Os06g0228500

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Revision as of 09:11, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0228500| Description = Amino acid/polyamine transporter II family protein| Version = NM_001063743.1 GI:115467217 GeneID:4340559| Length = 2...")
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Gene Name

Os06g0228500

Description

Amino acid/polyamine transporter II family protein

Version

NM_001063743.1 GI:115467217 GeneID:4340559

Length

2579 bp

Definition

Oryza sativa Japonica Group Os06g0228500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:6677246..6679824

Sequence Coding Region

6677275..6677350,6677806..6678419,6679111..6679662

Expression

GEO Profiles:Os06g0228500

Genome Context

<gbrowseImage1> name=NC_008399:6677246..6679824 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:6677246..6679824 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaaaccaacactcctccaaagtctgggacaagctttctcaagacttgcttcaatggtgtcaatgccctctcaggtgttgggatactatccatgccttacgcattgtcccagggaggatggctgagcctagcaatcttcataaccatagcagcgatctgcttctacacggggatcctcctgcagcgatgcatcgactccagctccctcgtcaagacctacccggacatcggcgagctggcgttcggccggaagggcaggatcgccgtcgccgccttcatgtatctcgagctctacctcgtcgccatcgacttcctcatcctggagggggacaacctggagaagctgttcccgaacgcgagcttcttctcctccttccacaggatcgccggcgggacgaggcaagggttcgtgctgctgttcgcgctgctcgtgctgcccacgacgtggttccggagcctcgacctcctggcgtacgtctccctgggcggcgtcctggcgtccgccatcctcgtcgcgtccgtgctctgggtcggcgccgccgacggcgtcgggttccgcgagggcggcgtggcggtgaggtggggtggcgtcccgaccgccatgagcctgtacgcgttctgcttcagtggccatgcggttttccccatgatttataccggcatgaggaacaggagaatgtttccacatgtgctgctcatctgcttcatcatctgcaccctcgcctacggcgtgatgggcgtcatcggctacctcatgtacggcggctcgctccggtcgcaggtgacgctcaacctgccggcgaggaagctgagctccagcatcgccatctacacgacgctcatcaaccccttcaccaagttcgccctcctcatcaccccgatcgccgaggccatcgagggcgtcctcggcctcggcaccgccaccaccggcggcaagccggcgcagtacagggccgcggccgtgagcgtgtcggtgaggacggcgctggtggtgagcaccacggcggtggcgctcgccgtgcccttcttcgcctacgtggtggcgctcaccggctcgttcctcagcgccaccgcgacgatgctgctgccgtgcgcgtgctacctccggatcagctccagggcctccgggaagctgggggtgctcgagatcgtggcttgcgtggggatcatcgtgcttgggttaggagtgatcgtgataggcacttacagctcgctgaaacagattgtgcagagcttctga</cdnaseq>

Protein Sequence

<aaseq>METNTPPKSGTSFLKTCFNGVNALSGVGILSMPYALSQGGWLSL AIFITIAAICFYTGILLQRCIDSSSLVKTYPDIGELAFGRKGRIAVAAFMYLELYLVA IDFLILEGDNLEKLFPNASFFSSFHRIAGGTRQGFVLLFALLVLPTTWFRSLDLLAYV SLGGVLASAILVASVLWVGAADGVGFREGGVAVRWGGVPTAMSLYAFCFSGHAVFPMI YTGMRNRRMFPHVLLICFIICTLAYGVMGVIGYLMYGGSLRSQVTLNLPARKLSSSIA IYTTLINPFTKFALLITPIAEAIEGVLGLGTATTGGKPAQYRAAAVSVSVRTALVVST TAVALAVPFFAYVVALTGSFLSATATMLLPCACYLRISSRASGKLGVLEIVACVGIIV LGLGVIVIGTYSSLKQIVQSF</aaseq>

