtgcattgattgagcgatggcaatgctcgcagggtagtctgctgtcatcaagtctttgaaatcaaaattttggcgcctggttgaatctcaggacaagttatagtgttagcttagtgggggaagaaaaatatcctcaaaagaaaagaaaaagaaaaagaaaaaaaggaaagattttgaaaaaaaaaatttaaaaaggaaaaagaaaaaaaaagagaaaagaaaaaaaaagagaaaaaaagtgataggatgccaccccccaaagttatggcacttgagaatcactggcagggtgcataggtattgtgactgtaagtgcatcttcacatctttgctgttgactcttaaatctgtattgaaagaatattatgtatattatgatgtttattctgttggaattcctcttttattctataatttgtggcttaatattttaccattcaatcagttttgtttgttatctttctcttgttcagtttctttggtttaatatgtcagtgtaatatctttccatcagtccgtaaatccttcaacaaatgatgtctcactgaggtcttggcatagagtaatgattgcacagagggtgaaaattgtgcacaaagatttaagtggcatgcattatgatatgccaatttgtgcacagttttatttatatgtctatactacgatttgtattgcacgcgtctatctactccacaattttcttgatacaaaatctgaactggtactcttatctcttaatgtttggttttgcatgttgatctttcttatgcttattacttagcaatatatgtgccctcaattttttttcctgctgctatgatcactgcaggttgactatgcatgcaccccagaggaagtccagcagcattttaattcctgtggaacggtcaacagggtgacaatcctgacagacaagtttgggcaaccaaaaggtttcgcttatgttgaattccttgaagtagaagctgttcaggaagctgttaagttgaacgaatcagaactgcatggtcgccaaatcaaggtgagatgtgaattcattttagtcaatccaaaatttgctcccttgtttacagccacctatttggcatactgacagtccatccactttgatatactcaaattaggtggcgccaaagaggactaacgtccctgggatgaagcagccccgcggaggcagaggattcggtggtcatccttatatgaggccatatggagcaccattttacaatccctatggttatgggtgagtgagagtttgcactttcttgcttagcaaatactagcaacctcgctgtctttgttctctctgagatagaatcttatgcccagtttgctctctttgcgttgcagataccccagattccgccgtccacgcaggccatacttttgaagctgtcttcgtggagtcttcagcacatgacattagtccaatagcccaaagaatccgtcgttgttgctgtatttcgatacttcatagttagcaactataaagttcgatcactttcttcacagggtgttttttgttgtttaaagatatgtgcaaattcaggcagcagcattatgtactattaacttcgtttatgtggaagtgcgcactattttgggttttggctgc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0219600, RefSeq:Os06g0219600