Os06g0222900

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Revision as of 09:10, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0222900| Description = Similar to Type I inositol-1,4,5-trisphosphate 5-phosphatase 2 (EC 3.1.3.56) (At5PTase2)| Version = NM_001063716.1 GI...")
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Gene Name

Os06g0222900

Description

Similar to Type I inositol-1,4,5-trisphosphate 5-phosphatase 2 (EC 3.1.3.56) (At5PTase2)

Version

NM_001063716.1 GI:115467163 GeneID:4340527

Length

3817 bp

Definition

Oryza sativa Japonica Group Os06g0222900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:6348121..6351937

Sequence Coding Region

6348416..6348644,6348755..6348903,6349009..6349117,6349630..6350460,6351049..6351153
,6351268..6351364,6351487..6351525,6351619..6351661

Expression

GEO Profiles:Os06g0222900

Genome Context

<gbrowseImage1> name=NC_008399:6348121..6351937 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:6348121..6351937 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgtccaacatgttcggcaagaaagggtgggactcgaatgggatggatacatctggttctgtctgcagaagttcttcagatatcaattacattaatcaacgggcaagattgaagagtgcgagcctaaactgtgtgggttcgccgccaaggaagaacaacaatgctacacagtaccggatgtttgttgccacatggaatgtgggaggaagaactcctaataaacgacttaaccttcaagactttctgcaggttgaagaatctcctgacatctacgtcttagggtttcaggagattgtccccctgaccgccggcaatgtgctcgtcctcgaagacaacgagccggcggcgaggtggctggcgctgatccaccaggcgctgaacatgccccaagaaccggccgacggcgacgagccatcgcctttgacgccgccgccgtcgtcgtcgacgacgacgtcggagtcgtcgaacggcgcccggacccggcggcgcgacgccgtgtcgaggtcagccagcggcaacctcttcttccacacgccgtcgctcaagatgctcagcaacagctaccgcgtcgacagcgcgctagtcaagacgtgcaactgctcgccggagcactcctccgtgcgccgccgtgccgcggaggtgcgcgagtccgtgtacctcgccgacgcacccgcgccagccggcgagacggcggcgccagctgccgacgaagacgacgcgccgacgacggaggcgcagtgcgaggcaggatgcggcggcggcggcggcatgagctactgcctgatcgcgagcaagcagatggtggggctcttcctgtcggtgtgggtgaggaaggagctcgtcgagcacgtcggccatctccgggtggactgcgtcgggcgcggcatcatggggtggctcggcaacaagggctgcatcgccatcagcatgacgctgcaccacaccagcctctgcttcgtctgcagccacctcgcctccggcgagaaggaaggcgacgagctgcggcgcaacgccgacgtcgccgagatcctcaagagcgcgcacttcccgcgcgcctgccgcccggcgcccgccgccgcccgccgcgtccccgagaggattcttgaccacgaccgaatgatctggctcggcgatctgaactaccgcatgtcgttaagctacgacgagacaagaacactactggaggacaacgactgggacgctctactggagaaagatcagctgttgatcgagagagaagcggggagagtgttcagaggctggaacgaaggaaagatctgcttcgcgccgacgtacaagtacacgcacaactccgacgcgtacgccggcgagacggccaagtccaagaagaagcggaggacgcccgcatggtgcgaccggatactgtggcagggagacggcatcgagcagcttcagtacctgcgcggagagtcgaggttctccgaccaccggccggtctgcggcgtgttcgccgtcgaggtggacggcggcgatggcgacggcggcggcgccgccggcaagatcatgaagggttactactccctcaacgcccggatcggcggtgacagatcgcagtgtcaccagggtgacgtgtcgtga</cdnaseq>

Protein Sequence

<aaseq>MSSNMFGKKGWDSNGMDTSGSVCRSSSDINYINQRARLKSASLN CVGSPPRKNNNATQYRMFVATWNVGGRTPNKRLNLQDFLQVEESPDIYVLGFQEIVPL TAGNVLVLEDNEPAARWLALIHQALNMPQEPADGDEPSPLTPPPSSSTTTSESSNGAR TRRRDAVSRSASGNLFFHTPSLKMLSNSYRVDSALVKTCNCSPEHSSVRRRAAEVRES VYLADAPAPAGETAAPAADEDDAPTTEAQCEAGCGGGGGMSYCLIASKQMVGLFLSVW VRKELVEHVGHLRVDCVGRGIMGWLGNKGCIAISMTLHHTSLCFVCSHLASGEKEGDE LRRNADVAEILKSAHFPRACRPAPAAARRVPERILDHDRMIWLGDLNYRMSLSYDETR TLLEDNDWDALLEKDQLLIEREAGRVFRGWNEGKICFAPTYKYTHNSDAYAGETAKSK KKRRTPAWCDRILWQGDGIEQLQYLRGESRFSDHRPVCGVFAVEVDGGDGDGGGAAGK IMKGYYSLNARIGGDRSQCHQGDVS</aaseq>

