Os06g0225000

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Revision as of 09:10, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0225000| Description = Similar to NTGB3 (Fragment)| Version = NM_001063728.1 GI:115467187 GeneID:4340541| Length = 3868 bp| Definition = O...")
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Gene Name

Os06g0225000

Description

Similar to NTGB3 (Fragment)

Version

NM_001063728.1 GI:115467187 GeneID:4340541

Length

3868 bp

Definition

Oryza sativa Japonica Group Os06g0225000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:6474162..6478029

Sequence Coding Region

6474211..6474342,6474745..6474876,6477640..6477960

Expression

GEO Profiles:Os06g0225000

Genome Context

<gbrowseImage1> name=NC_008399:6474162..6478029 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:6474162..6478029 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgtttctgctggattggttctacgacgtgctggcgtcgatcgggctgtggcagaaggaggccaagatcctcttcctcggcctcgacaacgccggcaaaaccaccctcttctacatgctctcacaagagaatctggcggtgcaccagccgacgcagcacccgacgtcggaggagctgagcatcgggcggatcaggttcaaggcgttcgacctcggcggccaccggatcgctcgccgcgtctggagggactactacgcccaggttgatgcagtagtttacgtggtggacgctgccgacaggtgccggttcgccgagtcgaagatggagctggacgccctcctgtctgacgacgcgctcgctggcgtgccgttcctcgtcctcgggaacaagatagacatcccgtacgcggtgcccgagcaggagctgtgctactacctcgggctcaccggcctcaccaccggcaagggcaatgtcaaccttgcaggaaccggagtgcggccggtcgaggtcttcatgtgcagcgtcgtccgccggatgggctacggcgatggcttcaggtggatgtcacagtacatcaagtag</cdnaseq>

Protein Sequence

<aaseq>MSFLLDWFYDVLASIGLWQKEAKILFLGLDNAGKTTLFYMLSQE NLAVHQPTQHPTSEELSIGRIRFKAFDLGGHRIARRVWRDYYAQVDAVVYVVDAADRC RFAESKMELDALLSDDALAGVPFLVLGNKIDIPYAVPEQELCYYLGLTGLTTGKGNVN LAGTGVRPVEVFMCSVVRRMGYGDGFRWMSQYIK</aaseq>

