Os06g0238700

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Revision as of 09:12, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0238700| Description = WD40-like domain containing protein| Version = NM_001063791.2 GI:297605481 GeneID:4340613| Length = 2757 bp| Defini...")
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Gene Name

Os06g0238700

Description

WD40-like domain containing protein

Version

NM_001063791.2 GI:297605481 GeneID:4340613

Length

2757 bp

Definition

Oryza sativa Japonica Group Os06g0238700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:7208517..7211273

Sequence Coding Region

7208517..7208692,7209392..7209511,7210082..7211273

Expression

GEO Profiles:Os06g0238700

Genome Context

<gbrowseImage1> name=NC_008399:7208517..7211273 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:7208517..7211273 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagtccgaactctgaagaaggtatcatctcccaaacaatctcaagctcaagctcaagctcatgccactaccagtgcattgccacgctcagtggcaactcctcctacgtctccggcctcgccgtcgacggcgactcgctctacgtcgcctcgtcggacggccacatcaggctgtggccgctggacatggccatggccatggtgcgagaggagtcgacgtcgtcgtcgtcgcagggcgaggtgtccagatccaccgtcgccgtcaccggtagcccggtgaagtgcctcgccgccaccggcgatgggcttgtcagctcgcaccaggacggcacgataagggtgtggcggcacgccggcggccgccgccgcctcgcgctgcgcgccgtgctgccgacggcggcggactgcctccgcgcgctcctgctcccgggcggcggctacgtcgaggtgcggcggcacaagaggcgggcgtgggtgcaccacgtcgacgcggtcaccgcgctcgcgctgtccccggacggcgagagcatgtactccgtgtcgtgggaccggagcctcaaggcgtggcgtctgcccggactccggtgcgcggagtccgtggcggcggcgcacgacgacgccatcaacgccgtcgtcgccgcgcccgacgggcacgtgtacacggcgtcggcggacgggacggtcaaggcgtggaggcgccgcacggggcagaagaagctctcgctggtctgcgtcatggagcgccacggcgccgcggtgaacgcgctggcgctcggcggcggcgggcgggtgctctactccggcgcgtgcgaccggtccgtcgtcgcgtgggagaactccgccggcgccggcgccggtggcgcggacgtgcgcatggtggctaccgccacgctcaggggccacgcgagggcggtgctgtgcctcgccgccgacggcgacgtggtgtgcagcgggtcggcggacaggacggtgagggtgtggaggcggggagcgacggcggcgtacacctgcttggccgtgctcgacggccatggcggcgccgtgaagagcttggcattggcgaggggaggagcaggatgcgatcgctgctgcgcgtgccacgtggaggagagctcgagctgcagctgcgctgctctcgtttgcagtggctcgttggactgtgacgtcaagctttggagagtgacggtttccgaagctattaaaggctcaaaggtgcaccatgttggaaggttgctgggccttattttccacttgtttgtatggctttcaaactttgttgagttcaagggtgcggggtacatctacataaaaggtatcaggtctactggtctatggtatcagtccaaacaatctaggtaccaagaagtcgatacccaggcgttaggtacctatgggtatcaggccttcgcgctaatgagagcaacaaggagaagggaaatgagacagggcaagcacagagatgagatggctacccttcttacaaactga</cdnaseq>

Protein Sequence

<aaseq>MSPNSEEGIISQTISSSSSSSCHYQCIATLSGNSSYVSGLAVDG DSLYVASSDGHIRLWPLDMAMAMVREESTSSSSQGEVSRSTVAVTGSPVKCLAATGDG LVSSHQDGTIRVWRHAGGRRRLALRAVLPTAADCLRALLLPGGGYVEVRRHKRRAWVH HVDAVTALALSPDGESMYSVSWDRSLKAWRLPGLRCAESVAAAHDDAINAVVAAPDGH VYTASADGTVKAWRRRTGQKKLSLVCVMERHGAAVNALALGGGGRVLYSGACDRSVVA WENSAGAGAGGADVRMVATATLRGHARAVLCLAADGDVVCSGSADRTVRVWRRGATAA YTCLAVLDGHGGAVKSLALARGGAGCDRCCACHVEESSSCSCAALVCSGSLDCDVKLW RVTVSEAIKGSKVHHVGRLLGLIFHLFVWLSNFVEFKGAGYIYIKGIRSTGLWYQSKQ SRYQEVDTQALGTYGYQAFALMRATRRREMRQGKHRDEMATLLTN</aaseq>

