BGIOSGA030198

From RiceWiki
Revision as of 17:21, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA030198

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA030198, complete gene.

LocusTag

P0448B11.8-1

Ensembl Transcript ID

BGIOSGA030198-TA

Ensembl Protein ID

BGIOSGA030198-PA

Length

7807

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:1941763..1949569

Sequence Coding Region

1949509..1949569,1949378..1949429),complement(1948438..1948511,1947575..1947696),complement(1946861..1946943
,1945395..1945476),complement(1942234..1942695,1942033..1942139),complement(1941763..1941955

Genome Context

<gbrowseImage1> name=IndicaChromosome09:1941763..1949569 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:1941763..1949569 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCATGGGAACTCACTGAGGTCCCAGGCAACCCAACTCCCTCCCTCCGTGGCTCTACAGTTGAAGTGATTGCTGCCAAGATTGAGCCCAAGTTAGCCAACAGTCTCATTCGGCAATTGAGTCAAGCATGCCCATTGGAGAATCTTCGGCATGTAAAACGGGTGCGTCGGTGCTGTGAATATGGTGAAAAATCTGAGTTATCAATCATCTTATGCCTTGCAACTGGGCCTGAACATTGTAGCGAAATGTTTCCTCAAGATGTAAAAAAGATTGTAGGTACCTACGAATTGAATACTTTCATTGCAAAAGTTGCGAGGTTTCCTGCTACTTCAAAAGAGGAGTGGGAGGAACAATGCAAACTTTGGCCAACATCTTATCATCCCCCACACGACTTGGATGGTGTATCTGGATTCAAAGAGTGTGAATTGCCATCAATATTTAATTGCATGAGAACTGCACTGCGGTTATCTGAGGTGGGCAATGCTGCTGTTGTTGTTGATCCATCAACCATGCAGATTATTGCAAAGGCTACAGACCAAACGCTCCAACATGATAGTTTAAAAAGTAACAAATGTGCTGAATTGAATTCAGACAGCCCCTTCTCATCACTTGAAGTAACTGAGAAGAAAGGGAGCAGGTTGTTCCTGTCAAACTCCAATGTTTCTAAATGCAACAGCCTGAATATGGAAGCCTCATGTTTAAACCCTTGGGGATGGATGAAACCAAGGCCGTCTGAGCAGAAGTCATTGCCCTGTGAAGGTGGTTTTCCATGGCACCCTCTGAGACATGCTGCCATAGTTGCGATTGAAAATGCTGCGGAGAGGGATAAAGTGATGTTCCCTTCAATTATATCATCAACCAAACCAAATTCAGATGGAAATATGGAGTATTATTCTGTTAATGAATCAGCAAAACGACTAAAGGTGGATAGAAATGACGACAAAAAAATTGCACATGAAGCAATCTGCGATGACTTGTCAGAAACCAGACCATACCTTTGTACAGGATTTGACATTTACCTAGTCTGGGAACCTTGCTCAATGTGTGCGATGGCACTTGTACATCAAAGATTCAAACGTATCTTCTATGCTTTCCCAAATCCAATTACTGGAGCACTGGGCAGTGTCTACAGATTGCACGGGGAGAAAAGTTTAAATCATCGTTACTCTGTATTTAGGGTAAAAGTGCCCGAGTCATATTCGAATAGTTCGGGCGATTGTTCTGACAAATGCTGA</cdnaseq>

Protein Sequence

<aaseq>MAWELTEVPGNPTPSLRGSTVEVIAAKIEPKLANSLIRQLSQACPLENLRHVKRVRRCCEYGEKSELSIILCLATGPEHCSEMFPQDVKKIVGTYELNTFIAKVARFPATSKEEWEEQCKLWPTSYHPPHDLDGVSGFKECELPSIFNCMRTALRLSEVGNAAVVVDPSTMQIIAKATDQTLQHDSLKSNKCAELNSDSPFSSLEVTEKKGSRLFLSNSNVSKCNSLNMEASCLNPWGWMKPRPSEQKSLPCEGGFPWHPLRHAAIVAIENAAERDKVMFPSIISSTKPNSDGNMEYYSVNESAKRLKVDRNDDKKIAHEAICDDLSETRPYLCTGFDIYLVWEPCSMCAMALVHQRFKRIFYAFPNPITGALGSVYRLHGEKSLNHRYSVFRVKVPESYSNSSGDCSDKC</aaseq>

