BGIOSGA030169

From RiceWiki
Revision as of 17:21, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA030169

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA030169, complete gene.

LocusTag

OJ1695_A02.5-1

Ensembl Transcript ID

BGIOSGA030169-TA

Ensembl Protein ID

BGIOSGA030169-PA

Length

7794

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:3290241..3298034

Sequence Coding Region

3296981..3298034,3295577..3295746),complement(3293916..3294285,3290241..3290269

Genome Context

<gbrowseImage1> name=IndicaChromosome09:3290241..3298034 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:3290241..3298034 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCCGACATGGAGTCCATGGCTACACTTATGGAGTCCACAGGCTCCAAGCTGCAGCAGCTTCAGCGTGCATTTGCAGAGCTCGAGAGCCAGAGCGCTGTTTCCTTGAACTTAAAGTGGAAGCAACTGGAGGACCATTTCCATGGGCTTGAGCAGTCGCTCAAGAAAAAGTTTGATGATCTGAAAAGGCAGGAAGAGGAGTTCGAGGAGACGGTTGCAAAGTCAGAGCAGATGCTGGAGCAACAAGAGGCTGTTGTCGTGGCAAAGGAACTGACTTCTCTTGAAAAACTGCAGCAGAAAAGGGATGCCGCGTTGGCTGTGATCTTTGGCAAGTCCAAGCTGAACTTGTCTACGCCTCTTATCAACCCAATCAGCAAATCCGTGAATAACAATGCTGTGTTAAATGGAAACATCGGTGGTAGTCTTTCTGTTAAGTGGCCCAAACCTGCAACTGCGCATGGTGCATACCTGCAAGATGAAAACACTGCTGTGAAGCCTCGTTCTCAACTTGTTGTCCTCTGTGAAGAGATGAATGTTAACGGGCTTCATAAGTTCATATCAGACAATCGCAAAGACTTAACATCCATCCGTGAGGAAATCCCTGTTGCACTTAGGGGAGCAACTGATCCATATGGCTTGGTGTTAGCTTCTCTAGAAGACTTCTATTTTGGAGACAATCTTATATTGGATGGCAAAAAGGATGGAAACCTTCTGGGTGTACGGAGGACGTGCCTCATGTTGATGGAATCACTTGCTCAGCTGCAAACTGATGCTACTACTGGTTTCATATCGGAAGGTCAAGTGCTTACTGCAAGTATCAAGGAGCGTGCAAAAAAGATTGCTCTTGAGTGGAAATCCAAGTTGGAGAGCCTTGACTTTGATGCTAGCAATGGGAACTGCCTGGAAGCACATGCGTTTCTTCAACTCCTGGCTACCTTTGGTATATTTGCTGAATTTGCACAAGATGAGCTGTGTAAGCTACTTCCCTCAGTCAGTCGTCGTCGTCAGACACCTGAGCTTTGTAGAATACTTGGATTGTCCCAGAACATGCCAGGTGTCATTGGAGTTCTGGTTGAAAATGGGAGAACTATTGATGCAATTAATTTGGCTTATGCATTTGAGCTGACTAATCAGTTTGAACCGGTGGAATTACTGAAAGCCTATCTACAGGAGGTCAAGAGTGTGCCACATTTCAAGACTGGAAAGATATCTCTGCAAGTACAGAATGAAATGAATGAACGAGAGCTGTCTGCCTTGAAAGCTGCTATTAAGTGTATCGAGGAGCACAAACTTGATGAGAAATATCCGATTGACCTGCTTCAGAAAAGAGTTATCCAGCTAGAGAAAGCTAAGGCAGACAAGAGGAGGGCTGTTGAAGCTGCAAAGCCACAGTCTAAGAGGCCTCGTGCCAATGGATCCGTATATGCGCCACATACTAGCTTTCCTGACAAAAGCTTCTACCAGGCTGCTCCACCGCAGAGGCATTCCTACCCTTACGAGAGGCAGTATGTGTATGGTGCTGAGGCCCATCACCATCCCACAATGATAAGCTCAGCTCCCTATGGCATCTCACCTGCCCACACAACATATTATGAGAAGGATGGGGAACCTAATCGTGGATGA</cdnaseq>