Gene Sequence

<dnaseqindica>2582..2757#1763..1882#1..1192#atgagtccgaactctgaagaaggtatcatctcccaaacaatctcaagctcaagctcaagctcatgccactaccagtgcattgccacgctcagtggcaactcctcctacgtctccggcctcgccgtcgacggcgactcgctctacgtcgcctcgtcggacggccacatcaggctgtggccgctggacatggccatggccatggtgcgagaggagtcgacgtcgtcgtcgtcgcagggcgaggtgtccagatccaccgtcgccgtcaccggtagcccggtgaagtgcctcgccgccaccggcgatgggcttgtcagctcgcaccaggacggcacgataagggtgtggcggcacgccggcggccgccgccgcctcgcgctgcgcgccgtgctgccgacggcggcggactgcctccgcgcgctcctgctcccgggcggcggctacgtcgaggtgcggcggcacaagaggcgggcgtgggtgcaccacgtcgacgcggtcaccgcgctcgcgctgtccccggacggcgagagcatgtactccgtgtcgtgggaccggagcctcaaggcgtggcgtctgcccggactccggtgcgcggagtccgtggcggcggcgcacgacgacgccatcaacgccgtcgtcgccgcgcccgacgggcacgtgtacacggcgtcggcggacgggacggtcaaggcgtggaggcgccgcacggggcagaagaagctctcgctggtctgcgtcatggagcgccacggcgccgcggtgaacgcgctggcgctcggcggcggcgggcgggtgctctactccggcgcgtgcgaccggtccgtcgtcgcgtgggagaactccgccggcgccggcgccggtggcgcggacgtgcgcatggtggctaccgccacgctcaggggccacgcgagggcggtgctgtgcctcgccgccgacggcgacgtggtgtgcagcgggtcggcggacaggacggtgagggtgtggaggcggggagcgacggcggcgtacacctgcttggccgtgctcgacggccatggcggcgccgtgaagagcttggcattggcgaggggaggagcaggatgcgatcgctgctgcgcgtgccacgtggaggagagctcgagctgcagctgcgctgctctcgtttgcagtggctcgttggactgtgacgtcaagctttggagagtgacggtttccggtttgtgatttattttttactttttatttttggtaaagagtctgtttgtgaaattaggagttttggttttgtaactgaagaaagtttggaggaattttgtgggaatttaatgaattcatgtgaaaaccctgcttttcaaaagctctcaactgtacggaataaaaaatgagtagtgctatatgacacaattatataactaatgtataactagagacatgtaactgtagatcaatcaaatgagagcatattcatatgcactgtagccgtttataaccgtcgatcaaattcagtcgtacgtgagttggacagttgggtcgtatgcataacaatttccatagaaaatagtgtagctcaagattaacatgtttggaatgcaggaattctggaaatgaattgtttgaagcaaaactctctgagttccgcatatggtattcttctgggtttaaggacaggttaatgttttagtttgagtcgatccccagtttgggagtttctcaaagtatagtttttggatgttttttagctgcaccatgttggatagttaccggctgcttgtctgcttttctgaagaagctattaaaggctcaaaggtgcaccatgttggaaggttgctgggccttattttccacttgtttgtatggctttcaaactttgttgagttcaagggtgcggggtacatctacataaaaggtacacttaagcaaagcacataatgtgcgcttacagtgatgtatatataatggcttcttacacgtaattaaataaatatttacttcttacatgtaattaaataaaggttagagtcgaatcaaacagacttataactagacttatctaggaataccctttggccgaaattgaagtggccttggatcagtagctagggaattggactaaaaagtttaagatttcttgagcccttccacagggtggtagggactaagtgcgatcagatcataggatatgaaagatacgctattgtgatcactcatcaagtgaggtatgcaaaggaggacgactactgcacgggctcccgtctagacgggataaattaatgaggataattgtttgaccaaccaaccactccttccgatcgattagcttcacgtaatagtcacatgagggtacatgcgttaatgtacatttcctcccatcaccacgcaagggttcacacgtcagcgcacgtctcctagctagagacacaacacgctcacattgtttgttttgatgctaacgtcaactccaatttgggtaccaaatacccgatacacaagtatcaagtcttgtacctatgggtattaggccgatttgagtactaggtacccaataccaagtttggtacatatgggtatcatgttgatcttggtatcaagtatcctcgatatttaggtatcaggtctactggtctatggtatcagtccaaacaatctaggtaccaagaagtcgatacccaggcgttaggtacctatgggtatcaggccttcgcgctaatgagagcaacaaggagaagggaaatgagacagggcaagcacagagatgagatggctacccttcttacaaactga</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0238700, RefSeq:Os06g0238700