Os06g0225300

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Revision as of 09:10, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0225300| Description = Similar to SERK1 (Fragment)| Version = NM_001063731.1 GI:115467193 GeneID:4340544| Length = 4312 bp| Definition = O...")
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Gene Name

Os06g0225300

Description

Similar to SERK1 (Fragment)

Version

NM_001063731.1 GI:115467193 GeneID:4340544

Length

4312 bp

Definition

Oryza sativa Japonica Group Os06g0225300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:6483243..6487554

Sequence Coding Region

6483406..6483732,6484230..6484624,6484757..6485098,6485176..6485313,6485610..6485686
,6485769..6485840,6485912..6485983,6486116..6486259,6486642..6486713
,6486798..6486930,6487053..6487131

Expression

GEO Profiles:Os06g0225300

Genome Context

<gbrowseImage1> name=NC_008399:6483243..6487554 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:6483243..6487554 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgcgcggcggcgcctcctcctgctcctcgtcctcctgctgtgccgcctcgccgccgtcctccccacctccgaagtggaggccttgcagggtttcatggcagggttcgccggcggcaacgcggcgttccagagctgggacgcgtccgcgcccaacccttgcacctggttccatgtcacctgtggcccggggaaccaggtcatcaggctggatctcgggaaccagtcgctgtccggcgagttgaagcccgacatttggcagctgcaagcattgcaatccctggaactttatggcaatagcatcagcgggaaaatacctagcgagcttgggcggttagctagcttgcaaactttggatctctacttgaacaatttcaccggtgaaataccgaatgaactgggaaatttatcgaagctcagtaacctccgtctgaacaacaatagtctgtcaggtgcaattcccatgtcattgacaacaatccaaaatcttgaagtgctggacttgtcacataacaacttgtcgggaataataccgaccaatggttcattttcacacttcaccccaatcagtttctccaataacccacgtactttcgcaaattcttctgattcgccatcaaataactcgggagcagcggtgccatcaggaagaagtagtgcatccagcattggaacaattgctggtggagctgctgcaggtgctgccatgttgtttgctgctcctattgtattgttcgcatggtggtggcggcgtaaaccacatgaccaattctttgacctactagaagaagaaactccagaagttcatctgggtcagcttagaaggttcacactgagagaactgcaggtggcaacagataacttcagtcaaactaatttgctagggagaggaggctttggaaaggtctataaaggaaggttgttagatggttcattgatagcaataaaaagactaaatgaagatcgaattggaactggagagcggcagttcctaatggaagtcgagatcatcagcatggccgtgcatcaaaatctcctacgcctccaggggtattgtatgacacccaccgagcggctgcttgtgtatccttacatggagaataaaagccttgagacacgcttacgagagtgctctgattcacaacaaccacttgactggccaacacgaagaaaaatcgcgttagggtctgcaagagggatctcttacttgcatgaaggatgtgatcccaaaattatccatcgagatgtcaaagctgctaacattttgttggatgaaaaacttgaagcagttgttggtgatttcggtctggctagaattatggattacaaagtttcccatgttgtaaccggcgtgatggggacattggggcacattcccatggagtacctgactgcaggaagaacttcagataaaactgatgtttttgggtatggaatcatgctttttgaactgattagtgggaaaaggggatttgatcttgttggtcttgcaaatgaagaaaatgccagagtgcatgattgggtgaagaaactgctggaagaggacaggctggaggtgctgattgacccaaacttactggaaatctacaatggtggggaacagggagtgcgagaggagatgaggttgctggtgcagattgcgctgctctgcacccaggagtccgctccaagccgccccagaatgtcaacggtggtgacaatgctagaagacggtatcgcggagcactgggatgcatggcaaaggaagacgattgtgcaggcaagcctgcaaggaggacagggcgtttctgaggctcgcaatgactctgttgcaaatctccctccagacacattgtctggtccaaggtga</cdnaseq>

