BGIOSGA029525

From RiceWiki
Revision as of 17:18, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA029525

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA029525, complete gene.

LocusTag

OsI_31872

Ensembl Transcript ID

BGIOSGA029525-TA

Ensembl Protein ID

BGIOSGA029525-PA

Length

3646

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:17694102..17697747

Sequence Coding Region

17697594..17697747,17697329..17697403,17696145..17696314,17695857..17696042,17695211..17695376
,17694417..17694612,17694102..17694273

Genome Context

<gbrowseImage1> name=IndicaChromosome09:17694102..17697747 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:17694102..17697747 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGGGCAGCAGGAGCAACCGGAGATGGCGCCGCCTCCGCCGCGGCGGCGCGTCGTGTGCGTCACCGGCGCCGGCGGGTTCGTCGGCTCGTGGCTCGTCGAGCTCCTCCTCTCCCGCGGCTACGCCGTCCATGCCACGGTCCGTGACCCAGCTGCTGACTCTATTGCAGTCACGTTGGCTACTTACAGCCGTCAAATCAAGTTTGATGCCGAGATCAATCGCTACAACGATCCCAAGAACGCGTTTCTGAAGCAACTGGAGAATGCTCCGGAGAATCTGCAACTGTTCGAGGCCGACGTGCTCGACTGCGGCTCACTGACGGCGGCGTTCGCCGGCTGCGAGGGTGTCTTCCATCTGGCCACTCCGGTGCCGGAAGAAAAGATCGTTGATCCACAGAAGGAGATGATGGCTCCTACCGTGGAAGGCACCAGAAATGTACTCGAGGCTTGCTCAGCTGCGAGCGTTCAGAAACTCGTCGTGGCCTCCTCCATTGCTACTGTTTGCCTTAACCCGAGCTGGCCTCAAGATATGCCGAAAGATGAGACTTCCTGGTCAGACAAGAAGCTCTGCATTGAAAATGAGGATTGGTACTCTGTTGCCAAAATCGAAGCTGAAGAGATGGCCCTGGAATACGGAAAGAAAAATGGGCTTCATGTACTTACGATTTGTCCTGGAATTGTTTTTGGCCCAATGTTGCAGACAGTGGAAATCAACACAAGCAGCAAAGTGCTCCTCTATATGATTAAGGGAGGCGACGGCCCTCACGTTATGAACAACAAATTCTGGCCCATGGTAGATGTCCGTGATGTTGCTGATGCTTTACTTCTAGCATACCACAAGGCAGGGCCATCTGAGCGGTACTTATGCACTCTAGAACAGATGGACCTGAAACATTTATTGGATCTGATGAAGAACATGTACCCTAACTACAATTATGCAGACAAGATGGTTGATGTGGATTACAAGGTCGAAGTGACATCAGAGAAACTGAAGAATCTGGGCTGGAACCCAAGGAAACGGGAGGAGACACTTGCGGACAGCATCGAGTTCTTTGAGAAGGCAGGCCTTCTAGATGGGCGACCTTGCCGGCTTCCCTATTTCGCTGTCCAGGAATGA</cdnaseq>

Protein Sequence

<aaseq>MAGQQEQPEMAPPPPRRRVVCVTGAGGFVGSWLVELLLSRGYAVHATVRDPAADSIAVTLATYSRQIKFDAEINRYNDPKNAFLKQLENAPENLQLFEADVLDCGSLTAAFAGCEGVFHLATPVPEEKIVDPQKEMMAPTVEGTRNVLEACSAASVQKLVVASSIATVCLNPSWPQDMPKDETSWSDKKLCIENEDWYSVAKIEAEEMALEYGKKNGLHVLTICPGIVFGPMLQTVEINTSSKVLLYMIKGGDGPHVMNNKFWPMVDVRDVADALLLAYHKAGPSERYLCTLEQMDLKHLLDLMKNMYPNYNYADKMVDVDYKVEVTSEKLKNLGWNPRKREETLADSIEFFEKAGLLDGRPCRLPYFAVQE</aaseq>

