Os06g0231400

From RiceWiki
Revision as of 09:11, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0231400| Description = Protein prenyltransferase domain containing protein| Version = NM_001063757.1 GI:115467245 GeneID:4340573| Length = ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os06g0231400

Description

Protein prenyltransferase domain containing protein

Version

NM_001063757.1 GI:115467245 GeneID:4340573

Length

1871 bp

Definition

Oryza sativa Japonica Group Os06g0231400, complete gene.

Source

Oryza sativa Japonica Group 

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:6795599..6797469

Sequence Coding Region

6795633..6797441

Expression

GEO Profiles:Os06g0231400

Genome Context

<gbrowseImage1> name=NC_008399:6795599..6797469 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:6795599..6797469 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcggccaccaccaccgcgccgtccccgaccccgatccccatcaccaccatcgccgagctgaggcagcaccactcccagctcgtccgcctcggcctcgcctcccacccgccccacgcgcgccgcctcctcgccttcctcgcccgcgaccccgcccacctcccctacgccgcgcgcctcctcgcccaccacccggacccccgccccgccctcctcaacccgctcttcgcctccctcccgccgcgcgccgccgcgtcgctcctcgccctcatgctctccctcccgctcctccccgaccacttcaccttcccccgcctcctccccgccgcgccgctcccgctcgccgcccagctccacgcgctcctcctcaagctcaacctccactcccacgcccactcgctcaacgcgctcctcgccgcctacctcgccgccgcgcgccccgacctcgcccgcgtgctcttccgcaccagcggcggcggcgcgctcgacgtcgtgtcgtggacgacaatggtgggcgggctgtgcaggctcggcctcgtggacgatgcgcgggaggtgttcgatgcgatgcccgcgaggaacctggtctcctggaactccatgatctcgggctacgtcaaggccgaccggttcttggatgcgttggaggtgttcgacgaaatgcgggcgctgggagtggaggggaacgggtttgtggcgacgagcgcgctggtggcttgcacgggcgcgggcgcgctgggtcgcggtagggagatatacaggtgggtggagcagagcgggatcgaggtggacgccaagctggcgacggcggtggtcgacatgtactgcaagtgcgggtgcgtcgacgaggcatggggcgtgttcgactcgctgccggcgagggggctcacgacgtggaactgcatgatcggcgggttcgcggtgcacgggaggtgcgacgacgcgctcgagctattccaccaaatggaggccgcaggcgtggcgcccgacgacgtcacgctgctgaacgtgctcacggcgtgcgcgcacgccggcgaggtcagcgaaggccgccgctacctcaaccacatcgtgtctcgccacggcatcgagcccaagggagagcactacggctgcatggtcgacctgttcgggagagcaggccagctagacgaagccaagaaggtgatcgacgaaatgccaatggatcccgacctcgccgtcctcggcgcgctcctcggcgcatgcaagatccacggcgacgtcgacctcggcgaggcgatcgggtggcgcgtcatagacctcgacccggacaacagcggccgctacgtgctcctcgcaaacctgctcgccggcgccggccggtgggacgaggtgggcaaggtccggcggctgatggacgagcggaacgtgagcaaggaggccgggcggtcggtgatcgaggtcgacggcgaggcctgcgagttccggtgcgggaacctgcgccacccacaggctcgggagatctacgccatggccgtggacatggtgagcaggatccgggccgaggggtacgtgccggacaccggcgaggcgctgcacgacgtcgccgaggaagacaaggaggcggcgctgctgtgccacagcgagaagctcgcgatcgccttcgggctgctgcgcgcgaggccgcgcgagacgctgcgaatcaccaagaacttgagagtttgtagggattgccacgaggcgaccaagtacgtgtctcgcgtgtttgggcgtgagatcgtggttagggacaggagccggttccatcatttcaaggatggcatgtgttcgtgtaaagattactggtaa</cdnaseq>

