Os06g0228200

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Revision as of 09:11, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0228200| Description = Similar to NOD26-like membrane integral protein ZmNIP2-2| Version = NM_001063742.1 GI:115467215 GeneID:4340558| Leng...")
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Gene Name

Os06g0228200

Description

Similar to NOD26-like membrane integral protein ZmNIP2-2

Version

NM_001063742.1 GI:115467215 GeneID:4340558

Length

4599 bp

Definition

Oryza sativa Japonica Group Os06g0228200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:6647405..6652003

Sequence Coding Region

6647866..6648121,6648834..6648895,6649008..6649202,6651296..6651520,6651679..6651837

Expression

GEO Profiles:Os06g0228200

Genome Context

<gbrowseImage1> name=NC_008399:6647405..6652003 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:6647405..6652003 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcatcgacgacagcgccgtcgaggaccaactctcgggtgaactactcgaacgagatccatgacctctccaccgtgcagagcgtctccgccgtccccagcgtctactaccccgagaaatccttcgccgacatcttccctcctaacctcctcaagaaggtgatatcggaggtggtggcgacgttcctgcttgtgttcgtgacgtgcggggcggcgtccatctacggcgaggacatgaagcgcatctcgcagctggggcagtcggtggtcggtggcctcatcgtcaccgtcatgatctacgccaccggccacatctccggcgcccacatgaacccggccgtcaccctctccttcgccttcttccggcatttcccctggattcaggtgccgttctactgggcggcgcagttcacgggggcgatgtgcgcggcgttcgtgctgcgggcggtgctgtacccgatcgaggtgttggggacgacgacgccgacggggccgcactggcacgccctcgtcatcgagatcgtcgtcaccttcaacatgatgttcgtcacctgcgccgttgccaccgactccagagcggtgggtgagttggcggggttagcagtcggttccgcggtttgcattacgtcgatcttcgcagggccggtgtcaggaggatcgatgaacccggcgaggacgctggcgccggcggtggccagcaacgtctacaccggcctctggatctacttcctcggccccgtcgtcggcaccctctccggcgcatgggtctacacctacatccgcttcgaggaggcccccgccgccgccggcggcgccgccccccagaagctctcctccttcaagctccgccgcttgcagagccagtccatggccgccgacgagttcgacaacgtctaa</cdnaseq>

Protein Sequence

<aaseq>MASTTAPSRTNSRVNYSNEIHDLSTVQSVSAVPSVYYPEKSFAD IFPPNLLKKVISEVVATFLLVFVTCGAASIYGEDMKRISQLGQSVVGGLIVTVMIYAT GHISGAHMNPAVTLSFAFFRHFPWIQVPFYWAAQFTGAMCAAFVLRAVLYPIEVLGTT TPTGPHWHALVIEIVVTFNMMFVTCAVATDSRAVGELAGLAVGSAVCITSIFAGPVSG GSMNPARTLAPAVASNVYTGLWIYFLGPVVGTLSGAWVYTYIRFEEAPAAAGGAAPQK LSSFKLRRLQSQSMAADEFDNV</aaseq>