Gene Sequence

<dnaseqindica>1..154#345..419#1434..1603#1706..1891#2372..2537#3136..3331#3475..3646#ATGGCGGGGCAGCAGGAGCAACCGGAGATGGCGCCGCCTCCGCCGCGGCGGCGCGTCGTGTGCGTCACCGGCGCCGGCGGGTTCGTCGGCTCGTGGCTCGTCGAGCTCCTCCTCTCCCGCGGCTACGCCGTCCATGCCACGGTCCGTGACCCAGGTATATGTATAAGCTGTTCATCTCTTGCTCATTTTAATCTTTGTACTGCATCTTTCTCGTCGGTTTCGGGGTTTCCTAGAGCGGTAACGGTGCAAAATGGAGAAAAAATGGACAAATTTTATCAAGTTATAATTTTTTAAGAAAAATTAGTTGATATGTCTGCCCCTGTTCTGCTGCTATACTGCTGCAGCTGCTGACTCTATTGCAGTCACGTTGGCTACTTACAGCCGTCAAATCAAGTTTGATGCCGAGATCAATCGCTACAGTAATTCCAATAAAGTAACTCGGTGATTTTTCGCTGTTTGCTAGTGTAGCAATGGCAAAACACTGTAGCACTACTCACAATTCACTGTTCCCCTCTGCCATTTACCCCCTGATGCGAACCCACCAAACAGACCCTCTGGTGGTTTCCATTACTGTACACAAACAGTAAACCCAATTACCGTGGGTAACCGACGGTAAGAAAACTCATCATCTATTGCAAAAGATCAAAGAGCAAAGGAGGTGTTTTTTGACGTCTTAATCATCTGCACAATATGGGTGGAATTTGGCTTCAAAGATGATCGAGTTTTCAATGGTGCATATGGTTCAGTGCAACAAGTAGTAAATTCCATCATCGCCATGTGCAAGCCTACCAGGAAGCAAAGTTTGGTTAGATGTCTTTACAACTGTCTGATACTGTTAGTTACTTTGCATTTTCTCAAATTCCTATGCCCCTCACCTCTTTTAGTGGCATCTCTTTGTGTCACCCTGTTGGTTTGTTGGAACTATGTATGTTGAAATTTTGTTTTCTCTTGTATAATTAAGATTAAATTTTACTTCAGGCCACCTTTTGTTACCGATGTTTCACTTTGGACCACCCTTTAAATAATATTTTCACTTTGAACTAGGTAAAATTGCCTTTTGTTTCACTTTGGACCACCCAACTCTCTTCTCAAGCATATGAACGATCTCGATTACGCTGTCTCCTACTCGTCAATGAACTGCCACAGCTATATGTAAGACTATTTCTTCGACATATTACAAGTTGGATGTAGATGGATAAAAGAGTGAAGGTGGTCCAATGTGAAATAAAGGTAAAAATACACGGACCAAAGTGAAAACATTGGTCCTAAGGTGGTCCAAAACGAAACATCGGTAATAAAAGATGGTCCAAATAAAATTAACTCTATAATTAAAATGGCAGAGCTGCCCGTTCCCTCAGAAAACAGAACTCATCTTTAGGTGCTCATTTTTCTTGTTCCCCTTTTGGATTGTGTTTCTCTTTTTCTTGTTTCAGACGATCCCAAGAACGCGTTTCTGAAGCAACTGGAGAATGCTCCGGAGAATCTGCAACTGTTCGAGGCCGACGTGCTCGACTGCGGCTCACTGACGGCGGCGTTCGCCGGCTGCGAGGGTGTCTTCCATCTGGCCACTCCGGTGCCGGAAGAAAAGATCGTTGATCCACAGGCAAGTAATCTATCTCAACAACCCAAAATCCTCTCGTGTTTTTGTCCCTCTGCAATCTGCATCTCTGCTTATCTTGTGTGCTAAACACGAGTATATATTCAGAAGGAGATGATGGCTCCTACCGTGGAAGGCACCAGAAATGTACTCGAGGCTTGCTCAGCTGCGAGCGTTCAGAAACTCGTCGTGGCCTCCTCCATTGCTACTGTTTGCCTTAACCCGAGCTGGCCTCAAGATATGCCGAAAGATGAGACTTCCTGGTCAGACAAGAAGCTCTGCATTGAAAATGAGGTTAGAAATCGCCAAATTAAGCACCAGGCATCCATGATCCATCCCAGAACAAATGTTAACACCAGTGATTGCAACTTCGGTTCGAAATTTTTGTAATTTTGGACCCCACCAGCAAATCTATGTATGAACCGAAATTTTTTTTCAGTGCTACCGAAATCACCCAAATCGAAAGTGTAAACCTGGTTAACACGTGAATGTGCCCCTGAAATTGTTTAGATGTATCTAATCCTTTTATCCATGTAGTACTAATTAGTTCTTCAGCTCTTTTTATTTTGTGAGAAGCATTAAATAATTAAGTACTCCATCCGTCTCACAATTTAAGTTATTCTAGCATTCCCCACATTCATATTGATATTCTAGGCATACATCAATATGAATGTGGGGAATGCTAGAATGACTTATATTGTGAAACGGAAGAAGTACTTCTTGCTTCTTTGGACTAATATACTACTCTTCACTTGGTGTGTTGGCACTTGGCAGGATTGGTACTCTGTTGCCAAAATCGAAGCTGAAGAGATGGCCCTGGAATACGGAAAGAAAAATGGGCTTCATGTACTTACGATTTGTCCTGGAATTGTTTTTGGCCCAATGTTGCAGACAGTGGAAATCAACACAAGCAGCAAAGTGCTCCTCTATATGATTAAGGGTTCACCATTTTAATTCTTTGTTCTTTACAGATGATTGGACATATTATGGTCAAATATGTAAAAAGGGGCGAATTAAACTTTTATATGTTGCAAACTAAAAAATAGCAGATACAGAAATTTTTAGAGAAATTGTAGTTTGAAAATTCATGGAACGCAAAATCCATAACTCCATAATCTCCATAGGACAGATTCTTATACATGATAGTTTCTATAGCATTCCCTCCCCGCTGCTAACTATTTCATCCGTTTTAAATTATTTATCGTTTTATCTTTATCATGAGTCAAACATTTTTAACTTTAATCATAATTTTTTAAAAATTTATATAGTTTAAAAATATCATAATATTTATGTATTTAGATTCACCATAAGAAATACTTTCATAATACATAATTTTATATGCTGAAAACTATATAAACTTCTAAAGAAAATAATCGTCAAAGTTAAAAATATTTGACTTTGGACATAGCTAAAACGACAAATAATTTAAACGGGGAAGCACCAAGGATCTAAGAGCAAGTATAAATACTTCAACCTTCCAAGTTGATTTTAAATCTTGGACTTTGGTTTTAAGATTAATTAGTTTGATTGGAATGCAGGAGGCGACGGCCCTCACGTTATGAACAACAAATTCTGGCCCATGGTAGATGTCCGTGATGTTGCTGATGCTTTACTTCTAGCATACCACAAGGCAGGGCCATCTGAGCGGTACTTATGCACTCTAGAACAGATGGACCTGAAACATTTATTGGATCTGATGAAGAACATGTACCCTAACTACAATTATGCAGACAAGTAAGTGAAATCTCCTTATCATTGTGATCAGCATCATCCTATATATAATACCAGAGTTAGTCTCAACTCTCAAGGGTGTTTTGTGCAATTGTGCTCACGACATGAACAAGATTAGTTTGAGCAGCAGCTTTGTTGTTTGACAGGATGGTTGATGTGGATTACAAGGTCGAAGTGACATCAGAGAAACTGAAGAATCTGGGCTGGAACCCAAGGAAACGGGAGGAGACACTTGCGGACAGCATCGAGTTCTTTGAGAAGGCAGGCCTTCTAGATGGGCGACCTTGCCGGCTTCCCTATTTCGCTGTCCAGGAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA029525