Os06g0233400

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Revision as of 09:11, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0233400| Description = Protein of unknown function DUF298 family protein| Version = NM_001063767.1 GI:115467265 GeneID:4340586| Length = 38...")
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Gene Name

Os06g0233400

Description

Protein of unknown function DUF298 family protein

Version

NM_001063767.1 GI:115467265 GeneID:4340586

Length

3893 bp

Definition

Oryza sativa Japonica Group Os06g0233400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:6927599..6931491

Sequence Coding Region

6927856..6927966,6928235..6928294,6928405..6928506,6928648..6928697,6928870..6928934
,6929033..6929115,6929301..6929324,6929982..6930040,6930225..6930358
,6931007..6931068,6931326..6931328

Expression

GEO Profiles:Os06g0233400

Genome Context

<gbrowseImage1> name=NC_008399:6927599..6931491 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:6927599..6931491 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcataagctggggagaggaagccgcgacaaggtgcagcagttcatgaccataactggtgcgagtgagaaggtcgcccttcaggccctgaaagctagtgattggcacttggaaggagcttttgattttttctacagccaaccacaaatttctctgacgaactctcggcatcttgaagatctgtacaacagatacaaagaacctgatgttgatatgatcatggtggaaggtgtatctcagttttgcactgatcttcaggtggatccccaggatattgttatgcttgtcatatcatggcacatgaaagctgccacaatgtgtgaatttactcgccaggaattcattggtggactgcagtcaattggggtggattcaattgaaaagctccgtgagaaattgccatctttacgggctgagataaaagatgaccataaattccgtgagatatacaactttgcttttgcttgggctagggaaaagggtcaaaaatctctcgcactggagactgctcttggaatgtggcagttgctctttgctgaaaggcactggccccttatcgaccattggtgccagtttttacaggtgaggcataataaagccatttctagggacacatggtctcaactgttggaatttgtcaagacgatcgatccacagttatccaactacgacgaagaaggtgcttggccctacctaatagatgaatttgtggagtacctaaccgagaatggattcgttcagcttaggaagtga</cdnaseq>

Protein Sequence

<aaseq>MHKLGRGSRDKVQQFMTITGASEKVALQALKASDWHLEGAFDFF YSQPQISLTNSRHLEDLYNRYKEPDVDMIMVEGVSQFCTDLQVDPQDIVMLVISWHMK AATMCEFTRQEFIGGLQSIGVDSIEKLREKLPSLRAEIKDDHKFREIYNFAFAWAREK GQKSLALETALGMWQLLFAERHWPLIDHWCQFLQVRHNKAISRDTWSQLLEFVKTIDP QLSNYDEEGAWPYLIDEFVEYLTENGFVQLRK</aaseq>