Gene Sequence

<dnaseqindica>50..181#584..715#3479..3799#atcaaatcaacaacaggaagaagagaagaagaacataacatacctggagatgtcgtttctgctggattggttctacgacgtgctggcgtcgatcgggctgtggcagaaggaggccaagatcctcttcctcggcctcgacaacgccggcaaaaccaccctcttctacatgctctcacaagaggtataggctcccatcggatggcctaatcaaccgaagaaaatgccaaattttaaatttttaaacttaattttgagattgattttaagatattttcaacgtagtttttttttcagcattggcttttaagtcaccatgaacacatatataaaaattttacctacaaatctatttttattatctaataagccgttttagcttattaagaaaaaagccaaacgatagggcctatatagatcgatcgctcgctgcacatatgtttgatttgcaaaggccacatatgtttgatttgcaaaggctgatggtgatgatatcaaaagctactcctagattcatatatgcctgtgctcatgagtgttcattgtgtggtgatggctggttgggctgtgttgtgtttgtgtgcagaatctggcggtgcaccagccgacgcagcacccgacgtcggaggagctgagcatcgggcggatcaggttcaaggcgttcgacctcggcggccaccggatcgctcgccgcgtctggagggactactacgcccaggttggtttttttgctttctttgctcccctcctagtcctagtcaccgaaatcgctaattagctgcacgcggttcagtttccgggcccatacatttatctattttttacaattttttaatgcatatatgcacaaagtttatatgtacatatataaacttttttatatatacatataaagttatagattttttatatgttcaaagtatatacatactagaaaaaatgcatgtgcgttgcaacggctgaagattattttaatcttattattgttatacggtttagttaaggtgaaattcactgtgtgaattcgtttggatctatatttttctagaaaatcataagctgcaattagaaatttgatcatctcaaattagcatgcgagtttttttaaaaagatttcttatatgactctttctgtatttctaaaagtgaactagcttaaaacccgactcaaatacggatatgcatttccaaaagcgaacgaacttaaaaaccgactcatacacggatgacgtatcaaaataccggcaaaaacatcttcaatttttataatagtagaattagagacataaattttctatatactagcataatgcccatactttgtaacgggattaaaaagagaatcatatggtattacatattcacatggggaaacttaacatggctatatcattatgtgaaaaaaatttggaaaaaaaacccctcaaatttatcctcaaatcaaatcctacatttcaaattttgatgtagttactatttctctctagttgaaataaaagcttctcttagggcctctttgtttaggcttaggcttattggtttagatttttaagtcagcttattggcttatatgatttataagccagtggatttaatgtcttaagtttagtggtggagtcatacatctaccttatataagctgaaaaagcttctccaacctagcttttggcttaatagtgttagagtggcttatggcttaaaaaagccaaacaaaaaactgcttgtttatttaggcttagactttttggcttataagttggcttataagcctaaacaaagagggcctagtactctcttcttcttttaaagagtacaaatagcagggtttaccttaccgccggggccggggttaccgcaccccggcggcaagcacggttaccgcgcggtaaccgcggtaaccgtgaaaaaccgtacaaaaccgtgcaaaatttatcaaaaaatcaaattattttttaaatttatttgtatttaaggaggttaccgcggtatttatattaccgtacccccgcggtaagcccggtaaccgcggtaacccgcggtaaggtaaaccctgacaaatagggacttacatgtaattgataggggtggtggtggcagaaaatctgccactaccattgcttccttttaagtggtatagatacatctacaaagttagtttatacatatgtataacatattcgggaccgaaaaaaggggcggaggtgggctgggaccgcaaccgtgtgtcgtcaaccgcccattagccacatgaccaaagattcaacgtatctctaaataaattaatttgtgtatatataaataatatttttaaattttaaacttattcttaatggtatttgtaccaaaaaaatattgtataagttatctttatatagctaaacttttataaataataccatggtacttgataaataataatctttatctaacccaaagttatctaaatttaataaattaagcacctctattatatttattatttggtaaattaataacaaatagaatacttatactgatggacttaaggtatacataaaaaagacgtaaatattagggaaggacctaatatcaaataaatagaaggggtaaggcttcgaaccctagtcgtctaacccaccaccttgtgaagatattcataagatccctgggtgtttctcaaaaggtatacataggatataatcactccttttttcttaagcggggcctcaccgtggcctttgggcatcgccttcttcggacatcgacttgacggggattcatcgtcaagagatgggtgcaccacatgagtgaccagcgaagtatcccctcccggtggcagcgattgtgtgagccccctggcgactggaggaagcttacttttaatatttggcgccgataataaccttggtggaatctgaacaaaaaaaaagaataataatgtaggttagtactagtaccttattaagggatgacagattgacagtcatatatattagtgcataacccaactctgcatattgttacaacaaaacaaagaaaaaactgatagtggtatcaattgcgggaggaactgtaccatgtttctttagtcgtacagccagcatgtgtatattcatgactgaccaacaagtttttcttctttttttttctaaggcgggcaaaaggtttgccttttatactgatagagtaggagaaaatggactatttacaggactgaccaacaagtttatttcctttgaaactcataatgaacagggattgagttgggcgcttgcctgagaattcatgctagtatgaacacagcttcccaatcagccagtacacagtaatcacagtggtggcgccagctcatgcatactttgtcaattgtcacatgctgttgcatatcttgtcaatagccaaataccacctgtttttccagcatttgtagctacttccctcttcaaagtctgaagtgagccacttttgctgcttcttcataagcttcatgtctgcttgacaggttgatgcagtagtttacgtggtggacgctgccgacaggtgccggttcgccgagtcgaagatggagctggacgccctcctgtctgacgacgcgctcgctggcgtgccgttcctcgtcctcgggaacaagatagacatcccgtacgcggtgcccgagcaggagctgtgctactacctcgggctcaccggcctcaccaccggcaagggcaatgtcaaccttgcaggaaccggagtgcggccggtcgaggtcttcatgtgcagcgtcgtccgccggatgggctacggcgatggcttcaggtggatgtcacagtacatcaagtagaacatggtagagactcagagcatgtatctatatgcctcttgtatcaattaatcaagacatttcatatga</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0225000, RefSeq:Os06g0225000