Protein Sequence

<aaseq>MSDMESMATLMESTGSKLQQLQRAFAELESQSAVSLNLKWKQLEDHFHGLEQSLKKKFDDLKRQEEEFEETVAKSEQMLEQQEAVVVAKELTSLEKLQQKRDAALAVIFGKSKLNLSTPLINPISKSVNNNAVLNGNIGGSLSVKWPKPATAHGAYLQDENTAVKPRSQLVVLCEEMNVNGLHKFISDNRKDLTSIREEIPVALRGATDPYGLVLASLEDFYFGDNLILDGKKDGNLLGVRRTCLMLMESLAQLQTDATTGFISEGQVLTASIKERAKKIALEWKSKLESLDFDASNGNCLEAHAFLQLLATFGIFAEFAQDELCKLLPSVSRRRQTPELCRILGLSQNMPGVIGVLVENGRTIDAINLAYAFELTNQFEPVELLKAYLQEVKSVPHFKTGKISLQVQNEMNERELSALKAAIKCIEEHKLDEKYPIDLLQKRVIQLEKAKADKRRAVEAAKPQSKRPRANGSVYAPHTSFPDKSFYQAAPPQRHSYPYERQYVYGAEAHHHPTMISSAPYGISPAHTTYYEKDGEPNRG</aaseq>

