Os06g0224200

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Revision as of 09:10, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0224200| Description = Glutaredoxin domain containing protein| Version = NM_001063722.1 GI:115467175 GeneID:4340534| Length = 7080 bp| Def...")
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Gene Name

Os06g0224200

Description

Glutaredoxin domain containing protein

Version

NM_001063722.1 GI:115467175 GeneID:4340534

Length

7080 bp

Definition

Oryza sativa Japonica Group Os06g0224200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:6439528..6446607

Sequence Coding Region

6439709..6439862,6441054..6441250,6442484..6442775,6443053..6443286,6443388..6443443
,6443736..6444938

Expression

GEO Profiles:Os06g0224200

Genome Context

<gbrowseImage1> name=NC_008399:6439528..6446607 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:6439528..6446607 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagaatggagacaaggatgagaaaaatgttgctgtcacggaaggatctaccaattctgaagaaaaggatcaagatgaggatttgttgaggagaacagaaatgctgaatgcaaaagaagcaataaattcttcaaatgagaattcaggcaatgattcagaagcacagatccatgtgagagatgattcacaaaaagaattcaatgagaagatgaataaagaaggaagctcagatccaatggaacctacagattcaagccagacagaggaagatatccttgctgaagacaaatctgaagaacctgtttttgatggaactgaggttgctgaaatggaagatttgaggcgttcgtccaatcaatctgtggaacttgattcagatgcccatgggtctgtactcaatgaaagagctactgcaatcaagaattttgttaaggaaaagggtgccattgcagtttcaacatttataaggcgcctttctggcaaaaaggacgaaaatgaattttctgttgaagatgaaaagaatgaaggatcagaaagcatcagtagtggcaatattggctcagatgctgaacctaaatcaaaagaggtgcagcccaaatctgaggagagaactacatggaatccactcaacttgattaaaatcggacgagattttgataccttcatgactggggaagctgggcatgaaaatgtgccagatttgatagagcaaccaacagggaagggaagaattattatatacacaaaactgggttgtgaagattgcaaaatggttcgctcattcatgcgtcagaaaatgctcaagtatgttgagatcaacatcgacatattccccagtagaaagatggaactagaaaataatactgggtcatccacagtaccaaaagtgtatttcaatgacttgctgattggagggttaactgaattgaagaaaatggaggagtctggcattcttgatgacagaactgatgctcttttcaaagatgaaccctcatctgctgctccgttgcctcccttacctggagaagatgatgaatctggtagtgggaagatagatgagttggcaaccattgtcagaaaaatgagagagtcaatcactctgaaggatagattttacaaaatgagaagatttagcagctgctttcttggtagtgaagctgtagatttcttatcagaagatcaatatttagagagagatgaggcggtggaatttggaagaaagcttgcaagcaaatatttctatcgccatgttttagacgaagatgtatttgaagatggaaatcacttgtatcgcttcctggataatgatcccataattatgagccagtgctacaacatccctaagggtatcattgatgttgaaccgaaaccaattgttgaagtggcatcaaggttaagaaagttgtctgaaaccatgtttgaagcttatgtatctgaagatggtaaacatgttgactacagaagcatccagggttgtgaagaatttaaaaggtatgttagaacaactgaggagctccagagggtggaaacccatgagttatcacgggaagaaaagctcgctttcttcataaatctctacaatatgatggctatccatgcattagtgacatgtggtcatcctgctggaccattggacaggagaaagttctttggagattttaagtatgtcattggtggatgtgcttattcaatgtcagctattcaaaatggcatactgcgtggtaaccaaaggccaccatacaaccttgccaagccttttggacagaaagaccaaagatccaaggtggcccttccatatgctgaacctcttgttcactttgctttggtatgtgggaccaaatctggacctgcacttaggtgttactcgccaggaaacatcgataaagaactggtggaagctgcacgtgatttcctaagaaatgtaggaattgttgttgatcctgaagccaaggttgcatctgtaagcaagattttgcgatggtatagcacagactttggtaagaacgagacggaagtgctgaagcatgcggcaaattatctggaaccagcagagtcggagcaattcttggaactacttgcgaacactcaactgaaagtcttgtatcaaccctatgactggagcttaaacatttag</cdnaseq>