Gene Sequence

<dnaseqindica>3883..4138#3109..3170#2802..2996#484..708#167..325#gagaccagggcaagcagcagtagcaaagcagaagcagaggcagaggcagcacagcttgatcgttcttccatcgatcgatcggcagctagcgctcacagtactctcgatcgctcgctcgcgctggtccgttgattcgttgtcctagatagatagctaaaggggggccatggcatcgacgacagcgccgtcgaggaccaactctcgggtgaactactcgaacgagatccatgacctctccaccgtgcagagcgtctccgccgtccccagcgtctactaccccgagaaatccttcgccgacatcttccctcctaacctcctcaagaaggtatatatatataatcaagcaataatcctagctagttagcaacgatcgatcgatgatcatcaatcaggatcgagctagctagctagcaaatcaagaacaacaacaagaagaaggagaagataaagtatatatatggtgtacgatgatgtgtgcggcaggtgatatcggaggtggtggcgacgttcctgcttgtgttcgtgacgtgcggggcggcgtccatctacggcgaggacatgaagcgcatctcgcagctggggcagtcggtggtcggtggcctcatcgtcaccgtcatgatctacgccaccggccacatctccggcgcccacatgaacccggccgtcaccctctccttcgccttcttccggcatttcccctggattcaggtaacttaattcatgcacatgcatgaacacatcgatcactcatgcctgctggctatctatctcctttactttatttccattttccatatctcctctccctttctttcttgctttctttcttcctttttcatgggttgtttcggatgaaaaagaaaactctatttcctcaaaaaaaaaaagaaaagaaaaaaggagtttccattaattggttgagttctactaactagtactgttagttagtactcagctccttaatttactccttgtgtttggacatcgatgcaacctcatatattaaccagctacttttcatctccaaatatatactagtaccaaaattctttttcaaaaatcactgtacaaaaatatattttccattatctttcgaaaaaaaaaacttcccgtgaataggagttgtcagcatgtactcctggacgtgcacaggaattagtcacggcttaattaagcaaaactttggagcctacctggcatctaccactccttgaaaaataaatcgcatccactgtacacatggacgatgcataaccttctgacaactgaacatattcgaagcagccagccaaatagttcatcctattcatcaagtagctaggacacacaagttgataaaagagtatataggactggctcataataatgccataaaatatactttccttttttttttgcgaactataaaatatgttttctgcctcagcatatttgtccttacctagtctggcatgaggccagtagcatgcatgaggaattagcaagctgacaaaaaataattggcattactggcaacatgctgggctaatcacaacatgtgaacaagcccatcattcatcagatcgaaccaaggctctaggtaattaaaaaaggacaaaattagaacaaaaaaaaaggagaataagacaatcagtagtagtagtactttttagatgagaaggataaggcaacttgatgcatgatcctctcccatgattaattagctcataattaattcggcttaccatgaaagcctcaatgagttgccactaaccccaaccaccaccacgtaccagcctaagctaaggagagggggtttgacattcgcatggttcccttgttaaccatgtgatttttgatcattgatatccttaatatatttatatgcatacatacggccttgctccctagcaaccatattcccaattattgcgaagccgttcttgcttgtaggtcacaaatacaacatctcacgtacgtacttgagctaaccaaaccatcggccgtgccaacaatggcattaaagtggaatagttctggaatcagccatgatgatagaacccaaatttcaaaaaaagtataacttccagcctctgcaaaaccacgaccatagataataatgcctatatatgcttagaaagttgccgggctttagctatgaaaggcacgtgtgcacgcttctgaatcacgtacgtgccctcaatctgccgtgaaaccacgccggccgccctttcggcgagaagaaattattcgatccgatgcgatgcgatagatgctgtgctcgctcttgcgtgccagtctctcgccacacgcgagcatggctagctaaggatctatagctaattaagctacttgcagcatgtcgatcaatctgacccaacttgcccatacagttagccagccagccatattgcatacttgcatgtctgaatcctgatcgatctgagtgatgcccagagatagatagatagatagatagatacgattattcattctctgcagcgatagatttagatcaagagggggagttcaagaagactccaaagattcgtacgctcttttaattttttttctcccttttcttcccatgtctcgatcggccgtataatcgatcggtcgcgaggagcggcgtgcattgcgttcgcggtcacatcacgatcgtggagctagcaatatatatagctttggttgtgtggcgttttcgatcggatcctctaagcaaagcataatattattgagcgtagtacactacggccgtcggccgtgtggcttatacgtattcgcggctgtgtgactgtggtgtggtggtgtgtggtttgcaggtgccgttctactgggcggcgcagttcacgggggcgatgtgcgcggcgttcgtgctgcgggcggtgctgtacccgatcgaggtgttggggacgacgacgccgacggggccgcactggcacgccctcgtcatcgagatcgtcgtcaccttcaacatgatgttcgtcacctgcgccgttgccaccgactccagagcggtaaatataataatacatttactcacaagattaattaattggcttcttaaatctgctgtaaataattaattacaaaaaaattaattgagatttggtttaattttggttgcaggtgggtgagttggcggggttagcagtcggttccgcggtttgcattacgtcgatcttcgcagggtaattaatgaatcgattactaatgaccacccctaaacttgggaagaattaactagcaccggattagttatttaattaaccgtaatcaaaatattttagtaaccactagtacgctgcatgtagtgggtaatagctaaccatcgtggcttttcaacaaacctctggaaaatctagcttagctgacgacattctttggtagaatcttcgttgttcagcccacataattatttttttttctacagagaatttaaagcgccatatttataacaaggtgtcacacacagactgacgtagagcagagccggactcagatgacttatattagtatacacagtacttagatagttaggttcaaggcacatgcaccaagctagctatgtctctcacatcgatcagccattaagctactgtttaattatgtacttcacaaaacgacgttgctaacatggactcctgattagcctgtacaaaccattctttggacctcctaacactcacacacattattcctgaccgtatcactacaaggacacaacttgcatgtactgactgaaactaaaaaaacttctaaaaaatatataaaataagaaaaggggtaattaaccatagtataaagtagagacgagtagtgaaaaagatcagtatgtgttgattaatggggatgtatagctgattaagacgcggcgaaatacgacgcgagtggaaattgcaggccggtgtcaggaggatcgatgaacccggcgaggacgctggcgccggcggtggccagcaacgtctacaccggcctctggatctacttcctcggccccgtcgtcggcaccctctccggcgcatgggtctacacctacatccgcttcgaggaggcccccgccgccgccggcggcgccgccccccagaagctctcctccttcaagctccgccgcttgcagagccagtccatggccgccgacgagttcgacaacgtctaatcgccctgacgccatggacccacaccgtactgctatactgtatacgtatatacatatgtatgtatgtactgcacgcgtacgtacgtacgcacgtgcacgagcgcgggaagccattgtttgtacgatcgacgactctaccaagtcgaaatgtaatgtgtacggtgtctgtgtacgtgtggtggtgctgtgtgtacgtgggcccgctctgcttgaagaagaagagagagcttgagctagctatacgtgtatacatgtaccgtgtactatacgtacgtgcgtatttgtcttttttttttcctctcttccctgcgcctacgtgcgtatgtacgtacgctttctctcgctggtataatcagctggcgatcgatagcggcaaaaatatgttatgtgttcgtgtcagtctctttggctttgtattaaaaatcaatctgagttaatgaaggagctgagctttgcttgtc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0228200, RefSeq:Os06g0228200