Os06g0225800

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Revision as of 09:10, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0225800| Description = Shikimate kinase domain containing protein| Version = NM_001063734.2 GI:297605426 GeneID:4340547| Length = 2586 bp| ...")
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Gene Name

Os06g0225800

Description

Shikimate kinase domain containing protein

Version

NM_001063734.2 GI:297605426 GeneID:4340547

Length

2586 bp

Definition

Oryza sativa Japonica Group Os06g0225800, complete gene.

Source

Oryza sativa Japonica Group 

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:6494213..6496798

Sequence Coding Region

6494213..6494317,6494439..6494503,6494645..6494723,6494948..6495077,6495171..6495253
,6495420..6495580,6495699..6495753,6495877..6495923,6496600..6496798

Expression

GEO Profiles:Os06g0225800

Genome Context

<gbrowseImage1> name=NC_008399:6494213..6496798 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:6494213..6496798 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggctagagcggggctggcgatgcagtcgcgggcggctgtcggggtcggagctggccccggcgtggggcggcggggccgcgccgtgatccgcgtggggaagcggccaaccgcggcgagcctgcgggtcggaggccccgccggaccggcggcggccaagcccctcgccccgctgtactgcctcaaggcgtccagaggccacgacagcttgcataactcagttgatgaagccctcctgttaaagaggaaatcagaagaagttctattctacttgaacggacggtgtatttatttagttggaatgatgggctcagggaagagtacagttgcaaagatattagccgaagttttgggttattcattctttgacagtgataagttggttgaacaagcagttggaatgccttctgttgcccaaatattcaaggagcacagtgaagcgtttttcagagataatgagagtagtgtcttgagggacttgtcctcaatgcgacgattagttgttgcaactggaggtggtgccgttattcggccagttaactggaaatatatgaagaaaggtctatctgtctggctggatgtgcctttggatgcacttgcaaggcgtattgctcaagtgggtactgcctctcgtcctcttctggatcagccatcgagtgatccatacacagcggccttctcaaaactcagcatgcttgcagagcaaagaggcgatgcttatgcaaatgctgatgctcgagtttctcttgaagaaattgcagctaaacaaggccatgacgatgtctccaaactaacaccgaccgatattgctattgaggccttactcaagattgagaatttcgtcaccgagcattccacatcaagtggcccagttggggacttaatagttgattcccagaatcgaaggacaaaggccttgtag</cdnaseq>

Protein Sequence

<aaseq>MEARAGLAMQSRAAVGVGAGPGVGRRGRAVIRVGKRPTAASLRV GGPAGPAAAKPLAPLYCLKASRGHDSLHNSVDEALLLKRKSEEVLFYLNGRCIYLVGM MGSGKSTVAKILAEVLGYSFFDSDKLVEQAVGMPSVAQIFKEHSEAFFRDNESSVLRD LSSMRRLVVATGGGAVIRPVNWKYMKKGLSVWLDVPLDALARRIAQVGTASRPLLDQP SSDPYTAAFSKLSMLAEQRGDAYANADARVSLEEIAAKQGHDDVSKLTPTDIAIEALL KIENFVTEHSTSSGPVGDLIVDSQNRRTKAL</aaseq>

Gene Sequence

<dnaseqindica>2482..2586#2296..2360#2076..2154#1722..1851#1546..1628#1219..1379#1046..1100#876..922#1..199#atggaggctagagcggggctggcgatgcagtcgcgggcggctgtcggggtcggagctggccccggcgtggggcggcggggccgcgccgtgatccgcgtggggaagcggccaaccgcggcgagcctgcgggtcggaggccccgccggaccggcggcggccaagcccctcgccccgctgtactgcctcaaggcgtccagaggtgattcatctgttttttttttcttcttttttttttaactcccttgcagcgggcgattccggggttgtgctcgtgcgagcacggtgtcgttagggttaactttggcgcgattttgtccgggatttttttctcttcgagcggatgcggatccctctggtatggtattcagtgtggatatatgggttcgtcgtggtagccagatttttgcagttttttaattggattgggggaagtggtcactttcgtggtgatctggagtaaatgtgacaacttatgtgttggaaatggagttgttcagggtaggtgatggctttgctgggtcaaataggaaagttggatggggcaatttcaatgaagctctctctctctctttgttaggtgggttggaaggggttaaatttcagtttgtagaagtgtgtattgttacatgtttttcttggtatcaacctgctatttacttcaaaaatggtcaacattttgtaacaaatacactactacaaataacctctgatgatcacaccaacgttggattgtctatgcaccttgtatcatttcttgttgtgatttcttacccgatgtagtcttctattttaggtagttgcctgacgagatgtatatgctaaattttgcttgtgttcagctgaaataactttctttgtaatcttgtatcgtacaggccacgacagcttgcataactcagttgatgaagccctcctgttaaaggtaaataacgctttacaaaaattcctactattagttaaatcaagagtaaaatatggctagaactttgttctctcatctttggctttcggccattggtataatgttttctaattgtaattgcagaggaaatcagaagaagttctattctacttgaacggacggtgtatttatttagttggttagttctgaacctgtatcatttaattgttaacctgtaactggagactaaataccaagttaaatataacttgatcttatttgaaaatgaaattaataatattgagtacgtattgtaggaatgatgggctcagggaagagtacagttgcaaagatattagccgaagttttgggttattcattctttgacagtgataagttggttgaacaagcagttggaatgccttctgttgcccaaatattcaaggagcacagtgaagcgtttttcagagataatgaggcaatgtttcttttctgaattatgtttccctgttgacaacatgacactgttatttttcagatagtttctatttttttgtagtgatttgaatggaaagatttgtggagtaacaatttctcagacatgatagactaacaattccatggttccctgctttgtctaacagagtagtgtcttgagggacttgtcctcaatgcgacgattagttgttgcaactggaggtggtgccgttattcggccagttaactggtattgggattaatctgatctcacgcccatcctcttgtaaatttggctttttctgtttatggataataagtgaaagctcttgtgttttttcaggaaatatatgaagaaaggtctatctgtctggctggatgtgcctttggatgcacttgcaaggcgtattgctcaagtgggtactgcctctcgtcctcttctggatcagccatcgagtgatccatacacagcggtagttactctctatccttgaaactaatcgtttgtacattcacaagacagatgctttcttaactagaagataacagtcttcatgtgaaaacaccaatcagcgttagtgcttatagaccttgtagcttttgaacttgcatgtatttcatttaccatcttcattttgtctttctgcatggttgtgctcattaaaatggatggctcatggaattgtttgttccccaggccttctcaaaactcagcatgcttgcagagcaaagaggcgatgcttatgcaaatgctgatgctcgagtttctcttgaaggtatgtttcttttctgacatgtccttcatcttaatatgctcctagtttgctgatagcagatggatatctagtgtcgcttcagcgaagcttttcatgtatccaacagagaataatacagtctgcattattttacctctgcagaaattgcagctaaacaaggccatgacgatgtctccaaactaacaccgaccgatattgctattgaggtattgcacatttcgggacaattattcatgtaaacttgtcatttcatctctctttgtaaggacgtctcatactctgcccgattgaatttttttcctaacataacatcctgttgcatttcaggccttactcaagattgagaatttcgtcaccgagcattccacatcaagtggcccagttggggacttaatagttgattcccagaatcgaaggacaaaggccttgtag</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0225800, RefSeq:Os06g0225800

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os06g0225800&oldid=11289"