Os06g0228600

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Revision as of 09:11, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0228600| Description = Similar to Amino acid carrier| Version = NM_001063744.1 GI:115467219 GeneID:4340560| Length = 3511 bp| Definition =...")
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Gene Name

Os06g0228600

Description

Similar to Amino acid carrier

Version

NM_001063744.1 GI:115467219 GeneID:4340560

Length

3511 bp

Definition

Oryza sativa Japonica Group Os06g0228600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:6681438..6684948

Sequence Coding Region

6681581..6682222,6682415..6682554,6682897..6683114,6683224..6683317,6683431..6683667
,6684697..6684820

Expression

GEO Profiles:Os06g0228600

Genome Context

<gbrowseImage1> name=NC_008399:6681438..6684948 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:6681438..6684948 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtcggtcgacttggagctggggcgacctctgtcggcggcggcggcggcgtaccctcctccgctgcggcggagcatcaacgacgacgacgttgacgacgacgggaagcccaagcgaacaggaacggagtggacggcgagcgcgcacatcgtcacggcggtggtcggctccggcgtgctgtcgctggcatggtccacggcgcagctcggctgggtcgccggcccggccaccctcgtcgtgttcgcggtcatcacctactacacctccgtgctcctcgccgactgctaccgcgccggcggcgatcaggtctccgggaagaggaactacacatacatggacgccgtcgagtcctatctaggtggtcggcaagtgtggttctgtggtctctgtcagtacgttaacctggttggaactgcaatcgggtacaccatcacagcatccatcagtgccgcggcggtgtacaagtccaactgcttccacaagaacggccactccgccgactgcagcgtcttcaccacctcgtacatggtggtgttcggcgttgtccaggtcttcttctcccagctgcagagcctccacgaggtggcgtggctgtccgtgctcgccgccgtcatgtccttctcctactcggccatcgccgtcggcctctccttggcacaaaccatatcaggtcctactggtatgacgactatgtctgggactgtaatcggaatagatgttgatttgtcgcacaagatatggcaggcactgcaagccctcggaaacatcgcgttcgcatattcctactccctggttctcattgaaatccaggacacgatcaggtcgccgccggcggagagcaagacgatgaggaaggcgaacgcgctggccatgccggtgatcacggcgttctacacgctctgcggctgcctcggctacgcggcgttcgggaacgcggcgccggggaacatgctcacgggcttcggcttctacgacccctactggctcgtcggcctcgccaacgcctgcatcgtcgtgcacctcgtcggcgcctaccaggtgatgtcccagcccgtcttcaccgccgtcgagtcctgggcgtcctcccggtggccccggtgcggcttcttcgtcaccggcggcggcggaacgaggctgatcagcgtgaacgcgttcaggctcgcgtggcgcacggcgtacgtcgtggcgtgcaccgcggtcgccgccgtggtgccgttcttcaacgacgtgctcggcctcctcggcgccgtcgggttctggccgctcaccgtgtacttccccgtggagatgtacatccggcggcggaagctggagaggtcgtccaagaggtgggtggcgctgcagagcctcaacgccgtgtgcttcgtggtgacgctcgcctcagcggtcgcgtccgtgcaggggatcgccgaatcgatggcgcactatgtaccgttcaagtcaaagttgtaa</cdnaseq>

Protein Sequence

<aaseq>MASVDLELGRPLSAAAAAYPPPLRRSINDDDVDDDGKPKRTGTE WTASAHIVTAVVGSGVLSLAWSTAQLGWVAGPATLVVFAVITYYTSVLLADCYRAGGD QVSGKRNYTYMDAVESYLGGRQVWFCGLCQYVNLVGTAIGYTITASISAAAVYKSNCF HKNGHSADCSVFTTSYMVVFGVVQVFFSQLQSLHEVAWLSVLAAVMSFSYSAIAVGLS LAQTISGPTGMTTMSGTVIGIDVDLSHKIWQALQALGNIAFAYSYSLVLIEIQDTIRS PPAESKTMRKANALAMPVITAFYTLCGCLGYAAFGNAAPGNMLTGFGFYDPYWLVGLA NACIVVHLVGAYQVMSQPVFTAVESWASSRWPRCGFFVTGGGGTRLISVNAFRLAWRT AYVVACTAVAAVVPFFNDVLGLLGAVGFWPLTVYFPVEMYIRRRKLERSSKRWVALQS LNAVCFVVTLASAVASVQGIAESMAHYVPFKSKL</aaseq>

