BGIOSGA029511

From RiceWiki
Revision as of 17:18, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA029511

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA029511, complete gene.

LocusTag

OS09G0497100

Ensembl Transcript ID

BGIOSGA029511-TA

Ensembl Protein ID

BGIOSGA029511-PA

Length

5522

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:17854872..17860393

Sequence Coding Region

17859764..17860393,17857685..17859033,17857447..17857588,17857166..17857273,17856157..17856369
,17855963..17856073,17855576..17855770,17855025..17855196,17854872..17854918

Genome Context

<gbrowseImage1> name=IndicaChromosome09:17854872..17860393 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:17854872..17860393 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTACAGAGAGTGCTCGGCCGTTGAGTGGAGGAACTGGAGCAGGGAAGTGGCCACCAAGCAAGGACACGGGTTCCTATGATTCTATTCCAGCTAGCCTTTCAGAAGATGAGTTAGCGGAGTTGGCCTTCATGCCAAATAGTGGCGGCATTTTTGGGAAGTGGAGGGGTTCTGTCCTGAAACGCAGTGGAAGCGCTCCTCCTACCATGGAAGGTTCTTTAGTTGCACTTGGTCACCTCACAGGTCAACCGAGTGGCAACCTTGGGGCCATACTGCCAAACTTGGGCACTGAAGCTAACAATTCAGAGTCTAAGGAGAATATATATTATGATTCGGCATGCGTCAAATACTATATGTCCAAGGTGAATTTGAACCCAAGGTTTCCTCCACCACTCGTTTCAAGGAACCAGTTTGGCAAGTCTGAAGAACGAAAGCCGTTCTCCCTTGATGACAGCAGCAGCAGGTCCTTACTTCTTGGTCATCCTACTCTGCCAACACACAAGGAAGAACCTGAGGACGAAAAGTCACCAAGTTTGGATTCAAGTTCAGCAGACGATGCTCAATGTGATTCTGCCCAAAGCACATCTAACTTAGGGGGCCACAGTCCAAATCTTGTAGATTCAATTAAGGAAAACTTTCATCGGAGCAATGGTTTGTATGATAATTCTTCCGATCTTTTAAATGCAAACTCTGGTGATGGAGGGTCGATTTATTCTGGCATTAATTCATCGAAGAATTCCTCACTTTATGTTGTCCAGTCATCAGACTTGAATGGATTTCCACCAGATGCTCATCAACGTTCCCCTAGACCTATTAGGACTCCAGTCAGTACAAAACTTACTAGCGACAGTCTGCCAGCTTCATCTCCTCCCACCTCATCCTGTTCTGACTACAGTACTATTACTGAAGCTTGTCAGCAAAGAAATCCAAGCATGGCCGTTAAACCTGGTGAACCAGTTGGTACCATGCTTGATAGTTCAGACTTCAGTCTGAAGAATTTGAATATTAGTCCGGATATCCTAAGTAGTTCATATGTCATGCAACAGTGGCAGAAAAATGCCCCAGTGTGGAATGGCCTATCAAATGTAGTCCATGGCGATCATGTGCCAATGATTCCTCCAGGAATTAATCTTCCTCAAGTTCCATTTGTGGACAATTCCGGTTTTGGTCATATGAAGTTCCCTGGTGATGTTCAACTGATGTCCCAGATCGGGATGGCAACACCTTTTTGTACACCAAATTCTTTTGGGATACCATGTTATCCTAATTTGCAGTCGCCTAGTGTTTGGGTTCCTCCATTCGGAATCGGCGGCTATGGTTTGCCTGGTCCATTTGTCCCACCTGTTATAACTAACTTCACTCCTCAACTTCCTGGTTTTCCTTCAGCAGTAAATCTTGCTGCAGCAACTGACTTATTTCACCCATATAAGATGTATGAGCATCTTGGGGTACCTATGCCATCCCCTGTTCCTGATCAGAGCCTTACGCATTATTTTCAACAGCCCCCTATCCATCCGTATGGTGTTGGAAATCCATATGATACAATGGTTTCAAGTAATAATTTTGTAGGGAATCCTGCTGGCGTTTTTGGTTCACCAATCATTGACCCATCAGAGCAGAAGTTTCAGATACCGGTTACTACTGTAGCTGCTAATGCCTCTACTCCCATCAAAGGTGGAAAGGCCATTGGGAATTATGAGACTGCCTCACCTTACTTTGGCGTACCGATGCCTTATCCAGCAGGTCCAACATTACATGGGAAACCTGCTTCTGGAACATCTCCTCGTGACAAAAGGAACGATGTCAAGGGATTCCAACCCCCTCGAAAAAATATGCCTGTTAGTTCCGAGATACAAGGTCAGAAAGGGAGGGAGAAGTTTGATGATCCCAAGGCACACTTTTCTGTTGAAGAACTAATATCCAGCAGAACTCATAGGGTTGAGCTGGCTGACATCAAAGGACAGATAGTGAAATACAGCTCGGACCAAAATGGTAGCCGGTTCATTCAGCAGAAACTGGAGAATTGCACCATTGAAGAAAAGGATTTACTTTTTGCCGAGGTCCTTCCTCATGCTTTGGAATTGATGACTGATGTATTCGGAAATTATGTTATTCAGAAGTTCTTCGAAAAGGGGAGCCCACAGCAAAAGAGAGAAATAGCTAATAAGCTTGCCGGTCATGTGTTTTCTTTGAGCCTTCAGATGTATGGATGCAGAGTAATTCAGAAGGCCCTTGAAGTAATTGATCTTGAACAGAAAATTGTTCTTGTTGGTGAACTCGATGGACATGTGCTGCGATGTGTTCATGACCAAAATGGGAATCATGTTATACAAAAGTGCATTGAATGTATTCCATTGGAACATATTGGTTTTCTGGTGTCATCTTTTCAGTGCCAGGTTGCCAAACTGTCAATGCATACATATGGATGTCGTGTTATTCAGAGAATCCTCGAGCGTTGCAGCAATAATTCTGAATGCCTTTGCATAATTGATGAAATCTTGCAGTCTGCTTGCATCCTCGCACAAGATCAGTATGGGAACTATGTTGTGCAGCATGTTTTGGAGAAAGGGAATGAACATGAAAGGGGCCAAATCATCACTAAATTGGCTGGGCAGGTAGTACCCATGAGCCAAAACAAATTTGCATCTAATGTCATAGAGAGGTGTTTTGAACATGGGGGCAGTGCAGAGCGGGAACTTTTGGTCAAGGAGATTCTGAAGCAAACTGAGGGCAATAACTATTTGCTGGTGATAATGAAGGACCAGTATGCTAATTATGTGGTACAGAAGATGCTTACAACATGCAATGAACAACATAAGGAGATCCTTCTCAGTCGTGTGAAAATCCATTTGCCATTATTGAAGAAATACACCTATGCCAAGCACATCGTCAGCCTAGTCGAGCGCCTCTGCGGTGACGGAGCTGTGCAGTCCGAATCCAAAAAAACTGTAACCAAGGGCTGCTGA</cdnaseq>

