Os06g0229000

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Revision as of 09:11, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0229000| Description = Similar to FtsH protease (VAR2) (Zinc dependent protease)| Version = NM_001063747.1 GI:115467225 GeneID:4340563| Len...")
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Gene Name

Os06g0229000

Description

Similar to FtsH protease (VAR2) (Zinc dependent protease)

Version

NM_001063747.1 GI:115467225 GeneID:4340563

Length

694 bp

Definition

Oryza sativa Japonica Group Os06g0229000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:6700281..6700974

Sequence Coding Region

6700408..6700974

Expression

GEO Profiles:Os06g0229000

Genome Context

<gbrowseImage1> name=NC_008399:6700281..6700974 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:6700281..6700974 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gaggtgcagaaggtgacgctgatcccgcgggggcaggcgcgcgggctgacgtggttcctccccggcgaggaggacccggcgctggtgtcgaggcagcagatcttcgcggggatcgtgggcgggctgggcggccgcgccgccgaggaggtcgtcttcggcgagccggaggtgacgaccggcgcggcgggggacctgcagcaggtgacgcgggtggcgcggcggatggtgacggcgttcgggatgtcggagatcgggccgtgggcgctggcggagccggcggcgcagggcggcgacgtggtgctgcggatgctggcccggagctccatgtcggagaggctcgccgccgacatcgacgccgcggtgaggaccatcgtcgacgaggcgtacgaggtggccaaggcgcacgtgaggaggaaccgcgccgccatcgaccagctggtggacgtgctcatggagaaggagacgctcggcggcgacgagttcagggcgatcttgtcggagcacgtcgacatcggcaaggagcggcgggaaacggcggcgaggacacagcagctggccactgcttga</cdnaseq>

Protein Sequence

<aaseq>EVQKVTLIPRGQARGLTWFLPGEEDPALVSRQQIFAGIVGGLGG RAAEEVVFGEPEVTTGAAGDLQQVTRVARRMVTAFGMSEIGPWALAEPAAQGGDVVLR MLARSSMSERLAADIDAAVRTIVDEAYEVAKAHVRRNRAAIDQLVDVLMEKETLGGDE FRAILSEHVDIGKERRETAARTQQLATA</aaseq>

Gene Sequence

<dnaseqindica>1..567#gaggtgcagaaggtgacgctgatcccgcgggggcaggcgcgcgggctgacgtggttcctccccggcgaggaggacccggcgctggtgtcgaggcagcagatcttcgcggggatcgtgggcgggctgggcggccgcgccgccgaggaggtcgtcttcggcgagccggaggtgacgaccggcgcggcgggggacctgcagcaggtgacgcgggtggcgcggcggatggtgacggcgttcgggatgtcggagatcgggccgtgggcgctggcggagccggcggcgcagggcggcgacgtggtgctgcggatgctggcccggagctccatgtcggagaggctcgccgccgacatcgacgccgcggtgaggaccatcgtcgacgaggcgtacgaggtggccaaggcgcacgtgaggaggaaccgcgccgccatcgaccagctggtggacgtgctcatggagaaggagacgctcggcggcgacgagttcagggcgatcttgtcggagcacgtcgacatcggcaaggagcggcgggaaacggcggcgaggacacagcagctggccactgcttgagcagcagtagtggtagtacacagaagtgtagtgtgtagagatatttacatagagcaatgtaatgtactgtagtaacaaatgtaaggcagttgattgacaaacatatgaatgcatttagtttgttctc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0229000, RefSeq:Os06g0229000