Protein Sequence

<aaseq>MSATTTAPSPTPIPITTIAELRQHHSQLVRLGLASHPPHARRLL AFLARDPAHLPYAARLLAHHPDPRPALLNPLFASLPPRAAASLLALMLSLPLLPDHFT FPRLLPAAPLPLAAQLHALLLKLNLHSHAHSLNALLAAYLAAARPDLARVLFRTSGGG ALDVVSWTTMVGGLCRLGLVDDAREVFDAMPARNLVSWNSMISGYVKADRFLDALEVF DEMRALGVEGNGFVATSALVACTGAGALGRGREIYRWVEQSGIEVDAKLATAVVDMYC KCGCVDEAWGVFDSLPARGLTTWNCMIGGFAVHGRCDDALELFHQMEAAGVAPDDVTL LNVLTACAHAGEVSEGRRYLNHIVSRHGIEPKGEHYGCMVDLFGRAGQLDEAKKVIDE MPMDPDLAVLGALLGACKIHGDVDLGEAIGWRVIDLDPDNSGRYVLLANLLAGAGRWD EVGKVRRLMDERNVSKEAGRSVIEVDGEACEFRCGNLRHPQAREIYAMAVDMVSRIRA EGYVPDTGEALHDVAEEDKEAALLCHSEKLAIAFGLLRARPRETLRITKNLRVCRDCH EATKYVSRVFGREIVVRDRSRFHHFKDGMCSCKDYW</aaseq>

Gene Sequence

<dnaseqindica>29..1837#atcttctccaagctctcgtcctccaccaatgtcggccaccaccaccgcgccgtccccgaccccgatccccatcaccaccatcgccgagctgaggcagcaccactcccagctcgtccgcctcggcctcgcctcccacccgccccacgcgcgccgcctcctcgccttcctcgcccgcgaccccgcccacctcccctacgccgcgcgcctcctcgcccaccacccggacccccgccccgccctcctcaacccgctcttcgcctccctcccgccgcgcgccgccgcgtcgctcctcgccctcatgctctccctcccgctcctccccgaccacttcaccttcccccgcctcctccccgccgcgccgctcccgctcgccgcccagctccacgcgctcctcctcaagctcaacctccactcccacgcccactcgctcaacgcgctcctcgccgcctacctcgccgccgcgcgccccgacctcgcccgcgtgctcttccgcaccagcggcggcggcgcgctcgacgtcgtgtcgtggacgacaatggtgggcgggctgtgcaggctcggcctcgtggacgatgcgcgggaggtgttcgatgcgatgcccgcgaggaacctggtctcctggaactccatgatctcgggctacgtcaaggccgaccggttcttggatgcgttggaggtgttcgacgaaatgcgggcgctgggagtggaggggaacgggtttgtggcgacgagcgcgctggtggcttgcacgggcgcgggcgcgctgggtcgcggtagggagatatacaggtgggtggagcagagcgggatcgaggtggacgccaagctggcgacggcggtggtcgacatgtactgcaagtgcgggtgcgtcgacgaggcatggggcgtgttcgactcgctgccggcgagggggctcacgacgtggaactgcatgatcggcgggttcgcggtgcacgggaggtgcgacgacgcgctcgagctattccaccaaatggaggccgcaggcgtggcgcccgacgacgtcacgctgctgaacgtgctcacggcgtgcgcgcacgccggcgaggtcagcgaaggccgccgctacctcaaccacatcgtgtctcgccacggcatcgagcccaagggagagcactacggctgcatggtcgacctgttcgggagagcaggccagctagacgaagccaagaaggtgatcgacgaaatgccaatggatcccgacctcgccgtcctcggcgcgctcctcggcgcatgcaagatccacggcgacgtcgacctcggcgaggcgatcgggtggcgcgtcatagacctcgacccggacaacagcggccgctacgtgctcctcgcaaacctgctcgccggcgccggccggtgggacgaggtgggcaaggtccggcggctgatggacgagcggaacgtgagcaaggaggccgggcggtcggtgatcgaggtcgacggcgaggcctgcgagttccggtgcgggaacctgcgccacccacaggctcgggagatctacgccatggccgtggacatggtgagcaggatccgggccgaggggtacgtgccggacaccggcgaggcgctgcacgacgtcgccgaggaagacaaggaggcggcgctgctgtgccacagcgagaagctcgcgatcgccttcgggctgctgcgcgcgaggccgcgcgagacgctgcgaatcaccaagaacttgagagtttgtagggattgccacgaggcgaccaagtacgtgtctcgcgtgtttgggcgtgagatcgtggttagggacaggagccggttccatcatttcaaggatggcatgtgttcgtgtaaagattactggtaagaaaaatagacgtgatgatgcagagaaattcttt</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0231400, RefSeq:Os06g0231400

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os06g0231400&oldid=11317"