Protein Sequence

<aaseq>MATESARPLSGGTGAGKWPPSKDTGSYDSIPASLSEDELAELAFMPNSGGIFGKWRGSVLKRSGSAPPTMEGSLVALGHLTGQPSGNLGAILPNLGTEANNSESKENIYYDSACVKYYMSKVNLNPRFPPPLVSRNQFGKSEERKPFSLDDSSSRSLLLGHPTLPTHKEEPEDEKSPSLDSSSADDAQCDSAQSTSNLGGHSPNLVDSIKENFHRSNGLYDNSSDLLNANSGDGGSIYSGINSSKNSSLYVVQSSDLNGFPPDAHQRSPRPIRTPVSTKLTSDSLPASSPPTSSCSDYSTITEACQQRNPSMAVKPGEPVGTMLDSSDFSLKNLNISPDILSSSYVMQQWQKNAPVWNGLSNVVHGDHVPMIPPGINLPQVPFVDNSGFGHMKFPGDVQLMSQIGMATPFCTPNSFGIPCYPNLQSPSVWVPPFGIGGYGLPGPFVPPVITNFTPQLPGFPSAVNLAAATDLFHPYKMYEHLGVPMPSPVPDQSLTHYFQQPPIHPYGVGNPYDTMVSSNNFVGNPAGVFGSPIIDPSEQKFQIPVTTVAANASTPIKGGKAIGNYETASPYFGVPMPYPAGPTLHGKPASGTSPRDKRNDVKGFQPPRKNMPVSSEIQGQKGREKFDDPKAHFSVEELISSRTHRVELADIKGQIVKYSSDQNGSRFIQQKLENCTIEEKDLLFAEVLPHALELMTDVFGNYVIQKFFEKGSPQQKREIANKLAGHVFSLSLQMYGCRVIQKALEVIDLEQKIVLVGELDGHVLRCVHDQNGNHVIQKCIECIPLEHIGFLVSSFQCQVAKLSMHTYGCRVIQRILERCSNNSECLCIIDEILQSACILAQDQYGNYVVQHVLEKGNEHERGQIITKLAGQVVPMSQNKFASNVIERCFEHGGSAERELLVKEILKQTEGNNYLLVIMKDQYANYVVQKMLTTCNEQHKEILLSRVKIHLPLLKKYTYAKHIVSLVERLCGDGAVQSESKKTVTKGC</aaseq>