Gene Sequence

<dnaseqindica>2727..3368#2395..2534#1835..2052#1632..1725#1282..1518#129..252#gagatgatgcagtcgtccatagtagtataacacagctagcaactcgcttaaaaaggcgaggacgcgcgcgtagacgacggagcgatcgatcgccgccgatcggcttggctgaaggcgagaaggtagggatggcgtcggtcgacttggagctggggcgacctctgtcggcggcggcggcggcgtaccctcctccgctgcggcggagcatcaacgacgacgacgttgacgacgacgggaagcccaagcgaacaggtaggcgatcgaactgatcatgatcgaccaatgtacgttaattccgacatgtgattttgctaagcttttttgccccttttgatcatgcaacatgcatgggcgatcggcatgatataattaagttactttggaaattaggtcctgatttggtgtaccttaatctccttcttggtcacctctttgttattttatttttttctttctatcgctagtagaaaaatgattttctcagctcccacctttaattcataggcggattaaaatgcgaaatgtctgctttaagtctgagaaattttatgatcattgaaaaagtatctagaggtaccatactaaattttatactagaaaatgtggtactttccgataccttcctaagatgagaaaattatactttaagagcatcaccaacagtttacctatatgattctcaaaactaatcttgagggattttagtccaaaaatcagctccaacagatctcttactctcctacccaagttttggagttcccttcccccggttcctccctttgtttatatgcgggcgcgaaagtcgctcccaatcacgcaatcccgcctctctccttcgtttccgcgcgtgggagatagcgatctttctgcgcgtgaaagaaaaaaaaggaattttctttttgtagtttaacggaagggcccacttttaagtttcggggattgaatttaggctatctgttgggggaggagttttttcacttcctattttcaatttaggaaaaccaaaaataaatttttaggagaaaattatagataatctgttggtgatgctctaagtttactgggtatatagggggtttacgaattgaccatgtaaatagaatgctacagcccatgggtgggtgccgcccatgaaaattatttttacagggtaatttcttgatgcaactgtaaagatatttgatttctgcaggcaggtcggaaaacacctgtgttatacggataaatatgttttccgtagtagtgtatatatgttactgattcttgtgatttgacgagcaggaacggagtggacggcgagcgcgcacatcgtcacggcggtggtcggctccggcgtgctgtcgctggcatggtccacggcgcagctcggctgggtcgccggcccggccaccctcgtcgtgttcgcggtcatcacctactacacctccgtgctcctcgccgactgctaccgcgccggcggcgatcaggtctccgggaagaggaactacacatacatggacgccgtcgagtcctatctaggtacgttctgctactactgctgctgcatgaaccaacgactcaacgatcgaattacctgtacattcagttatttttactgtattctgtatatattttcatgtgtatatatgcaggtggtcggcaagtgtggttctgtggtctctgtcagtacgttaacctggttggaactgcaatcgggtacaccatcacagcatccatcagtgccgcgtaagccatcaaattagctcaaatgctgtttctaattcatcgatatcattggtgtgtgtgtgtttctgaattttctgatcaaaactgcgtgcgtggatggattctgcagggcggtgtacaagtccaactgcttccacaagaacggccactccgccgactgcagcgtcttcaccacctcgtacatggtggtgttcggcgttgtccaggtcttcttctcccagctgcagagcctccacgaggtggcgtggctgtccgtgctcgccgccgtcatgtccttctcctactcggccatcgccgtcggcctctccttggcacaaaccatatcaggtaacttaagaagaacacacatctttgccttggttttattgctgatcttgatgagaatttctggtggttaaggacttgtttggcatggtttcagcgccagctccacatctcctggagctggagcccagccaaacactttcagctccacctaaaatggaagtggagttggctggaatgtaacgctatcacaaaatgagctagagatgtggagctgggtttaggctgctccacaactccactccagatctaatttgtggagttaaatttaggagtgaagctctattaaacggatcctaattcaggttcatacttctgacactgtacatgtttgtgttttcgcaggtcctactggtatgacgactatgtctgggactgtaatcggaatagatgttgatttgtcgcacaagatatggcaggcactgcaagccctcggaaacatcgcgttcgcatattcctactccctggttctcattgaaatccaggtaactgtacaaaattaagttgggttttggttagtttggaataacttagttttcaggaaaagattgaagatcattcttttactatacctaactgcatggagctcttaaagaaattcttgcaatgaaatgtgacttacgctctgtagtaaatttactcaaaattaatttgttgtgtgtttacgagcggtgcaggacacgatcaggtcgccgccggcggagagcaagacgatgaggaaggcgaacgcgctggccatgccggtgatcacggcgttctacacgctctgcggctgcctcggctacgcggcgttcgggaacgcggcgccggggaacatgctcacgggcttcggcttctacgacccctactggctcgtcggcctcgccaacgcctgcatcgtcgtgcacctcgtcggcgcctaccaggtgatgtcccagcccgtcttcaccgccgtcgagtcctgggcgtcctcccggtggccccggtgcggcttcttcgtcaccggcggcggcggaacgaggctgatcagcgtgaacgcgttcaggctcgcgtggcgcacggcgtacgtcgtggcgtgcaccgcggtcgccgccgtggtgccgttcttcaacgacgtgctcggcctcctcggcgccgtcgggttctggccgctcaccgtgtacttccccgtggagatgtacatccggcggcggaagctggagaggtcgtccaagaggtgggtggcgctgcagagcctcaacgccgtgtgcttcgtggtgacgctcgcctcagcggtcgcgtccgtgcaggggatcgccgaatcgatggcgcactatgtaccgttcaagtcaaagttgtaaaggaaaaaaaaaagaacggtctatgcaccatttgctgttaacctgataggaatgtgaccgtacgagtactttgagattcatgctggacaacaaaacccaaagagagttgctacaaaacaggatcccgttgcaacgggatagac</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0228600, RefSeq:Os06g0228600