Protein Sequence

<aaseq>MAARRRLLLLLVLLLCRLAAVLPTSEVEALQGFMAGFAGGNAAF QSWDASAPNPCTWFHVTCGPGNQVIRLDLGNQSLSGELKPDIWQLQALQSLELYGNSI SGKIPSELGRLASLQTLDLYLNNFTGEIPNELGNLSKLSNLRLNNNSLSGAIPMSLTT IQNLEVLDLSHNNLSGIIPTNGSFSHFTPISFSNNPRTFANSSDSPSNNSGAAVPSGR SSASSIGTIAGGAAAGAAMLFAAPIVLFAWWWRRKPHDQFFDLLEEETPEVHLGQLRR FTLRELQVATDNFSQTNLLGRGGFGKVYKGRLLDGSLIAIKRLNEDRIGTGERQFLME VEIISMAVHQNLLRLQGYCMTPTERLLVYPYMENKSLETRLRECSDSQQPLDWPTRRK IALGSARGISYLHEGCDPKIIHRDVKAANILLDEKLEAVVGDFGLARIMDYKVSHVVT GVMGTLGHIPMEYLTAGRTSDKTDVFGYGIMLFELISGKRGFDLVGLANEENARVHDW VKKLLEEDRLEVLIDPNLLEIYNGGEQGVREEMRLLVQIALLCTQESAPSRPRMSTVV TMLEDGIAEHWDAWQRKTIVQASLQGGQGVSEARNDSVANLPPDTLSGPR</aaseq>