Gene Sequence

<dnaseqindica>1..1054#2289..2458#3750..4119#7766..7794#ATGTCCGACATGGAGTCCATGGCTACACTTATGGAGTCCACAGGCTCCAAGCTGCAGCAGCTTCAGCGTGCATTTGCAGAGCTCGAGAGCCAGAGCGCTGTTTCCTTGAACTTAAAGTGGAAGCAACTGGAGGACCATTTCCATGGGCTTGAGCAGTCGCTCAAGAAAAAGTTTGATGATCTGAAAAGGCAGGAAGAGGAGTTCGAGGAGACGGTTGCAAAGTCAGAGCAGATGCTGGAGCAACAAGAGGCTGTTGTCGTGGCAAAGGAACTGACTTCTCTTGAAAAACTGCAGCAGAAAAGGGATGCCGCGTTGGCTGTGATCTTTGGCAAGTCCAAGCTGAACTTGTCTACGCCTCTTATCAACCCAATCAGCAAATCCGTGAATAACAATGCTGTGTTAAATGGAAACATCGGTGGTAGTCTTTCTGTTAAGTGGCCCAAACCTGCAACTGCGCATGGTGCATACCTGCAAGATGAAAACACTGCTGTGAAGCCTCGTTCTCAACTTGTTGTCCTCTGTGAAGAGATGAATGTTAACGGGCTTCATAAGTTCATATCAGACAATCGCAAAGACTTAACATCCATCCGTGAGGAAATCCCTGTTGCACTTAGGGGAGCAACTGATCCATATGGCTTGGTGTTAGCTTCTCTAGAAGACTTCTATTTTGGAGACAATCTTATATTGGATGGCAAAAAGGATGGAAACCTTCTGGGTGTACGGAGGACGTGCCTCATGTTGATGGAATCACTTGCTCAGCTGCAAACTGATGCTACTACTGGTTTCATATCGGAAGGTCAAGTGCTTACTGCAAGTATCAAGGAGCGTGCAAAAAAGATTGCTCTTGAGTGGAAATCCAAGTTGGAGAGCCTTGACTTTGATGCTAGCAATGGGAACTGCCTGGAAGCACATGCGTTTCTTCAACTCCTGGCTACCTTTGGTATATTTGCTGAATTTGCACAAGATGAGCTGTGTAAGCTACTTCCCTCAGTCAGTCGTCGTCGTCAGACACCTGAGCTTTGTAGAATACTTGGATTGTCCCAGAACATGCCAGGTCAGTGCTATCATCGATTAATAATGCAGCTTGTTCCATTGAGCATCAATAATAAATGGAATTTTCTATTTCTCTTTGTCACTCAGATGTTTAGAGAACACATTCTGACCACTTCAATAATTGTTCATATATCTATATATCTATACCATGGGATTTATTTTCTAGTTAGTGGCTGCAGCAAGAGATGCCTACAAGTAATCAGAATTGTAGCATTGCTGTTTAGATAATTTGTATGGAAAATCTGCAGGCTGCTACTTATAATTTGGCAGCCGCACACCGAACCTCACTATCTAGTATCTGTATTGTACTTAGTGGCAGCAAAGTTTCCACAGCTTCTAAGCTATGTTATATGCTCAGTTGAGGTCTTAATTTAACTGAATGTATTTACTAACTTATAAATAACATATATGATCATATATTCTGGAGCATAACAAGCTAAGAGGACGTCATTCAATTCGCCGACCTTGCCCTTGAGCTTGATTACATACTGGGATGTGCTTTTGTGCATCTATTTTAGAAAAAGAATAATACGAATATCTAAGAAATATGGTTAATATTATTAGGAGGCAAATATGCATTAAACAAAAAAAGATAACCATTGAAAGATTTGCCACCTGCATGGTTTTGAAACAGTATTAACCTAGACGCTAGTCAGTGGTCGGTCAATGACTAGCGGCTGTTGACTAGTTAGTAACTAGTCGGTGGTTCCAATATGTCCAAAAATAAAATTTTGCTCAAAAGTAGCTAGCCATTTAACATGTTTTATAGCATATTTTCAGATCAAGTACTGACTATTGATTATTGAGAAATATAAGACTGACAATTTGATAAGCTGCATGAGGTGAAGGCGAGAGAGCACGTGGCGGCTCTTGACTGCTCCAGACGTGTCATGGGAGGGAATAACCATAGGACCTTTCCCACCCCTCTTATCCCACCCGTTTAGCCCAAATTTTCAGTCCATGCCACTTTTCTGTTTCCTAGTTGACCTGTTTAACCGACTAGTCACTTGACTAATATTGATCAACTTGAACGTACTAGACCGATTTTAACCAACTAATTCACCTTTTACCCCCTGACCTAGGTGGATTGTTGCTGACTAGTGACTAGTCACCGAGGTCCCTTTGCTCCATACTTTTAATTTTGCCTTTCTTCTTTTCCGCCTTTCTGCTGCTGCATGTTCTTTTCGTTTTTACAGGTCAGCACATTTTCTCATGAGATATTTTCTTGATGTTAGGTGTCATTGGAGTTCTGGTTGAAAATGGGAGAACTATTGATGCAATTAATTTGGCTTATGCATTTGAGCTGACTAATCAGTTTGAACCGGTGGAATTACTGAAAGCCTATCTACAGGAGGTCAAGAGTGTGCCACATTTCAAGACTGGAAAGATATCTCTGCAAGTACAGGTGCACTTTTTTCATTTCAATTTTAAACTGTATGATACCCTGTAAATTTTCTTTCACAGAACCAGGGTTCAAGATTGAAGTGGGAAACATAGTAATCCTGGTCTGCTCTGATTTTCTTTTTTTTTAAAAAGGCATGGTTTAATTTAGTTCCATTTTTTCCCTCGAACACGCAGGAGGGAATTTAGTTGCGAAAATTATCACTAAGAATTTCAAAACCAAACACTAAATCATTGCAAGACTTCCCTTAAAAAAAATCAATATACACCTGTAAAGGCTGAGTGAAAATGGAGTCGAAATGAACAGGATTGCTTGTAGATTGTAGCAATTCTGTTCGATGGATCGGTTGCCAGTTGGTGACACATGCATTCATTCTCTAATTGAATACGATAAAAGTTCTTTTTTCGTGAAAATTACGACAATATTGTGCTGGAGTATTTGGACTGAAAGCAACTTGTTCTCTAGTATTCTTTCATGTGGCACCATGACATCCTGTCTCTACAATCCACAAACGGCTCCTCATGCTTCATACCTAGTATAGAGATTGTTCCAGAATTTCCTTGGATTGACTAGTTTGGATGGGATTTTTCTTAGATCCATGAAAGTGAATCCCGTGTAGAACTACTAGTTACACCAACTCTGTTAAGAAGCTCTGAACCACATGAAAGTTTATTTTTTTCAGCTCGTGGCCCTTTGCCACCATAAACAAAGTTCCAGTTCTTTTTCTAACAACAGGATAGCTTAACAGTCTTTTAGGAGATTATTTAGTACTTGCTCTGTTTTTAACTCTAAGCTAGTTTCACCTGTGCAACTGTTTGAACTTTCTAATTATGTTGTGTGATCCAGCACTCCAGCTGATCGTGTTTGAAAATTTCCTGATATAAATGGTAATGAGACATTTGGCCCTTTCAGCAATTGAATTCAGCTACTTTGATTCATTAGGTTCTATGGCTGTCAAGTCATATACTGTAATTGTTCACTCAATTATTTGATTTATTTATCCTGGAATAGTTAAAGTACGGGGTTTGATCATATCATAAAGTTAGCAAATCATTTAGCCACCAATCAGCTTCAATGTAGAAGCTGCAGTGCTGTTCTGAAGAACTTGAATAATAAAGAGCTACTTTAGCTTGCAAGATACTATTCAGCTATAGTTGCTTGCTACCTTTTCTTTCTTGTGTGGGGTAACAAATATTTTCTCTTCTTGCTGGTCTGTACATTTTTTAAGCATATCTGCGTGCATTCCTAATTAATTGTGATTGTAGTATATCTGATGAATTACCATATTATTCAGAATGAAATGAATGAACGAGAGCTGTCTGCCTTGAAAGCTGCTATTAAGTGTATCGAGGAGCACAAACTTGATGAGAAATATCCGATTGACCTGCTTCAGAAAAGAGTTATCCAGCTAGAGAAAGCTAAGGCAGACAAGAGGAGGGCTGTTGAAGCTGCAAAGCCACAGTCTAAGAGGCCTCGTGCCAATGGATCCGTATATGCGCCACATACTAGCTTTCCTGACAAAAGCTTCTACCAGGCTGCTCCACCGCAGAGGCATTCCTACCCTTACGAGAGGCAGTATGTGTATGGTGCTGAGGCCCATCACCATCCCACAATGATAAGCTCAGCTCCCTATGGCATCTCACCTGCCCACACAACATATTATGGTAATGGCTATCAGGTTCAGTACCAGGTACCATATATCCACTGATGGAGAGAGCGTAATGTGCTCTTTCCTAACTATGTACTAGCTTTTAACCTGCTGCTACTATGTGCTGTAGTTGTATCAATCCACTAGCTAGACTGCCTAGCTTAAATTAGTTCGACCACTCTTGTGTGTGCTGAGTGGCCAGTGTGAAAATCTGTTAATTTCCCTCACGACTTATGACATAATTTACTTCTAATGTCTAGTTAAAATAATTTGCTTTTGTTTAATATATAGCCTATGGCATATATATGTTGGAGTTGAGATAGTCCCTGTACTGCAGAATGCTGGAATTATGTGCTCTGCTTGGTGGAATTATCCACTAATTCCTTTCTGTTGCACTTGAAACAAAATTGTTGTCCCAAATCTTTTTATTTGATGATGGTAGATTTTTGTATTTTACGAGTTCAACTGCAAAGCTTTGGATCTACTATTTCAATGAGTGTGCCTGGAGTCCAATCGACTCAAATAAGTAACTGTTAGTTCATATTGAGGTTACTAATCAAATACAGAAAATTAATCATGGTAGAATATCAGATGACCCCTGGATAGTATAGTACTATCTCACCAATCATGTCATTTAATTCCTTTATTTTTTTGTTCTGTACAACGCCGCCAAACATTGGCGTTGAGTTCTTATTTGGGGTGGCACGAATTTGCTTATTTGCTTTGTCATTGGAGCTCAGTATCATTTAGATTGGTGCTGATCTTCGTTCTTTCTAAAACCAGGGTTTACTTACATTAAGCAAAGTATAGCTTAGCGTTAGATGGTTTTGGCTCCCAACTATAGATTTGAACCACACCCTCATTTCTACAATTAGTTTTTTTTTCCCAGAAATAAGGTTCTTGAAAGGGCCATAATGCCAAAATTTTAGCCTATATAAGCCTGATAGATTAGGCTCCAATGGATGATACATGGTAGTACTACCTTCGTCCAGTATCATATAGATACTGCTAGCATTTAAATTTTGTCCTATAATATAATAACTACTTCCACGTCTACTTTTTCATCTTAACCAATCGCAAATTCGCAACTCTCTAATTTAAAATCACCCTCATTCCTTAATTTCTTGAAAAAGAAGTGCAGAAGCATGTCCAATATTACTTCACATTCTAAGCTAATCACAATCCTCTAATTTAAAATCACCCATTCTTTAATTTCTTAAAAAGAAAGTGCATAAGTCCCTACAGTATAGGACAGAGGGAGTACATAAAAAAAGGAAGTGCACAAGTCCTGGACAGAAGGAGTATATCTACCACAGAGGGTGTCGCATGTTAGAGTGTGTTTGGTTTGGTGAATGATGTTGGATGGGAGATAGACCGTCTGATTTTTTTTTGTTATGTTTGGATAAAGAGCAGGGTGGATGGGGCAACCCAAAAAAGAAAATATTCCCTTAATATGCTAGATGAGTAGATCCGGCTAATTTGGCCGAATAAAGCCATCCATATTTTAGTTTGGGTGACTTGGTCTATTCCAATTGGATGTGGTTGGTTTAATTTTTTGTTAACAAGCTTCAAATGTTTTTTCCTCCTGAACTACTTATCTAATTTGTAATCCGATTATACTATTATACTAATTACAATTAAATCTCTAGTTATATTTTGATAAAAAAAATTAACAAATGTGCCATACTAAATTGTGGCTTATCCCATTCATGTTATATCTCTCTAAACAAATAAGAAATTGGAATCATCCTATCCATACAAACCAAATAAAAGTTGGATCATCGTATCCAACAGAGCATGGATGACCATATATTATCCATGTATGGCTTTGAAGCAAACGCACCCTATGTGATGGGATGTGATATAGCACGAAGAACATAGAACATTAAGATACTGAGCAAATATACCATGTTGAAATCAATTGCCAATTATACCCCTTAAAGAAAAGGCAAATAAACGAAAATTGACTAAGACATCTATATATATATAAAGTTTTCGCAACTAATGTTGTCACGAAGAAACAAAGAAATACATAATTCTATATAGCTTATCCAGAGGGGGAAACCCTAAGATAAGTATAATAAAAGGGTGGTTCCAACCGTTCTGTTTCCTCTTCAAAGAATAGAAAAAAGAATCTTTTTTTTAACTAAATTTGACGCTGTTCTTAGTTATGATGAAATCATTCTTAGCTTTTTCCGTGGATTATGGACAACTATATTAATTACAAAGTAATTACATCAAACCACCACAGAAAGAAAGAAAAAACTCAAAGAACTACAAATCATTCACACATCTATGTTTCTTATTTGTAATTGACCAGCCATACCAAAAAGGAAAAAAAAAAACAAATTCGACACACTCTGCTCTGTAGAGTGTAGATTGACTGACTCATGGATCAAGCCATTAGCATCAATGCTGCTACGGCGGCGGCCGCGGCGGCGGTCACCCACCGGGCGAGCGGCGCCGGAGCGGCGGCGCCCTTGTGGGCTTTGACGTCGCCGGAATCGTCCGACGAGTCGTCGCTGCTGTCGTCGGCCGCCGACTTGTGCTTCTTGGACGGCTCGGGCGCGGGCGCGGGGGCCTCGACGACCTTGTAGAGCTCCTTGGGCTTGAGGAACTTGGTGACGGCGTAGACGGCGAGCGGCTCGGCGTCGCCGACGGTGGCGGTGACGGCGGAGTTGACGACCCTGGTGTCGAGCGTGACGGTCTCGCCCTTATTCTGGACGTCGTAGCTGTAGTCCTTCTTGGACTCGCTGGCGGTGGCGAGCGTGGTGACCATGCCATTGTTGGACTTGAGGAGCTGCAGCGAGAAGTAGTCCGGGACGGCGTGGTAGAGGAGGATGGCGGTCTTGGCCTTGGCGGTGAGGTTCTTGTAGGAGGGCATGAAGGCGGCGACGGCGGCGTCGACGGGGCAGAAGAGGGTGAGGCCGTTGTCCTTGGTCTCGTTGACGGCGCGGAAGACGTCGGCGTTGGCGGCGAGGAGGCCGGCGAAGGACTTGCAGTACTTCTTGGAGAGGAGCTCGGTGAGGTTCACCGGCGCCGGCGGCGGGACGGGCGCCTCGGCCTCGGAGGAGGACAGCACGGAGCTCACCTGGAGCACGGAGATGTCGTAGGGGATCTCCTTCACCGACTTCACGTACCTCGACGGCTTCGCGCTCTCGTCCGCGTCCTCCGAGATGAAGTCGATCTTCCCGCCCTTGTGCGACGTGATGTTCACGTACCCCGTCGTCCCCGGCGCCGACCCCGTCGCCTGCATGCAATTTTATTTTCATTCATTTCAATTAATTCATCATCGTGGTTATTATTTAATTAATCATCGTGATTATTATTTAATTGTATTACAAATGGACGGATCACGTGGAGCATGAAAATAACAAAATTTGTAAACACTGGCTGTAAACTTCATTAATTGGTTCAAAAGCACAAATTAAAGAGTAGTAGAAAATTGGATTAATTATCTTTGAACTTCATCAACACCGAAATCCGAAAGCAAATAATACTGAGGGCATGCATTTTTGTGTTCAGACTAAGATGGTATTCTTGTAATTGTGAAATATGATCTGTCCATATGACAAAATAGACGTTGAGTCTCCATTGACAAATAATATGATCTGTCCAGGATGGCTCAATTAATTAATGAGTATCATATTTTTTTTTTCCAGAGAAGGATGGGGAACCTAATCGTGGATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030169