Os06g0229200

From RiceWiki
Revision as of 09:11, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0229200| Description = Glycosyl transferase, family 31 protein| Version = NM_001063748.1 GI:115467227 GeneID:4340564| Length = 5707 bp| De...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os06g0229200

Description

Glycosyl transferase, family 31 protein

Version

NM_001063748.1 GI:115467227 GeneID:4340564

Length

5707 bp

Definition

Oryza sativa Japonica Group Os06g0229200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:6715195..6720901

Sequence Coding Region

6717067..6717835,6718173..6718408,6718607..6718888,6719295..6719423,6719500..6719679
,6719903..6720010,6720195..6720404

Expression

GEO Profiles:Os06g0229200

Genome Context

<gbrowseImage1> name=NC_008399:6715195..6720901 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:6715195..6720901 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaagaaatggcacggtggttttgtcatagtatctttgttcattatattgatgctaagatatgttatattggatagtccacttgctgaaaaatctcttcagtatgtcttccaacagaataacacaaccccactacattggctggatgttccaaacccgcctgcagttcagaatccacagaacatctctcaagtaatatcaactgaattgttagcttcaaacctttccataacaagaaatttctccgatagagaactgcagtcattgcattcttggaatcatttaaaagacctagtaagtcatgcgcacatcttaccagatggagtagaagcaatcaaggaagctggagtagcatggagggagctaaatgcagcccttgaatacgatgaatctgctgtttctgtcaatggtagcactcatcaaaaaagtaaagagaagcaatgcccatattccattcgaagaatgaatgctacaagatcaggtgatagatttgtcttaaagattccttgtggactgattcagggctcttcaataactattatcggtactcctggtggtcttcttggtagttttaagatagaattaactggggctactgtacctggtgaaccagaccctccaattgtgcttcattacaatgtccgtcttcttggtgataaacttacagaagatcctgtaatagtccaaaatacatggactatagctgacgactggggttctgaagatcgttgcccatctcctggttcagatgctaaggacattgcaaaagtggatgagttagaaaaatgcggtagcatggtgggcaatgatcaaaaacaagcatgggccactaagttaaagtccaatgtttcaagcatacaacctgcctggaaaaagaacacagaacctaagaaatattttcccttcagacaaggatatcttgctatagcaattcttcgtgttggagcacatgggatccatatgactgtagatgggaaacatgtcacttcatttgcctttcgggaggatttggagcctggatttgttggtgaagtaagaattgcaggagatattaaattgttgtctgtgatagcaagtggtttgcctacaacagaggactttgaacatgtgactgacttagaaattttgaaggctccaccagttcccatggacaaacccctggatctttttattgggatcttttctacagctaacaatttcaagcgcagaatggcagttcgcagaacttggatgcagtatgatgctgtccgctcaggaaaggctgcagttcgattctttgttggcctgcataaaaatgaggtggtgaatgaggaactttggaatgaagcacgaacatatggagacatccaattgatgccctttgttgattattatagcctgattctatggaagactatagccatctgcatctatgggacaaacgtcttgtcagccaagtatgtgatgaaaacagatgatgatgcttttgtccgtgtggatgagatacttttatctttagatcgcgtgaacatcagtcatgggttactgtacggtcgtgtcaattctgattctcagcctcatcgagacccatatagcaagtggtacataaccccagaggaatggcctgaggagagttatcctccatgggcacatggtccgggatacattgtatcacaagacatagcaaaagaagtttacaggaaacacaagagaggagaacttaagatgttcaaactagaagatgtcgcaatgggaatatggatcaatgagatgaagaaggatgggttggatgtaaagtatgaaaatgatgggaggattttggtcgaaggctgtgaggaaggatatgtggttgcacattaccaggagccaagggacatgatgtgcctatgggacaaatttctgaaaacaaaacgaggaacatgttgcaaggagtaa</cdnaseq>

Protein Sequence

<aaseq>MKKWHGGFVIVSLFIILMLRYVILDSPLAEKSLQYVFQQNNTTP LHWLDVPNPPAVQNPQNISQVISTELLASNLSITRNFSDRELQSLHSWNHLKDLVSHA HILPDGVEAIKEAGVAWRELNAALEYDESAVSVNGSTHQKSKEKQCPYSIRRMNATRS GDRFVLKIPCGLIQGSSITIIGTPGGLLGSFKIELTGATVPGEPDPPIVLHYNVRLLG DKLTEDPVIVQNTWTIADDWGSEDRCPSPGSDAKDIAKVDELEKCGSMVGNDQKQAWA TKLKSNVSSIQPAWKKNTEPKKYFPFRQGYLAIAILRVGAHGIHMTVDGKHVTSFAFR EDLEPGFVGEVRIAGDIKLLSVIASGLPTTEDFEHVTDLEILKAPPVPMDKPLDLFIG IFSTANNFKRRMAVRRTWMQYDAVRSGKAAVRFFVGLHKNEVVNEELWNEARTYGDIQ LMPFVDYYSLILWKTIAICIYGTNVLSAKYVMKTDDDAFVRVDEILLSLDRVNISHGL LYGRVNSDSQPHRDPYSKWYITPEEWPEESYPPWAHGPGYIVSQDIAKEVYRKHKRGE LKMFKLEDVAMGIWINEMKKDGLDVKYENDGRILVEGCEEGYVVAHYQEPRDMMCLWD KFLKTKRGTCCKE</aaseq>