Gene Sequence

<dnaseqindica>1..630#1361..2709#2806..2947#3121..3228#4025..4237#4321..4431#4624..4818#5198..5369#5476..5522#ATGGCTACAGAGAGTGCTCGGCCGTTGAGTGGAGGAACTGGAGCAGGGAAGTGGCCACCAAGCAAGGACACGGGTTCCTATGATTCTATTCCAGCTAGCCTTTCAGAAGATGAGTTAGCGGAGTTGGCCTTCATGCCAAATAGTGGCGGCATTTTTGGGAAGTGGAGGGGTTCTGTCCTGAAACGCAGTGGAAGCGCTCCTCCTACCATGGAAGGTTCTTTAGTTGCACTTGGTCACCTCACAGGTCAACCGAGTGGCAACCTTGGGGCCATACTGCCAAACTTGGGCACTGAAGCTAACAATTCAGAGTCTAAGGAGAATATATATTATGATTCGGCATGCGTCAAATACTATATGTCCAAGGTGAATTTGAACCCAAGGTTTCCTCCACCACTCGTTTCAAGGAACCAGTTTGGCAAGTCTGAAGAACGAAAGCCGTTCTCCCTTGATGACAGCAGCAGCAGGTCCTTACTTCTTGGTCATCCTACTCTGCCAACACACAAGGAAGAACCTGAGGACGAAAAGTCACCAAGTTTGGATTCAAGTTCAGCAGACGATGCTCAATGTGATTCTGCCCAAAGCACATCTAACTTAGGGGGCCACAGTCCAAATCTTGTAGATTCAATTAAGGTAATTCCCGTATTAATTCAAGAACTAGCTCTGATTGTTTTTTCCACATGCACTCAAACAAACTTCGTGGCGCTGTTCGGTTGTGGGTTTTGCAGCAGCTGCACCTGGTTTCTGCGGCTGTGGTGCACAGCTGTGGCTACTAGTAGCAGCTGCAGCCGCAGCCAAAAAAATGGCAGCCGGAGAAGGCTAATGTTTTCATCCGTGACATAACTCCATTTTTGTATCCTCAAATATTAAAGTCAAGAAATCTTTATGCACGGCTATACAGTAGCAGTCGGCTTCACAGACCACAAGAATGGTAGTCAGCTAAGACTTAGTAAGGTGAAATAATACAGTATAACATATGATTAATGCCCCCTGTGATATACAAACAAACATTTCCAATATTCAGTGTCTAAGACGTTTTCCAAAAACTCACTTATTTGAAATAGTAACTGGAAATTCTGATTTAAACTAATTGATCTTTATTATGTAGTATCTGCTAAATAAAATCAAAACATGTTTTTGTTTCAAGGAAATGTGATGGGAATCGCACTAAACCTTGCAATTCCTTAATACAAGTACGACAAGAAAAGAAGTATTGATTGTACTCCTCCATAAACATTGTTATTTACCAACTCTCATGCATGCAGATGAACTCCCTAATATCTTATAATCATGTTCTGTTTTGCTACAGAGTTTGTTGCTGCAGTCTGCAGATACTTATTGATAATGATTTCTTTTTGTTTAGGAAAACTTTCATCGGAGCAATGGTTTGTATGATAATTCTTCCGATCTTTTAAATGCAAACTCTGGTGATGGAGGGTCGATTTATTCTGGCATTAATTCATCGAAGAATTCCTCACTTTATGTTGTCCAGTCATCAGACTTGAATGGATTTCCACCAGATGCTCATCAACGTTCCCCTAGACCTATTAGGACTCCAGTCAGTACAAAACTTACTAGCGACAGTCTGCCAGCTTCATCTCCTCCCACCTCATCCTGTTCTGACTACAGTACTATTACTGAAGCTTGTCAGCAAAGAAATCCAAGCATGGCCGTTAAACCTGGTGAACCAGTTGGTACCATGCTTGATAGTTCAGACTTCAGTCTGAAGAATTTGAATATTAGTCCGGATATCCTAAGTAGTTCATATGTCATGCAACAGTGGCAGAAAAATGCCCCAGTGTGGAATGGCCTATCAAATGTAGTCCATGGCGATCATGTGCCAATGATTCCTCCAGGAATTAATCTTCCTCAAGTTCCATTTGTGGACAATTCCGGTTTTGGTCATATGAAGTTCCCTGGTGATGTTCAACTGATGTCCCAGATCGGGATGGCAACACCTTTTTGTACACCAAATTCTTTTGGGATACCATGTTATCCTAATTTGCAGTCGCCTAGTGTTTGGGTTCCTCCATTCGGAATCGGCGGCTATGGTTTGCCTGGTCCATTTGTCCCACCTGTTATAACTAACTTCACTCCTCAACTTCCTGGTTTTCCTTCAGCAGTAAATCTTGCTGCAGCAACTGACTTATTTCACCCATATAAGATGTATGAGCATCTTGGGGTACCTATGCCATCCCCTGTTCCTGATCAGAGCCTTACGCATTATTTTCAACAGCCCCCTATCCATCCGTATGGTGTTGGAAATCCATATGATACAATGGTTTCAAGTAATAATTTTGTAGGGAATCCTGCTGGCGTTTTTGGTTCACCAATCATTGACCCATCAGAGCAGAAGTTTCAGATACCGGTTACTACTGTAGCTGCTAATGCCTCTACTCCCATCAAAGGTGGAAAGGCCATTGGGAATTATGAGACTGCCTCACCTTACTTTGGCGTACCGATGCCTTATCCAGCAGGTCCAACATTACATGGGAAACCTGCTTCTGGAACATCTCCTCGTGACAAAAGGAACGATGTCAAGGGATTCCAACCCCCTCGAAAAAATATGCCTGTTAGTTCCGAGATACAAGGTCAGAAAGGGAGGGAGAAGTTTGATGATCCCAAGGCACACTTTTCTGTTGAAGAACTAATATCCAGCAGAACTCATAGGGTTGAGCTGGCTGACATCAAAGGACAGATAGTGAAATACAGGTTAGTTTTGATTTTGGTTGTTTCATTCACTATCTAGATGCACATAACCCAATGAAAAGCTTGAGATATTAATTGTTATTATGTTCTTGTCCTCAGCTCGGACCAAAATGGTAGCCGGTTCATTCAGCAGAAACTGGAGAATTGCACCATTGAAGAAAAGGATTTACTTTTTGCCGAGGTCCTTCCTCATGCTTTGGAATTGATGACTGATGTATTCGGAAATTATGTTATTCAGAAGGTATAGTATTTCCTTTTCTTATATGATTCATTTTATGGTAATTTTTTTATGAATAGTACACCTATTGAACTTGAACAATTGTACCCCCTTTTAAGATATTACAGTATCATAGCAGCAATTATGAAAAATAATTTATATTTGTATGAAATGAAAATAACATGTAGTACATGCAGTTCTTCGAAAAGGGGAGCCCACAGCAAAAGAGAGAAATAGCTAATAAGCTTGCCGGTCATGTGTTTTCTTTGAGCCTTCAGATGTATGGATGCAGAGTAATTCAGAAGGTAGTCTTGACTTCTTTATGGGAAGTATAACTTTATTTCTGCTTAATGTTTTGGATACCATATCATGAAAACCTTTTCAGTGGCACACTATAGCATGTATTGTCTGAGGCGGTCTGAGCAAATTTTCTTCAGACTGTTATGCTATCCATAGACTTATTTATTCTCAATATCAGTTGGCAAAGTATTATCTGAGTAAATTTTCTTCAGACTGTTATTCTATCCATAGAATTGTTTATTCTGAACATCAGTTGGTAAGTTTTAAAGTGGTTAGCCTGTTGGACATCATTTCTCATATTATGCATGGTTATCAGCATACATTCTTTTAATAAGTTGCAATCCCACTGTAGCCAGCTATTCATGGATTAGCATGTGTTGGAAATGAAAAATAATGTGACTTATAAGTTGCAATCCCATTATATCCCGTTATTCACACATTTTACTTGCTATATTCCTGGAGAACTCATTTTCAGATGAGTTTTGTGTTATTCTCATATATAATGGATACATAGAAATGCTCTCTTACTACCACACACAGACTAAGTGGTTGCACATTAATGTAATTAAACTGAACCACAACTAAAAAGATTAGGAACACACACCAGACAAGACAAGTAGTCAATGTCAGGTTATGTGTGTTCGCATTTTCATCATTCGTCGTAAGTTTTTATTAGCAATTATGCTATTTAGACAGTCTTGTGAATTGTTTGTTGACACTGCTACACTGTCTTTTCTGGACGTTATCGCTATTTGAACTCAAATGCCAATTTCACTGCCTACTTCACTGCTACAATTGCAGGCCCTTGAAGTAATTGATCTTGAACAGAAAATTGTTCTTGTTGGTGAACTCGATGGACATGTGCTGCGATGTGTTCATGACCAAAATGGGAATCATGTTATACAAAAGTGCATTGAATGTATTCCATTGGAACATATTGGTTTTCTGGTGTCATCTTTTCAGTGCCAGGTTGCCAAACTGTCAATGCATACATATGGATGTCGTGTTATTCAGGTGAATTGGTAACGATGTTGTATTTTTGTTAATTTCTTGTCATTTTCTTGTGGTGTTGATCATATTCACATTCTGCTTGGCAGAGAATCCTCGAGCGTTGCAGCAATAATTCTGAATGCCTTTGCATAATTGATGAAATCTTGCAGTCTGCTTGCATCCTCGCACAAGATCAGTATGGGAACTATGTTGTGCAGGTGATTTTCTTCTTATTCTCCAAAACTTAGTGGCTGATTTGACTAAATTTTCATTAATATAAACCATCAGCATCTTGTTGCTGTAATACGGATAGCTATTTTGAGTTAGAGCAAGTGTAACTTAAGTAGCTGATGTTGAATTTGGCAACCTGCAGCATCTTTGCCTTTATTATAACCATGTGTATTTTGCAGCATGTTTTGGAGAAAGGGAATGAACATGAAAGGGGCCAAATCATCACTAAATTGGCTGGGCAGGTAGTACCCATGAGCCAAAACAAATTTGCATCTAATGTCATAGAGAGGTGTTTTGAACATGGGGGCAGTGCAGAGCGGGAACTTTTGGTCAAGGAGATTCTGAAGCAAACTGAGGGCAATAACTATTTGCTGGTATACATTATTACTGTAACTCACCTTTTGTTTTTTTTCCTTTGCCATTCCATGCTCTTTTGAGCCAAATAGCTAAAAGCTCTTGTTTGTTCAAAATTTGACTAATGTTAAACTCAATTAAAAGATATGGTAGGTACCTTCATGATCCAAATAATTGAGTAGGAGTTTTACTTAAATTGAAACATATAACAGAAGCCCGTCATTTTTTTTGGATAACAGAAGTAATCCTCATAAAATTCTGGCGCGGCTACTGTTTCTAAGGCTACTTGGTGCAATACAAATAACGGTGTTTCCAGCTATTTTTGTTTCGTTATTTGTGTTATTAGTCTAAATCTTTACTCAAGTAAGCGATTTACGAATTACCTGCACTGCTATACAGGTGATAATGAAGGACCAGTATGCTAATTATGTGGTACAGAAGATGCTTACAACATGCAATGAACAACATAAGGAGATCCTTCTCAGTCGTGTGAAAATCCATTTGCCATTATTGAAGAAATACACCTATGCCAAGCACATCGTCAGCCTAGTCGAGCGCCTCTGCGGTGACGGTGAGTCGTCCGCGTGCCACTCCTCCAGCCCTGCTAAATTTCTCCTCCTGATCCTCTACTTCAATTGGCCCCAAAATTTACTGCTCCCATATATGCCATTTTTCAGGAGCTGTGCAGTCCGAATCCAAAAAAACTGTAACCAAGGGCTGCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA029511