Protein Sequence

<aaseq>MENGDKDEKNVAVTEGSTNSEEKDQDEDLLRRTEMLNAKEAINS SNENSGNDSEAQIHVRDDSQKEFNEKMNKEGSSDPMEPTDSSQTEEDILAEDKSEEPV FDGTEVAEMEDLRRSSNQSVELDSDAHGSVLNERATAIKNFVKEKGAIAVSTFIRRLS GKKDENEFSVEDEKNEGSESISSGNIGSDAEPKSKEVQPKSEERTTWNPLNLIKIGRD FDTFMTGEAGHENVPDLIEQPTGKGRIIIYTKLGCEDCKMVRSFMRQKMLKYVEINID IFPSRKMELENNTGSSTVPKVYFNDLLIGGLTELKKMEESGILDDRTDALFKDEPSSA APLPPLPGEDDESGSGKIDELATIVRKMRESITLKDRFYKMRRFSSCFLGSEAVDFLS EDQYLERDEAVEFGRKLASKYFYRHVLDEDVFEDGNHLYRFLDNDPIIMSQCYNIPKG IIDVEPKPIVEVASRLRKLSETMFEAYVSEDGKHVDYRSIQGCEEFKRYVRTTEELQR VETHELSREEKLAFFINLYNMMAIHALVTCGHPAGPLDRRKFFGDFKYVIGGCAYSMS AIQNGILRGNQRPPYNLAKPFGQKDQRSKVALPYAEPLVHFALVCGTKSGPALRCYSP GNIDKELVEAARDFLRNVGIVVDPEAKVASVSKILRWYSTDFGKNETEVLKHAANYLE PAESEQFLELLANTQLKVLYQPYDWSLNI</aaseq>