Gene Sequence

<dnaseqindica>3823..4149#2931..3325#2457..2798#2242..2379#1869..1945#1715..1786#1572..1643#1296..1439#842..913#625..757#424..502#gcgattagcccccaagcatttttgcaaaacttgtttggaactttggccaccgccgccggcgccgcgacgcgacgacgggaaggcgccggccgccggcggccagcggcgctggcggtgaagccgatcgaggaggcgtcctccaccgctcggcgaccaaccgccgacggcgacggcgatggcgacagcgcgcaccatgcagggggccccactctgtttactcccccgcgtccgcgaccgcgaagtctccggtctccgccgcgcccgcgtcgcctcgccctgaccaccaccagtccaccgccgcggcccacacggcacagcctctcacaagggaggaagggggaagtgagcccccgcgccacggccacgcgccgcgggcttcctcctcctcctcctcctcctcctccccgagccgcacgccgatcgatggccgcgcggcggcgcctcctcctgctcctcgtcctcctgctgtgccgcctcgccgccgtcctccccacctccgaaggtacgcacgcgctccctcgctcccgcccaccccctgttcgatgaaatcgctggctcgctcgctgcggcggtctcgcttgttcgatcgattgcgatttttattttatttttttttgggtgcagtggaggccttgcagggtttcatggcagggttcgccggcggcaacgcggcgttccagagctgggacgcgtccgcgcccaacccttgcacctggttccatgtcacctgtggcccggggaaccaggtcatcaggctgtaagcatctactgtactacctgctgcagtgttgatcactaattcactggtgctactgctgaatgaatttgcatcttcgcgcagggatctcgggaaccagtcgctgtccggcgagttgaagcccgacatttggcagctgcaagcattgcaatccctgtgagtttgtccatgtttatttgctcatttcttccatggagaatattgggttgcattgcatcttttcaccgatcagacagcactggtagtactcatgcctgctatgaatgtttccgttatgcccagtgatgtggcgtatgcaatgcatatgccctttttccatcttgcctctcgcttattatatgagtaaaaagaatgttgtttctggtctatctcttctatgaatcagtagcgtttgatcatcctttaggaataaaagctgacgatgcatcttgcgaaagcatactatacaatatcactatgagtcttgcattggaatgttggtcattttctattctcagatttgatgattctatgtgactaatgtatcttttggtagcagggaactttatggcaatagcatcagcgggaaaatacctagcgagcttgggcggttagctagcttgcaaactttggatctctacttgaacaatttcaccggtgaaataccgaatgaactgggaaatttatcgaagctcagtaacctgtaaatattctcatctctgcttcaaataatttgtatttgatgttaaatttatgtcttatgatatcacatagccagtgaaaaattaatgtagaatttactactcctgctctttgactttgcgtgcaaggatagccgtctgaacaacaatagtctgtcaggtgcaattcccatgtcattgacaacaatccaaaatcttgaagtgctgtaagttctctgctacaccatgccgcaagatgccgcaattgagacgctgatatgctaatatattcattcagggacttgtcacataacaacttgtcgggaataataccgaccaatggttcattttcacacttcaccccaatcaggtttgcttggcctggagtagtgattatgtcgattcaacaatgcattatgactggtgtgaaattttgtaattgtgtcttgcagtttctccaataacccacgtactttcgcaaattcttctgattcgccatcaaataactcgggagcagcggtgccatcaggttgtctgttaattccttactctggagtgataaactgcatttatttctgcagtgtttcattattctgtgtagaatcccatacataacccagttgccaagtgccaagtgttccaaaattgtctataacctgttgttgcagcagcctgggcatttggaattcatctagtttttgctcttatctcatcatccatttcgatgctatttatctaaacaaataagtcggaaaaacaccactttaattctttcgaattggcggttactctagttgattctgtatttggcacttgttaactcaggaagaagtagtgcatccagcattggaacaattgctggtggagctgctgcaggtgctgccatgttgtttgctgctcctattgtattgttcgcatggtggtggcggcgtaaaccacatgaccaattctttgacctactaggtcagtctacgtgagaacttttggcaatctctacggtttcctttgttatttgatggcattcctttttctctatgcagaagaagaaactccagaagttcatctgggtcagcttagaaggttcacactgagagaactgcaggtggcaacagataacttcagtcaaactaatttgctagggagaggaggctttggaaaggtctataaaggaaggttgttagatggttcattgatagcaataaaaagactaaatgaagatcgaattggaactggagagcggcagttcctaatggaagtcgagatcatcagcatggccgtgcatcaaaatctcctacgcctccaggggtattgtatgacacccaccgagcggctgcttgtgtatccttacatggagaataaaagccttgagacacgcttacgaggtattttctgaatattctgcacttgaactatggagtatagaggtgttagtttctcaaatatgtgcagtgagatgatactttcaataaagatctgattacaacattaaaataagtttcatgtcaactacacagagtgctctgattcacaacaaccacttgactggccaacacgaagaaaaatcgcgttagggtctgcaagagggatctcttacttgcatgaaggatgtgatcccaaaattatccatcgagatgtcaaagctgctaacattttgttggatgaaaaacttgaagcagttgttggtgatttcggtctggctagaattatggattacaaagtttcccatgttgtaaccggcgtgatggggacattggggcacattcccatggagtacctgactgcaggaagaacttcagataaaactgatgtttttgggtatggaatcatgctttttgaactgattagtgggaaaaggggatttgatcttgttggtcttgcaaatgaagaaaatgccagagtgcatgattgggtaagtcatgctttgttgaatcttcccttgttttgcaggatatgtcttttctcaagctattatattctgtcagttatattgactacctcccatgctttacatttgacattataatttgcactataatctttagtttcgattcttatttctagggacaacatgctaatgtcttcaatgaaccacttaattcatactgtattactgaagcaatccttatgaaactccaactttcttcaatagatcaaacatgtctacctccctaatcattagtagttcgcacgatttcatttgttaaaaaacaatattgactgcaaattatgcagatatttacattctgttgatctctttaacatggaacgaccaacatacactgtaaactggttaccaattcttacttcatattgaattgaattaaaaaaaatgatacagtgctattcctgtagagcataagcatgaactcagtgataaaagagggccatattctttttattattcaggtgaagaaactgctggaagaggacaggctggaggtgctgattgacccaaacttactggaaatctacaatggtggggaacagggagtgcgagaggagatgaggttgctggtgcagattgcgctgctctgcacccaggagtccgctccaagccgccccagaatgtcaacggtggtgacaatgctagaagacggtatcgcggagcactgggatgcatggcaaaggaagacgattgtgcaggcaagcctgcaaggaggacagggcgtttctgaggctcgcaatgactctgttgcaaatctccctccagacacattgtctggtccaaggtgactgccaccttaaggactatgaagggtggttcttttgtagagcttagtgaacttagacagaacacttgccattcttaaaaaaacagcagattatatgttttcttgtagcatgtgtatgtattttagtttttcccctttttttcaagtaattcataatcactact</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0225300, RefSeq:Os06g0225300