Gene Sequence

<dnaseqindica>3526..3636#3198..3257#2986..3087#2795..2844#2558..2622#2377..2459#2168..2191#1452..1510#1134..1267#424..485#164..166#aaaaaagaaagcgaggggtagcaaagccagccaggcgagggaggaaggaaggaagaagagcaggaggagcccaacgcccgcgaaaccctagccctcgcgctcgcccaccgccttcctctccccccctaccctaccccgagctcgccacccgatccgatcgaagatggttagtacctcacctcgccccccgtctcgattccgcgtctcttcgcgattcgtttcgacccatttgtgattttttttctgggggttgtgtgtgtttgaaatcggtgtgcgtgcgataatttgagcctttgctgttctgtccattgttcgattcgtcggtttggcgatgcaattttgggtgagagctgcgggattttgtttgatccggttctttttgagaaacttctttttgaaggttggttgtttttgtgtttgcagcataagctggggagaggaagccgcgacaaggtgcagcagttcatgaccataactggtgcgaggtgggtgggatcatttatttgctccccaactttagacctgcggtgttaataggactggaaatcggtggtgatttgttagttcgattcattgtacggcctgcggtattcttaggattggaaatcggtggtgatttgttagttcaattcattgtacggccatcttaggttgtcactgttgatgtcaaactatctctgagcttctgaaaatatcggattagaatgtgtttgttgcagccaagttactgttaactggttgttttggccttaggctgaaattagttgccctagttagcggtgatggatctggggaaaaaaatgacaccaccattcgtgtgatagcttatgagcttagctacagggtgttcaccgccacatgtattagttagaataaggtaaagtgaaattgcaagttgttatgctcatcatgccactattttagtctacaaaataaatggtgcctccagtaatgtaaaacaccacttgcgaatatgttagtgaattctagagtatagtatttttcagttatgctgcttgtttgctttgttgttgacaaaccggcaaggtagtaaaatcacaataattttagcaagccttttcgctgttatttgaaaccagtaactcattaagtacatttgttaacttatgcagtgagaaggtcgcccttcaggccctgaaagctagtgattggcacttggaaggagcttttgattttttctacagccaaccacaaatttctctgacgaactctcggcatcttgaagatctgtacaacagatacaaaggtattgatcttcattgccttaactagctattgtgtttaaattccataaatttctttacatgtattgtttcatatgtgccgtcagcaaacctttttttcttcttagctttatggaaacatatgtttttcttctcctgttgcaatgctttagcctatgattcaaggtggtataatttctttttcagaacctgatgttgatatgatcatggtggaaggtgtatctcagttttgcactgatcttcaggtaagaaacagctatttatcttcccgatctcatttcgtattttcttgtttgatttccatatgcaggcatgtctaggcgatacttagtcaatgagttgctatgtacaactcttatattggaatggctctcatttgttaatagctgcagctttttttgggtaccaactatatctcactggcgaggaagagatggattttatttcactgtgtttttctacgtttgatgttcaggcggtttttaataagttattaccagatttagcttgcctgtgggctaatcaaactgtggtagtctctgacaaataaacattgctccagaatttgcaactaccatttaccatgtatgcatgtgagcatctgcatcctgtgaggaattaggcaatttattgcacttctttttgggtcgagcttttcctctttgtgggaggtgtttttctctctcttttccttgtatatacctttgttttattcttaacaaaatgaaacacagctatcctgcgattttgagaaaaaaatagtgtttttttaacttgcgaaatattattttgttaagggatatgtgttccaatgtatgtattttgttattatattatatcatggatccatcatattaagtcattatcagtttataagatgtatgctttgttttgattttcaggtggatccccaggatattgttatggtatgcattttagcttcttctgggctaactgtcacttccattttcgtttgtaacctagctctacgctttatttggatttatagttctatttgagatttgatatattccaaagaaacccacagcttcagagatctgttattctatttatttaaattaacacgaccactgatttttgttgttaacagcttgtcatatcatggcacatgaaagctgccacaatgtgtgaatttactcgccaggaattcattggtggactgcagtcaattgggtgagtgccattttcaatcatggtgtctatgtaattgatcaaactattgagtgtttcttagatatagttttttcatatatcccgggtggtatttgcagggtggattcaattgaaaagctccgtgagaaattgccatctttacgggctgagataaaagatgaccgtatgtgttttctttgtgtgaagttggattttctctatgttgaagtaacactacattttagtttacaatttgtgaccaatatgaaggaactgaaatagaatgtgtatggaaggaattcaatgccatcttttatttgatatctaatctgtgtggttactctttcctcactcagataaattccgtgagatatacaactttgcttttgcttgggctagggaaaaggttagcctcagttgaagaatatttgtttcagaacccttgtctttatttgcagcaggacaacattttttgttcataaacatcatcctgtgatcctgatgttccctatgtttattttcctgaaatatgctcttgatcttacagggtcaaaaatctctcgcactggagactgctcttggaatgtggcagttgctctttgctgaaaggcactggccccttatcgaccattggtgccagtttttacaggtatgcctcaaaggtggttccatgtacttccattttcagagcatcttgctatttcaaaaacttagtggtttcagatgatactttgctaatttaaatccttcaaatttcaggtgaggcataataaagccatttctagggacacatggtctcaactgttggaatttgtcaaggtaccactgttaatccctcctttctttctgggtaaatatgcaaggaagcaagtcttgtttgtgtcagatggttgactatgaatcagtgacagacaaactcttttaggtgaatcacagaatgagacatgttatctggttcgcttagattgtcattgttaggtacctaggtagttttgtgatctgcctcctttgatcttttgataatttctgcatcaaaggtctattgatgcccctttgtgaatactaaatatgtgttctgttatcgcagacgatcgatccacagttatccaactacgacgaagaaggtgcttggccctacctaatagatgaatttgtggagtacctaaccgagaatggattcgttcagcttaggaagtgaacaatgggaggcccacattctcactacttcaaatacaatcatgattgggctgtacaaacgtgtgagattcatctcggtctatacagtgttcagggcttggccttggcgttcttgcgcaactgatcgcaaacagtggacatgtatccttacgtgatgacatttgctcgcgcaaggggacgatttgatttgggaagtggtgactgccattgtggaattatcacttacggtttatttaatatatattgtggtcggcgcag</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0233400, RefSeq:Os06g0233400