Gene Sequence

<dnaseqindica>30..105#561..1174#1866..2417#aagagcactcaggagttctctgaattctgatggaaaccaacactcctccaaagtctgggacaagctttctcaagacttgcttcaatggtgtcaatgccctctcaggttttatttcttccatcctgcctctcgtgatcttaatcaagctaagacatcaagtactacctgatgttttatgttgttaagaaagatgccatatattttctttatttaacattataacatactaaggtaattttaccatatttgaaaatgaaccggaagataccatatgttctaatataaaacttgttacctttatatactagataccaaattttatttttatctttttacaagtgctgtctcgaaaaccgtaaaattcaccacgtactaaaactaacttaaaatgttgggaaagtgatttcatctgtcgaggggatattctcttgtttcgtacatgtcacctaaatagtcataaaaaaatttgacaaaattaatatgaaatatatcactccacaaatatgcaagttaaaatttaacttctaaaatgtttgtttctgtttttttcttttcttcaggtgttgggatactatccatgccttacgcattgtcccagggaggatggctgagcctagcaatcttcataaccatagcagcgatctgcttctacacggggatcctcctgcagcgatgcatcgactccagctccctcgtcaagacctacccggacatcggcgagctggcgttcggccggaagggcaggatcgccgtcgccgccttcatgtatctcgagctctacctcgtcgccatcgacttcctcatcctggagggggacaacctggagaagctgttcccgaacgcgagcttcttctcctccttccacaggatcgccggcgggacgaggcaagggttcgtgctgctgttcgcgctgctcgtgctgcccacgacgtggttccggagcctcgacctcctggcgtacgtctccctgggcggcgtcctggcgtccgccatcctcgtcgcgtccgtgctctgggtcggcgccgccgacggcgtcgggttccgcgagggcggcgtggcggtgaggtggggtggcgtcccgaccgccatgagcctgtacgcgttctgcttcagtggccatgcggttttccccatgatttataccggcatgaggaacaggagaatgtttccacatgtaagtaaagcagaagtttgtttcttttacagtcttatataaagggtaattttaccatctttgaaaaaaataccgaccacactttctagcgtaaaatttagtacatatagatactaagtacgtcaaggtataaaaaaattaatataaaatttaggtacccgaggtattttttatggaccataaaacttttgtatataaaagcacagtaatcctctccccaccctacacaggaggtcgtccgctccttcgtgtttgcgtaactagtataggatttagtaatttatccttaattcatacacctagctaaatctctaattatatggatgcggcctgttgcaaatcacggatatattactggtaaataatagtagaagtgttagttgtaaagcactacaactatctgctgaaaactagtactactaatgatctcaggtctcagccaggcaaactgtttggataattttgctttacagtcagtagtacaaaatgtttaacctttttgactggtagtgtatgataaaaagttatgttgttgcccatgcaaattttaaccacggtaaccttgtcaaactttccaattgcataaagcattgctatatatgctaattccgtctcaatcgtgtgctttaattgagtttattaacaactaatcaataactttattttttctaccaacttaaccaaatcccaggtgctgctcatctgcttcatcatctgcaccctcgcctacggcgtgatgggcgtcatcggctacctcatgtacggcggctcgctccggtcgcaggtgacgctcaacctgccggcgaggaagctgagctccagcatcgccatctacacgacgctcatcaaccccttcaccaagttcgccctcctcatcaccccgatcgccgaggccatcgagggcgtcctcggcctcggcaccgccaccaccggcggcaagccggcgcagtacagggccgcggccgtgagcgtgtcggtgaggacggcgctggtggtgagcaccacggcggtggcgctcgccgtgcccttcttcgcctacgtggtggcgctcaccggctcgttcctcagcgccaccgcgacgatgctgctgccgtgcgcgtgctacctccggatcagctccagggcctccgggaagctgggggtgctcgagatcgtggcttgcgtggggatcatcgtgcttgggttaggagtgatcgtgataggcacttacagctcgctgaaacagattgtgcagagcttctgatcatttatgggcaaaggtagtaggagatgagcaattgggatcagctactgaaaattgacatatactagtcaattcgataccactgattaggacaggtggtgtcaaccatgatgttatgcataaatcacttgagaaagaaatccatatgccgtgtattcaggt</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0228500, RefSeq:Os06g0228500