Gene Sequence

<dnaseqindica>6746..6899#5358..5554#3833..4124#3322..3555#3165..3220#1670..2872#agtttcacttcccccttggtcttggtccgtctccactctctccactccgccgccgccaccgctcgtcgtcgcctccccccccaaatcaaaaatcaaaatcaaaacccccccatctcttcttctagtttcttctagaagccgggacgaacaccgcgtcgtcttcgccttcgccttcgtcgtctcccgctcgcttcctccctcctgggttaggttaggcctccccccctctctctctggttttgtgctgatctcggagatcccggctccaggtcgagtgatccattttttatttttttattttgttttttttgggtttcgctgggtttgtgccagtgtgttgttctcgtggatggtttgtttgttgggttccaccggatttttttttttttgggggggggggggggtggggcgctggagatggggggatttatggtagggtttatcgtctcgtctcgtgcgagtcggcccgtcggtgggtgggcgggatctcgcgattccgtgttgattagttcgtcttaagcggttcgggtgatttgatgctcgtacgtgctgatgaactgtttgggggcttgtagttttttttctctctctctcttttaaagtaatcccgagtttgccggggatttgaatatcggtttcgtgtgtgatttgctctagagggtatggtttaaggtagagaaatttgatactaacatatgccatccaatccgcgtgccttgtgtgttttgccactttgatccggatgtcttggttagccatggcgttcctgcttgagctcacatggctagaggttgcgcaagtagtacttgctccgtgcgaacgattcaccatctaatggaaatctggcggaagattggatgcatttgttaagtactgtgtgcaattagaatacgtttgcaatcgtgctgtaccagtgtctgccccccattatttatctgacagtctgacagagcgtcttcagatttgtgttaattgctcctgtggttgatgagtctttatagggtgcagcatctcaactttatttctttttaattgtgggaagggtgtactccgtatggctgacagatcgctggggagtaccttaatgaatactcacgaatttattattactagcacagtatgaagcctctgagttacttgagctgtgcataatctgggttgtgtatcgatcacaaggatcaaattggctaatatgtgtagttgtatattcataaaaatgatctagcatgtattatctgttcgtcactaaataaccaaaattgttgagatttcattttcatacccatctaagttatttgtctaaactgtgtgcgccttgtgattttgtgaaaattcttgtgtgctaaaaggaaaatgaagaccataattgcaaatttattatgcatataatttctttcgattgtttaaggcacatgggaataactgccaacatgccttaatcacactattttttttttaaaaaaatggataaggtagatgatcttgagtctgttagtctttgttctacttaccatttatattctgtgtatttgtcttgctaaaataaacttcactttccactatcctggatgttttctttcagttatttctaatatgtcttgttggccatgcaggctgtgcactgaagtactgaacgttcttttgtagactgttaagcttatcctgcatcatggagaatggagacaaggatgagaaaaatgttgctgtcacggaaggatctaccaattctgaagaaaaggatcaagatgaggatttgttgaggagaacagaaatgctgaatgcaaaagaagcaataaattcttcaaatgagaattcaggcaatgattcagaagcacagatccatgtgagagatgattcacaaaaagaattcaatgagaagatgaataaagaaggaagctcagatccaatggaacctacagattcaagccagacagaggaagatatccttgctgaagacaaatctgaagaacctgtttttgatggaactgaggttgctgaaatggaagatttgaggcgttcgtccaatcaatctgtggaacttgattcagatgcccatgggtctgtactcaatgaaagagctactgcaatcaagaattttgttaaggaaaagggtgccattgcagtttcaacatttataaggcgcctttctggcaaaaaggacgaaaatgaattttctgttgaagatgaaaagaatgaaggatcagaaagcatcagtagtggcaatattggctcagatgctgaacctaaatcaaaagaggtgcagcccaaatctgaggagagaactacatggaatccactcaacttgattaaaatcggacgagattttgataccttcatgactggggaagctgggcatgaaaatgtgccagatttgatagagcaaccaacagggaagggaagaattattatatacacaaaactgggttgtgaagattgcaaaatggttcgctcattcatgcgtcagaaaatgctcaagtatgttgagatcaacatcgacatattccccagtagaaagatggaactagaaaataatactgggtcatccacagtaccaaaagtgtatttcaatgacttgctgattggagggttaactgaattgaagaaaatggaggagtctggcattcttgatgacagaactgatgctcttttcaaagatgaaccctcatctgctgctccgttgcctcccttacctggagaagatgatgaatctggtagtgggaagatagatgagttggcaaccattgtcagaaaaatgagagagtcaatcactctgaaggatagattttacaaaatgagaagatttagcagctgctttcttggtagtgaagctgtagatttcttatcagaagatcaatatttagagagagatgaggtacgatatcaactgctgcttattaataaaacaacttctagcaatgctgtatgcagaactcagccccatatagctctgaaacaacattaatcttatgtccctttttcagttggctattggtggaaaaaaagtactcataactgtatctttgaaatgatttcattctttggaaagaaaaatatccattttattttgttcctataagaatatagtttatctttgaagggatacagaggaaattaaatttagttatcactttccaaaaactcaccgatatatattttccatgtaggcggtggaatttggaagaaagcttgcaagcaaatatttctatcgccatgttttagagtaagttttggaaattatcttatataatattcttttcgttttatttttttttccatacatatcaatttgcaatatttacatctggcattctgactttgcagcgaagatgtatttgaagatggaaatcacttgtatcgcttcctggataatgatcccataattatgagccagtgctacaacatccctaagggtatcattgatgttgaaccgaaaccaattgttgaagtggcatcaaggttaagaaagttgtctgaaaccatgtttgaagcttatgtatctgaagatggtaaacatgttgactacagaagcatccagggttgtgaagaatttaaaaggttagcacttagaactatatgctcattgtcaaagtatactgcataatcaatgtatttcttgccagcagatattactgtgaacaatgttgtattgctctagttggctaattttaattgatacagatgtttaggttcataatgtgagctggccttgaatatgtatatcagtttatttttataatgttatgtgatatacaaatataatatatttcagttgttgcggttatcctattgtgatggttgacgggtatgctgtactaacatatttcttgcataggtatgttagaacaactgaggagctccagagggtggaaacccatgagttatcacgggaagaaaagctcgctttcttcataaatctctacaatatgatggctatccatgcattagtgacatgtggtcatcctgctggaccattggacaggagaaagttctttggagattttaagtatgtcattggtggatgtgcttattcaatgtcagctattcaaaatggcatactgcgtggtaaccaaaggccaccatacaaccttgccaagccttttggacagaaagaccaaagatccaaggtgaacagagcagatctcagccaaaaaaaggggaaacaaagttctctgatatgattgctttgtttccccccatatgtcatgataatacctgtagccctcttaaagtttttgtctgatatatttccattataccaagcaatgctacttaattctacaattgcctccaggatatatatgtttggaaaaaatgtgtatcagctattatgtttggaaattgctttacctgtctagggtctattctgcagttcttcttaggtaggcagctgaaggggtatatgcttgatgcgttatgtggatgtcaaaaaatcactaaaatgacacgtaccatcatggctaattttcctatcatttatcccccgattttctgagtaaaaagaaaacacttttctcataaacatgtattgtatctgttgtttcggaaacatacaattttactagtattttcaggccacattatataagtgaagaccttgggcatttagagcctaattattagttagaggaaaggaatatagaaggcccgttgtatatttgatttattatctgtatgtgtttttgggagccatagcctagcggtcatggtgctcaagtagcacctctaggtcctaggttcgactccccatgggatcgaattttaggtttggttaaaaaaggtcactcgttgtcactggcccctttaaaacacatgtttagaattgacctatggagggcgggccctcgtgtacgggttaaggaccgacccatacggggcaagtccgtgtgtgaggggccagggttcgtagtctttctcggccgatttggttgaggcttcctattcttaatgaaaagccataggggtggtcattcccccgccaccgccagtcgaggtgttttttttctttttctttctggaagtcagatttaggatattttttaaaaggtaaaagtctgtttatagaagtcgactactatgctgtaatggttgttttcagtacctatttgccaaaaatagccatacgaagtggcaacagcctttaccatatctgcaatataatacgggttacatcccattgatcaatccccattcactggttacatgcatgagtactggctttagcagcatttctttgaatcatttttttattactcccaattaattaattcatcaaacttacatgtcagacgtgagtttgcaccaatgctgattttccaatgatgataaattctccttttttccttgtctgtaatttgcaggtggcccttccatatgctgaacctcttgttcactttgctttggtatgtgggaccaaatctggacctgcacttaggtgttactcgccaggaaacatcgataaagaactggtggaagctgcacgtgatttcctaagaaatgtaggaattgttgttgatcctgaagccaaggttgcatctgtaagcaagattttgcgatggtaagaacactattattcttgcttcgcaaatagggccttgagagtttaataagtgctttcttattagtgtaccccatctaaacttgtcatcagaatgtacaactgcaggaacatatacaagaatgaattttatgttaggtagtttagttcatgatgcagggacataaacaacaacgaattttatgctaggtaatttaaattgtttttgagccttctggttggagagaaaaagtagataacacgtaccactagtgcctgctagttttgggctacttgaatatactctatggttaacctagcagcaaaaccagaaaaatctgttaattacctggcttagcagtaacccctatcatagatcagaaccacctgaaaagttctgtacaatttatagttaccgcatcttactacaagagtacaaggttaggtgtggctttgtgggaggcatgaagaccattgaaggctaggttctgatgtcgagcacctataggtcactgattttattttctcatttccataagaagtccaaattggagtgtgaaagttttgaacaaaatactttagataatgtcgataaggcctggatttcaagaaaaaaacatttttctctaatctgctctcggtataaattgtatgtgaaaaatggtgaggaattcccccaaaatggttacccaatttttagctcttgcatggttacatgagcaagactaatggaagaatgtgaattcactggttaatcaatttaagaaaataataatatgcaaattttatccattttactacattatacatgatactccctccgtcccctaatataagggattttgacattttgcttacactgtttgaccattcgtcttattcaaaaatttttggaattattatttatttttttgacttagtttattatctaaagtactttaagcacaacttttcgttttttatatttgcacaaattttttgaataagacgagtggtcaaacagtgtaagcaaaatgttaaaatcccttatattaggggatggagggagtacatcataattcgatatgcaattggggaacttgtggcaatgaataactgaaaggaaaataaaatggctacatatttgtaatggtgacattattattatttggccagtgctttagtaagaagtttctcatctgaagctcatttggtaaataaataatttttcaggtatagcacagactttggtaagaacgagacggaagtgctgaagcatgcggcaaattatctggaaccagcagagtcggagcaattcttggaactacttgcgaacactcaactgaaagtcttgtatcaaccctatgactggagcttaaacatttagctgcagccatggtattcacatagatgtctagttatacttgaatacctgtcacagatactcgtggaagatcacgacttcttttacaccagaattttcccaagagttggtcacagctctggatgctgttttgttgtggcacaaagaaatgagtaccaatccaactctgttcgattcactggac</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0224200, RefSeq:Os06g0224200