Gene Sequence

<dnaseqindica>1873..2641#2979..3214#3413..3694#4101..4229#4306..4485#4709..4816#5001..5210#cagttcagtcaccaacccaccaaaccccaccgcgaccgcgactccgacgtctccgccacgggccaaagtcgaaaaatcgaggggactttcccatctccatcccgcggcgggcgcacgggttggtcggttggtccgtccgtggcgtggactcgaagccgcctcgtcttcctcctcctcctcctcccccctccggcagtggcccaggagggcgcccgcggctactgctgcttccgctcaaagcttcaagttcccgtgcgcttctgcttccccactacctcccgctggtctcggtgcccactgcgcagcgcggtgcttcatctccctctcgctccggggctggctgcagccacaagctagcggcagcggaggactcgcttccgacgagctcggtgtggtgtggaggtggtgtctggcttggctggttggtttgctggtgagtggctcgggcattgaggctatttctctgttcgaattgcattgcggaggtgggggagcggggatggtggccggctcggttctcgaatcggctgccgcctgggttgacaagattttggagcggaatttgggggcggttgctttttgcttgtaagattgctggtgtttcttcgtcgtccctgatctcgcttgtgtggtttcccgctccagattcgttggaggatgggggggtttcggtgcggtgatctgcgcattgatgtggagttagtggatgagtggcgtcattttccgccatctcaaaagagggttgtcggtgggagttcgtgtgatgccgtgatggggcgttgacgctagattcgcggctccaatttcgtgaaactttcgcggaattcgagttttttttcgtatttagctgtgtttttctttcctttattttttctaaacctttttcgtgatctctctagcgttgtggctggatttaccgttgcttaattctgaccgcgtgattagtggatggaactgtttcctccacttgggaagaccttgcaattggagctcggctcctttacggtttcctgatgatttccccggataacagtgatgtaattatgttgtcttcttcttttgctatactcttttgctgtgatttcgccctcactttctctatttcaagaaattagcttcgctgattggtgcactgctaaactcggttttcccttttagataaggaaatggtttatatctccagcctctgccatgctaaacttggtttactcgtttacttgctaggttgatttgacaatagttacttggttcggtaggagcttctaatttctgaatatggggcattgaattggacacacatatgccacatcatagcaattccaaggcatgatgcggttttggtgcttgttatcttgtagtaataccaagagagttcctgtggttggaagagtctgtagccaacgattctgtttgtgtatcatttaggactggctatgatataagcacgacttgtagaatagcaccatggatgtgtataaacattacctttaccttgtagtagagtgtaccatgtgcaccattaatgcaatcaacatcaaacatttcattcgctaattaccattaatgggcatgcttcttcttgtttgacaggacgtaaagcacattcctatttgggttgcgttgcttctttaggtcagaggacactccaaactgccgcaaagtttcactgatacagctctttgtcttcataaagggattatcatacaccttaacactttaatagatcaggatgacagttgagctggaattgatttaacttgcttgcttggatggtttgtgttctgaatttggaatttcatggttatggatactttaggatgaacacatattgattttagacatcagaccaacttgctaaaacagttctgagtgatgaagaaatggcacggtggttttgtcatagtatctttgttcattatattgatgctaagatatgttatattggatagtccacttgctgaaaaatctcttcagtatgtcttccaacagaataacacaaccccactacattggctggatgttccaaacccgcctgcagttcagaatccacagaacatctctcaagtaatatcaactgaattgttagcttcaaacctttccataacaagaaatttctccgatagagaactgcagtcattgcattcttggaatcatttaaaagacctagtaagtcatgcgcacatcttaccagatggagtagaagcaatcaaggaagctggagtagcatggagggagctaaatgcagcccttgaatacgatgaatctgctgtttctgtcaatggtagcactcatcaaaaaagtaaagagaagcaatgcccatattccattcgaagaatgaatgctacaagatcaggtgatagatttgtcttaaagattccttgtggactgattcagggctcttcaataactattatcggtactcctggtggtcttcttggtagttttaagatagaattaactggggctactgtacctggtgaaccagaccctccaattgtgcttcattacaatgtccgtcttcttggtgataaacttacagaagatcctgtaatagtccaaaatacatggactatagctgacgactggggttctgaagatcgttgcccatctcctggttcagatgctaaggacattgcaaaaggtacatttgtttcagttgcctgtctcttcctatggacatgatatccatcgattgtatcatatgatcttgccctacaattggatacataaaataccttgataaagtaccgtacctagtttttatgattgcctacatggtaaaaagtatgccctcttcatgtattgtacctgcaaacattatttgtgtgaagcttttgatattgctatataattctatttttcatcacttttagcccttaagatttgttcaaaaaaatcgattggtgtcttggcaaatagttcattcgcctcttgatcttgagcttgacatagatacatcgtgttctattgttttacagtggatgagttagaaaaatgcggtagcatggtgggcaatgatcaaaaacaagcatgggccactaagttaaagtccaatgtttcaagcatacaacctgcctggaaaaagaacacagaacctaagaaatattttcccttcagacaaggatatcttgctatagcaattcttcgtgttggagcacatgggatccatatgactgtagatgggaaacatgtcacttcatttgcctttcgggaggtgagtcttttttaggcaatctagtatgttttatatcttgaaatattttgtaggcatttttttctgagtgtgcaaaaatatttgttcttccatagttcatacacacaaagaattgaaactcattttattctcctcagctctcttatgtcaaaatatgtttggattgctatttttcttactaatgtattcttttaccaggatttggagcctggatttgttggtgaagtaagaattgcaggagatattaaattgttgtctgtgatagcaagtggtttgcctacaacagaggactttgaacatgtgactgacttagaaattttgaaggctccaccagttcccatggacaaacccctggatctttttattgggatcttttctacagctaacaatttcaagcgcagaatggcagttcgcagaacttggatgcagtatgatgctgtccgctcaggaaaggctgcagttcgattctttgttggcctggtaagcatgaaactatgacagaatagcatattatagggtgattcactggtttatacctgaaagcattggctgattttaactttctatggttatatgcctagaggctgatgtgttggaatataattaccacctataacctattttagcatatcatgccctgtgttgattgtactccccacatgtaaatatttagttgctcgttaatttcactctaaatttgtgtattgctacctatcagtagaatgtaccgatgtatcatgactattgtctcgaacaatactgtaaaaaaaattcatttttactcttattgttccctttttttgccggcaccagttgtgctagtttgaattagggtacccttcttcagagttaacacatctaccccttttcctgccattgttaaaagcataaaaatgaggtggtgaatgaggaactttggaatgaagcacgaacatatggagacatccaattgatgccctttgttgattattatagcctgattctatggaagactatagccatctgcatctatggggtatgtagttactttttttttgtatgtattttttgaaatattttgcatctaattcagcttaaatttttcctcttagacaaacgtcttgtcagccaagtatgtgatgaaaacagatgatgatgcttttgtccgtgtggatgagatacttttatctttagatcgcgtgaacatcagtcatgggttactgtacggtcgtgtcaattctgattctcagcctcatcgagacccatatagcaagtggtacataaccccagaggtagttgatttaatcctaatttgacatttaagttattgtgtgcaccatcattttgaaacatgtagaaatcttctgtttgaccattgtatattgctaatattatgacatagtagatgcctaggaactgatttgttagtaattgggcacattcaacaggcttagcgataaatcctttaccatttttattttgcgatgaaataactctactactctacttatataggaatggcctgaggagagttatcctccatgggcacatggtccgggatacattgtatcacaagacatagcaaaagaagtttacaggaaacacaagagaggagaacttaaggtaataccagatttccctaaaatttcttctcactgctgatatgcagcagttgcacgcagttactgtggtttccgctaatggcacagccataatggaatattctaagcttactagtgctggtttctgtttatatgctcttggcatcctcaaatttgattcctactatccggacgttgtattgcagatgttcaaactagaagatgtcgcaatgggaatatggatcaatgagatgaagaaggatgggttggatgtaaagtatgaaaatgatgggaggattttggtcgaaggctgtgaggaaggatatgtggttgcacattaccaggagccaagggacatgatgtgcctatgggacaaatttctgaaaacaaaacgaggaacatgttgcaaggagtaacgggggagtaacaggactaatccgaccatatattttgatggctactgtatagccatggcctgctgacaccaacgacaagctcggcacaacgccacaaccccatgcaagaggagcaggcaacaaagttttaaccttgcttatttttggtggttgcagaatcaataggcaacgaagttttgaatatcattcacagtcatttttgtccgcggggaaagagattgaagtctcaccaccatattttgtagaagatgtaggtttcctatttgggcatataggtagggaggtgttgcttagttgcttgcagtgtggcttcttgtaacatatctttctagaaaaacgtaggatacaccggcaattacacttttagggtagatgcagaggcagtattaccattcttttcctaggaatgcatcctgtatctgatgtaaagctatttgacaactactcattgtacaatccacttcctatccacggcatacctgaactttttctttgtc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0229200, RefSeq:Os06g0229200