BGIOSGA029336

From RiceWiki
Revision as of 17:17, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA029336

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA029336, complete gene.

LocusTag

P0705E11.9

Ensembl Transcript ID

BGIOSGA029336-TA

Ensembl Protein ID

BGIOSGA029336-PA

Length

1769

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:20313238..20315006

Sequence Coding Region

20314888..20315006,20314699..20314777,20314451..20314613,20314206..20314316,20313771..20314117
,20313238..20313339

Genome Context

<gbrowseImage1> name=IndicaChromosome09:20313238..20315006 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:20313238..20315006 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTGAGAAGCTGCTGTACCCACCACCGCTTCTCTCCCACGAGGAGGTCGCCAACGACAGAGCGGCCTTCATGGACACCCTCAGGCGCTTCCATTCCCTCATGGGCACCAAGTTCATGATCCCTGTGATTGGAGGCAAGGAGATGGACTTGCACGCTCTCTATGTGGAGGTCACCAGCAGAGGCGGCCTCGCGAAGGTGATGGAGGAGAGGAAATGGCGGGAGGTGATGGCGCGGTTCAGTTTTCCCGCGACGACGACGAGCGCGTCGTACGTGCTGAGGAGGTACTACCTCAGCTTGCTCCACCACTACGAGCAGGTCTACTTCTTCCGCGCCCATGGCGCCCTCCTCCGCCCTGCTGCGTCGGCGCTGACGAAGACGCCGAGGAGGAAGATGAGAGGAACCTCCGATCAGTCGCCGGCGGCGGCGGAGGCCGGGAAGAGAATGGCGCTCCCGGAGCGGCTAGGCGGAGAGCCCTGCAGCTTCAGCGTGACCGGCTCCATCGACGGCAAGTTCGAGCACGGCTACCTCGTCACCGTCAAGATCGCCGCCGAGACGCTGCGAGGCGTGCTCTACCGCGTCGCACCACCACCACCACCACCAGCAGCACCACCACCACCGCCACCGCCGGCGAGGGGCCGGCGGCGGCGAGGGCGGCGGCAGCGCGACCCGGCGCAGCCGAGGCCGAACAGGAGCGCCTACAACTTCTTCTTCAAGGAGAAGCACCCGGAGCTGAAGGCGACCCACCCGCACAGGGAGAGGGAGTACAGCAGGATGATCGGCGACGCCTGGAACCGCCTCGCCGCCGACGACAAGATGGTTTACTACAGGCACAGTGCAGAGGACAAGGAGAGGTACAAGAGGGAGATGCAGGAGTACAACGAGAGGCTCAAGCTTGCGCCGTCAACAATGGCTGGATGA</cdnaseq>

Protein Sequence

<aaseq>MAEKLLYPPPLLSHEEVANDRAAFMDTLRRFHSLMGTKFMIPVIGGKEMDLHALYVEVTSRGGLAKVMEERKWREVMARFSFPATTTSASYVLRRYYLSLLHHYEQVYFFRAHGALLRPAASALTKTPRRKMRGTSDQSPAAAEAGKRMALPERLGGEPCSFSVTGSIDGKFEHGYLVTVKIAAETLRGVLYRVAPPPPPPAAPPPPPPPARGRRRRGRRQRDPAQPRPNRSAYNFFFKEKHPELKATHPHREREYSRMIGDAWNRLAADDKMVYYRHSAEDKERYKREMQEYNERLKLAPSTMAG</aaseq>

Gene Sequence

<dnaseqindica>1..119#230..308#394..556#691..801#890..1236#1668..1769#ATGGCTGAGAAGCTGCTGTACCCACCACCGCTTCTCTCCCACGAGGAGGTCGCCAACGACAGAGCGGCCTTCATGGACACCCTCAGGCGCTTCCATTCCCTCATGGGCACCAAGTTCATGTACTACTCCATCCATCCATTTCTTCTCTCATCTGCTCATTCTTGATCACTAATCCATACTCCCATAGTTGCTATTAGTAAATTAATCTTGTCAATGCATGTTCTTGCAGGATCCCTGTGATTGGAGGCAAGGAGATGGACTTGCACGCTCTCTATGTGGAGGTCACCAGCAGAGGCGGCCTCGCGAAGGTCAGCCATTTGCTGCTGTCGATTGAGGCAATGTGCGATTGATTGCAAAAATGGTGAGATTTTGTGTGTGTGGGTGGGTGTGCAGGTGATGGAGGAGAGGAAATGGCGGGAGGTGATGGCGCGGTTCAGTTTTCCCGCGACGACGACGAGCGCGTCGTACGTGCTGAGGAGGTACTACCTCAGCTTGCTCCACCACTACGAGCAGGTCTACTTCTTCCGCGCCCATGGCGCCCTCCTCCGCCCTGCTGGTTCGTAATCTACCTTTGTTGTTCATCAGTTCATGTCCAAGAACGCGAATTAATCTTGATCTTGCAAGATTTGGTTTCGTCGAGTGTTTGGGATTGAGCTGCTCGATCGCTCGATCGATCTTGTGTTTGTGTAGCGTCGGCGCTGACGAAGACGCCGAGGAGGAAGATGAGAGGAACCTCCGATCAGTCGCCGGCGGCGGCGGAGGCCGGGAAGAGAATGGCGCTCCCGGAGCGGCTAGGCGGAGGTAGGCGGCCACCGGCGAAAGACGCCATGGATTCCGTTGCTTGCTTGCTTCTCCACTCCGATGATGATGTGGTGGTTGCTGCGTGCAGAGCCCTGCAGCTTCAGCGTGACCGGCTCCATCGACGGCAAGTTCGAGCACGGCTACCTCGTCACCGTCAAGATCGCCGCCGAGACGCTGCGAGGCGTGCTCTACCGCGTCGCACCACCACCACCACCACCAGCAGCACCACCACCACCGCCACCGCCGGCGAGGGGCCGGCGGCGGCGAGGGCGGCGGCAGCGCGACCCGGCGCAGCCGAGGCCGAACAGGAGCGCCTACAACTTCTTCTTCAAGGAGAAGCACCCGGAGCTGAAGGCGACCCACCCGCACAGGGAGAGGGAGTACAGCAGGATGATCGGCGACGCCTGGAACCGCCTCGCCGCCGACGACAAGATGGTTCGTCGTCGTCCTCACGCACAGCCATTTTTTCTGGTCTCGAGTTTCTTGACGATGATCAAATTATCAGAGCCTGTTTAGATTTTCACCTATCACATCGAATATTTAGACATATGCATGGAGTATTAAATATAGGAAAAAAACTAATTACACATATTGCGTGGAAATTGCGAGACAAATCTTTTAAGCCTAATTGTTACATGATCTGACAAATAGTAAATATTTGCTAATGATAGATTAATTAGGCTTAATAAATTCATTTCGCAGTTTACAGGTGGAATCTGTAATTTGTTTTGTTATTTGTCTATGTTTAATACTTCAAATATGTGTTCGTATATCCGATGTAACACGCTAAAACTTTTCACCCATAGATCTAAACACATCCTCAATCACTCAACTCCTGAATCTTGATGCATCGCCATTGTTGCCAGGTTTACTACAGGCACAGTGCAGAGGACAAGGAGAGGTACAAGAGGGAGATGCAGGAGTACAACGAGAGGCTCAAGCTTGCGCCGTCAACAATGGCTGGATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA029336