Os06g0239100

From RiceWiki
Revision as of 09:12, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0239100| Description = Peptidase M10A and M12B, matrixin and adamalysin family protein| Version = NM_001063794.2 GI:297605485 GeneID:4340616...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os06g0239100

Description

Peptidase M10A and M12B, matrixin and adamalysin family protein

Version

NM_001063794.2 GI:297605485 GeneID:4340616

Length

1257 bp

Definition

Oryza sativa Japonica Group Os06g0239100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:7223943..7225199

Sequence Coding Region

7223985..7225100

Expression

GEO Profiles:Os06g0239100

Genome Context

<gbrowseImage1> name=NC_008399:7223943..7225199 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:7223943..7225199 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccaccaccacctcccctctcgttgtcgtcctcctcgccgtcgtcgcggcgatcgccgtctcgctggtgcaaccggcgttcgccttgccggccggtctcccggacatcaagtctctcactaatccatggtcggcgttcaagaacctctccgggtgccacttcggcgacgagaggcaaggccttggcaagctcaaggactacctatggcacttcggctacctctcctatccgtcgtcgtcgtcgttgtcgccgtcgttcaatgatctgttcgacgccgacatggagctggcaatcaagatgtaccaggggaacttcggcctcgacgtcaccggcgacctcgacgcggcgaccgtgtcccagatgatggcgccgcggtgcggcgtcgccgacgtcgtgaacggcacgtccaccatgggcggcggcggcggcgtccgcggccgcgggctgtactcctacttccccggctcgccgcggtggccgcggtcaaggacgacgctgaggtacgcgatcacggcgacgtcgcagacgtccatcgaccgggcgacgctgagcaaggtgttcgcgagcgcgttcgcgcggtggtcggcggcgacgacgctcaacttcacggaggccgcgtcggcggccgacgccgacatcaccatcgggttctacggcggcgaccacggcgacggcgaggcgttcgacgggccgctcggcacgctggcgcacgcgttctcgccgaccaacgggcgcctccacctggacgcctcggaggcgtgggtggccggcggcgacgtgacgcgggcgtcgtcgaacgccgccgtcgacctggagtccgtggcggtgcacgagatcggccacatcctcggcctcggccactcgtcggcggcggactccatcatgttcccgacgctcacgtcgcgcaccaagaaggtgaacctcgccaccgacgacgtcgccggcatccagggcctgtacgggaacaaccccaacttcaagggcgtcacgccgccggcgacgagcagccgggagatggacagcgccggcgccggcgagctctcccggccgtggcgacgcttgctcgacggcgccgcgggcttgctcgtcgggttgtcgctagcgtggttgtag</cdnaseq>

Protein Sequence

<aaseq>MATTTSPLVVVLLAVVAAIAVSLVQPAFALPAGLPDIKSLTNPW SAFKNLSGCHFGDERQGLGKLKDYLWHFGYLSYPSSSSLSPSFNDLFDADMELAIKMY QGNFGLDVTGDLDAATVSQMMAPRCGVADVVNGTSTMGGGGGVRGRGLYSYFPGSPRW PRSRTTLRYAITATSQTSIDRATLSKVFASAFARWSAATTLNFTEAASAADADITIGF YGGDHGDGEAFDGPLGTLAHAFSPTNGRLHLDASEAWVAGGDVTRASSNAAVDLESVA VHEIGHILGLGHSSAADSIMFPTLTSRTKKVNLATDDVAGIQGLYGNNPNFKGVTPPA TSSREMDSAGAGELSRPWRRLLDGAAGLLVGLSLAWL</aaseq>

Gene Sequence

<dnaseqindica>43..1158#ctcttcaaatttcttttacctcgcccaagaaccatagctgcaatggccaccaccacctcccctctcgttgtcgtcctcctcgccgtcgtcgcggcgatcgccgtctcgctggtgcaaccggcgttcgccttgccggccggtctcccggacatcaagtctctcactaatccatggtcggcgttcaagaacctctccgggtgccacttcggcgacgagaggcaaggccttggcaagctcaaggactacctatggcacttcggctacctctcctatccgtcgtcgtcgtcgttgtcgccgtcgttcaatgatctgttcgacgccgacatggagctggcaatcaagatgtaccaggggaacttcggcctcgacgtcaccggcgacctcgacgcggcgaccgtgtcccagatgatggcgccgcggtgcggcgtcgccgacgtcgtgaacggcacgtccaccatgggcggcggcggcggcgtccgcggccgcgggctgtactcctacttccccggctcgccgcggtggccgcggtcaaggacgacgctgaggtacgcgatcacggcgacgtcgcagacgtccatcgaccgggcgacgctgagcaaggtgttcgcgagcgcgttcgcgcggtggtcggcggcgacgacgctcaacttcacggaggccgcgtcggcggccgacgccgacatcaccatcgggttctacggcggcgaccacggcgacggcgaggcgttcgacgggccgctcggcacgctggcgcacgcgttctcgccgaccaacgggcgcctccacctggacgcctcggaggcgtgggtggccggcggcgacgtgacgcgggcgtcgtcgaacgccgccgtcgacctggagtccgtggcggtgcacgagatcggccacatcctcggcctcggccactcgtcggcggcggactccatcatgttcccgacgctcacgtcgcgcaccaagaaggtgaacctcgccaccgacgacgtcgccggcatccagggcctgtacgggaacaaccccaacttcaagggcgtcacgccgccggcgacgagcagccgggagatggacagcgccggcgccggcgagctctcccggccgtggcgacgcttgctcgacggcgccgcgggcttgctcgtcgggttgtcgctagcgtggttgtaggcagcaccacatttccagtgaccatttccatcgctttggtttggttggtcattttggtagagttattttttgtgctatttttttggtttggattaatta</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0239100, RefSeq:Os06g0239100