Gene Sequence

<dnaseqindica>3294..3522#3035..3183#2821..2929#1478..2308#785..889#574..670#413..451#277..319#aggctaaccaccctcgacgtttctctccctcgattcacggcaacctctcggagcgtggtcgcagcaacggccgcggcgttggtggcaatggaacgcccaatctccatgcttcttcttgctgtcgaacaccagatcgcaggagacaagaatcaggtgaaatcttgctgcaaaccattggctttttgtgtgtcgattagattgcagaaatgtgcacgctgatcatctgaatttttcttggcgtttttttttgtcatcctgatccagtgagcatgcatcatgtcgtccaacatgttcggcaagaaagggtgggactcgaatggtgagggatagctcatcacttgtgattattcttattgttttcaaagagaatttgttattgagttctaatttggatttgcattatttgcgatagggatggatacatctggttctgtctgcagaagttcttcaggtaatttgatacgacactatgaaccgagaatatgatcatctttgagatcacaaccatgagaaaatgaagaccgatttgagcagtttgttcttttcttttgactaacccatctggattttcagatatcaattacattaatcaacgggcaagattgaagagtgcgagcctaaactgtgtgggttcgccgccaaggaagaacaacaatgctacacagtaccggtaatgtgaaaatgctttctcattttgttctgatctgaatcttgatgtttgcttaataatcctcattgcaaaaggtaacatggtgatcgatgactgaattggaaattcttgcaggatgtttgttgccacatggaatgtgggaggaagaactcctaataaacgacttaaccttcaagactttctgcaggttgaagaatctcctgacatctacgtcttagggtacggaaaaacttgtcctttttctaaaattttctcgttgatatttgtcactttcatatcataaatctttccttggcagcatattacttcggtaaatttctaataaaaaaaaagaaaattgttttaatctctcaaacggacgtcccctcgcttattcaaatactatatattcaaatagttatagaaaatcttagaaaaaattaccaacatttatacaacatacatatactcacttagaaaatcttaagtctaaatttaactcagccatcgagaaattttaaaaaaagagagacaaatctagcgtatgaacagtacctactacctagattatcttttttttttctcaacttgcagatgaatttgaacttgattttagtgtagtcgtagatattgctatacttttcattatcgttttttagtaactttttatgaccatttgcattaaattcgattgaagatgttatatgagggacaatccaatccactcgaggaattagaatccattcgaaaaattgattttgattgtcaacatctttaggcatgtgaggtgtgccaaattctgaatttctgacgatacatgagtactaggtttcaggagattgtccccctgaccgccggcaatgtgctcgtcctcgaagacaacgagccggcggcgaggtggctggcgctgatccaccaggcgctgaacatgccccaagaaccggccgacggcgacgagccatcgcctttgacgccgccgccgtcgtcgtcgacgacgacgtcggagtcgtcgaacggcgcccggacccggcggcgcgacgccgtgtcgaggtcagccagcggcaacctcttcttccacacgccgtcgctcaagatgctcagcaacagctaccgcgtcgacagcgcgctagtcaagacgtgcaactgctcgccggagcactcctccgtgcgccgccgtgccgcggaggtgcgcgagtccgtgtacctcgccgacgcacccgcgccagccggcgagacggcggcgccagctgccgacgaagacgacgcgccgacgacggaggcgcagtgcgaggcaggatgcggcggcggcggcggcatgagctactgcctgatcgcgagcaagcagatggtggggctcttcctgtcggtgtgggtgaggaaggagctcgtcgagcacgtcggccatctccgggtggactgcgtcgggcgcggcatcatggggtggctcggcaacaagggctgcatcgccatcagcatgacgctgcaccacaccagcctctgcttcgtctgcagccacctcgcctccggcgagaaggaaggcgacgagctgcggcgcaacgccgacgtcgccgagatcctcaagagcgcgcacttcccgcgcgcctgccgcccggcgcccgccgccgcccgccgcgtccccgagaggattcttgaccacgagtaagcaaagctaactaaacttcacctccacaatcttacactgacagagtgacaaatataccctcccttcagttcataggacgttttttttttactttggtctaaatcaaactgacaaagtttataaaaaatatagtaacatttttaatcaagataaatttattataaaaatatatttaattatagatttgataaaactaatttagtaatattcctccgtttcacaatataagactttctagcattgttcgtatatatttagatgttaatgaatctagatatatgtatgtgtttggatttattaacatctatatgtatgtgggtaatgttagaaagtcttatattgttaaacgaagagagtacaaatattactatatttgtctataaatttagtcagatttaaaaccgattaactttgactaaagtcaaaacgtcttataatctgaaatggagggacggatggagtactaaaaaatcttggattaattgcttccatttgcaatctcaaccagccgaatgatctggctcggcgatctgaactaccgcatgtcgttaagctacgacgagacaagaacactactggaggacaacgactgggacgctctactggagaaagatcaggtattcacgtgactaaaaaatcttcaatcttccattttcagaatctgaactgctgaatttcttcagacaaaatcgctcaaactctgatcaattgattgcgtgcagctgttgatcgagagagaagcggggagagtgttcagaggctggaacgaaggaaagatctgcttcgcgccgacgtacaagtacacgcacaactccgacgcgtacgccggcgagacggccaagtccaagaagaagcggaggacgcccgcatggtacgccggtcgccggccggcggcggccaccgccggccgttggtacgatacagccatggattccggccgtcgagcattttttttcctgaccacttcccatggcagtgtaggtgcgaccggatactgtggcagggagacggcatcgagcagcttcagtacctgcgcggagagtcgaggttctccgaccaccggccggtctgcggcgtgttcgccgtcgaggtggacggcggcgatggcgacggcggcggcgccgccggcaagatcatgaagggttactactccctcaacgcccggatcggcggtgacagatcgcagtgtcaccagggtgacgtgtcgtgaactgattatatatttcatccccttttgcaagtttgcaatgatagggtcttgtgtataagaaggtttattaccaagaacagaggatattgtagatactagtatctgacaagaatcccatgactgaaattagtacgagtactgactaattaagaatacagtaattttcgtaatttgtagaacctgtctagctgtatggttatttttgtccacttatatgaaccccttgggcagagaaagttgtctcgtatatatgtatagacaaattatgtactcgttatattgttatatttttttc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0222900, RefSeq:Os06g0222900