Gene Sequence

<dnaseqindica>1..61#141..192#1059..1132#1874..1995#2627..2709#4094..4175#6875..7336#7431..7537#7615..7807#ATGGCATGGGAACTCACTGAGGTCCCAGGCAACCCAACTCCCTCCCTCCGTGGCTCTACAGGTTTCTGTTTTATTCAATCTAGTTATTTTTTCCCTATGCTAGTTTCATAGTGTTATTTCTTATTTATTTTCTTGGGCAGTTGAAGTGATTGCTGCCAAGATTGAGCCCAAGTTAGCCAACAGTCTCATTCGGTAAAGGACTGGAACTCCACATTTTCTCCCTTTTTAATGCTAATTATAGCATTCTCATTTACAAATTTCAATTCAGGAATTTAGAACTGAATTTACCAAGAACTTGAATGGATTGTTTACTCTGTTCTGCGCAATTTAGTCGATAAAAAAACAGAGAGATGGCATTGTTTTAGGTTACGCTGTATTATGAATTTTATAATGTTACATTTCGAATTTAATTTCTCTTGATAGGACTTTTTCTTTATGTCATCGTCTAAGAGTTAAATAAAAATCTTAATTTGAATATTTCTTGTCAAAAAGACTGAATACATATTCGTTTAATTCATTTCAGGAATCATTGGGATTCAGAATCTAAACCCCAACTAATTTAACAGAAGCTTATATAATGATTTAATAGTAAAGAATGTACATATATTGATTACAATTCGTATGTTGGCATGAAATTGGAATTTTAATTGTTTTGTTGATAGTTTCTTCAAATAGGAAGTTTGAATTATGTGTCACAGTTGCTTAATTTCCGATGTCTAAATGGCATGTGTATCTTTATTGAGTGAAATACATGAGCAGTCCCTAAACTTGTGTGGTGGTGTCACTTAGGTCCCTAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCAGAAGTTTAAGGACCGGCCATGTATTTCACTCATTTATTTGACATGTTTGTCTCTTCTTTTCATGTGCTGTTATTTTTCTTTTGTTACGGTTTGACTATAATTAACAAGTGGGCTATATTTAGAGCAGTGATGTTATCAATGTGACTGGGTTTCAGGCAATTGAGTCAAGCATGCCCATTGGAGAATCTTCGGCATGTAAAACGGGTGCGTCGGTGCTGTGAATATGGTGGTAAATGTTCTTTTTTCTTTTCTCAATCGATTCCATGATATGTCCATCTACTTTATAAGTTGGTCCAGCTTCACCATTCATCCATACACTGTAATACTGGCCACACATCCAACACCCAAACAAAATAGATGGTTTGTAGCAGCTTTGGGTCTACTGTTGTAAAAACTTGTGCATGCATGTGCACGGCAGTTTATATGAAGCCAAATCATCAATTCAACATGCAAAGCTCCACCTTTTCAGATTGAGCTTAATTTGGTCTGTCATTGTGAATACCAGGGGGTTGGGGGTGGTATTGCCCCCAGAATTATAGTATATGAGTGTAAGTGTAACAAAACTATCTTAAATGTGGATTTCCAACCCTATAAATGATTATAACCTTGGTGGAATTTATCAGCAGGCTTTCTCTTCAACAAGTTAAATATATAATTTGATTCCTCATTCAATGATACTCTTCAATTTTTAATGCTGATATTGTCATGTGAGATGCTGAACCTTATTTTCAAGAAACTTAGTCTTACCTAAAAAAGCAGCAGAACTGGGAACTAAAATCTAGAAGCTCATAGTGTTTTCCGTTGATTCTGCCTAAGAAGAAGTGCAAGAGTAGGCTAGTACATGCTGATCCATTGCTAGAATATGGACATAAAACTGACCAGCCTACAAATGTTTTAAGTTAGTTCCTGGGTAATTATGTTGAACACTTTTCTGTTTACTTTTATAATTTGATTATCTTTTCCTTGACAGAAAAATCTGAGTTATCAATCATCTTATGCCTTGCAACTGGGCCTGAACATTGTAGCGAAATGTTTCCTCAAGATGTAAAAAAGATTGTAGGTACCTACGAATTGAATACTTTCATTGCAAAAGTAAGTACTTTTGTTAACCTTGGGAGTTCGGAAATTTGAGTTCTCTGTTGTTTTTGTTGGCATATTGGACTTATTTACTAACTTAATCATGTCATACATTCATTAAGATCAAAATTATTGGTCTCTAGTTTTACTTATATGGAAATTATCCACCAAGATAGTGATTGTTCCGTGTTAAATCCTTACATGTTTCTTTGTGTGACCTACAGGCAATGTGAAGTGATATTTAATCCTCCTGAATCCATCAACATCTAAGGAATGTATGGATCATAGTAGTAATAATAGATAAAGATATAGCATTTTATCTTTAGGTAATCCTTCCAGTCACAAGGAATGTTTGGACATCTGCAAATGAAAGTTATGATATATTGAAAAATACAGTATGCTCCAAAACAATCTGCAAATATCATTTTCTTGTGTACAATCTAAATATTCGTAGAGATCGTGTTGATAGCCAAAGTTTATCCGCACAAGTGCACATGCACCAAAATGTCACTTATTTGTGACCAGGGGAGTATCATTCTTCAAGCAATTGATTAGTAAGAAGATTTTGCTATGTTCTTATGATATGAATCTGTCTTTATATTAGGCATATCATATATCATTTATTGTTGCTAGAAATCTTTCTCAGGTTGCGAGGTTTCCTGCTACTTCAAAAGAGGAGTGGGAGGAACAATGCAAACTTTGGCCAACATCTTATCATCCCCCACACGAGTATGTTTCTGCACAGACCACATTATGTTTTATTCTGATGAATGTTTAAGTAACAATGGTTATGAAACTCAGTAACAAGTACGTACTAGGTTGCCTCACCTTGTAGCGGCGAGTGTATGGTAATCCGGGTCTTAGTCAGCCTAAATATCTGGTTTGCCTATTTTTATTTTCCATTTATGTATGTATATTCACATAATATCAAATCTGCAAGGACTATGCCTCGTCACTGAATCCCTGCCACAAAATTAATATCTATCCTACCATCTTCTCATCATAAATAGTTACTCTCTCTGGTCTCAAAGATGTGTTTTGGATGCTTACACGACCTGGAACAACTTTGACCACAAATTTCTACTCCAAGATATTTCTATGACCCGAGAAAGTTATAATTTTATGAAAGTATTTTTCTGAAACAAATCTACACATATTATTCTCATGCATGCAACCTACATACTTAAAAAGATATTGATGTTCAAAGTTCTTAATTTTTTACTTGAAACGCATCAAAAAGACCAAAACAACATGTTTTCAAGACCGATAGGAGTAGTTTCTAACTAACTTTAATACCAAATCAGCAACCGAAAGCTATCATATGGCTAAATTCATTGGTCGACATGTTCTTGACATACCTTTTAAGTCCTAGAACTAAACCATAAGCCTGCTAATCACTAGCAAAAAAAACATTGTAATCACTATCATTTAACTACCTTGTAAACTGTCATACCAAGTAGACCGATTAATTGTCCCATAAAGCCACTTAACTTGTTGTCTTACTGGCCTTGTTGAGAAAGGCTTTCCCAAGCCGGGGAAGAGATCCTAACATGCCTTAATCTGTTTTGGGTTAGCTGTTTATCAAAATCAATTTTGTGGATGATTTGTCTCACTCATAATTAGCTTGCTTTGTGACCAGAGTGTAATCTGGCATGGAACAATGTCATTTTCATCATATTTAGAGGGTTCAAAGTTCCATGGTTGAAACTATTGAAGGGTCATCTTTGATTTTTTTTTTCTTTACAGTGGACTACTACATCAAGAGTATTAACTGCATTTAGTGCCAAAATATCTTCTTTGTAGCTATGACCAGATATCAATGTAAAATGTACTTAGAGAGTCATAGGTGAAAAATGCAGGTGCCAAGTGTCATCTCGCTTTGTATTATTTCTGGATGGCAGTGAAACCAGGGTCATCTGTACCATACAATATCATCTCTTCCTAGTTATCCATCAGATTATACCTTACAATACAAATATTGATATACTAATTTCTCCTCCACATGCTCAGTTGAGTTGGACTTGCAATGAACCAATAAACCAAAAGTTAGCTGGAGCATGTTTTATTGCATTTTGTTTTACAGCTGTGCTGATAGCCATTTTGTTACTTGCAGCTTGGATGGTGTATCTGGATTCAAAGAGTGTGAATTGCCATCAATATTTAATTGCATGAGAACTGCACTGCGGTTATCTGAGGTGACTTTACTGTTGTTTTTAAAGTATTCCTTTCTTGCTATGCTATAAATATAGTATTCCACCTGGTGTGGGCACTATGCTTGCATGTTTCTTTAGGATGTTAAGTTGTTAACCAGTGCTTTAACATGAACAATTGAACATCATTGGTTAGCTACCTATGCGTTCATGCGTATATCAAAGTTTATAGAACTGGCAGTAGCCAGCTGGTAAACCCAGGTAGTGAATTGAGAAAGAATAATAATTAAAGTATCATTCTCATATATATTCCTTGCATATGGCCTCATCACCTTTAGTCGTGCAATCCCACGCTACATTTGTATTGAAGCCACTAATTATGGCTTCTGAGCCTTCCTCCATTTGATGAGGAATTTTGGCCTGACCATCTTCTGAAAAGGATAGCCGTAGTTTTGGTGGATATGATTTCAATGATCCGGATATGTATGATCACAAAGATAAATTCCTGTGAGCAATCTGATGCTGATTCTAGGCTCCTTCTATTGCTAGCTGTTTCAGGTTTTGTCTAGTTCCAATTGCCTTGAGTGCTTCACTGGTGTTAATCAGTCAGAGATTGTAACTTCAGAACCCATGCTGACTAATAATTCAGTCAGACTATTGTATTTTTTAACTTCAATACCTCATCGAATAATCATTCTTTACTTTGTTATTCTTGCAGCTATGTCTTAGCACAATTAATAACAACTTGTACTGCGGTTTGGCAAGTTTGGTGTTTAGTCATATTAGGCCATTCTCTTCCTTATCAAAATTATCCTTCTCACCTGGAGACTGGGCCAATCCTATGTCAAGAGCAAAGTCACCTTATGTTCATCTTGGGCTGAAATGTAGCTTGAGAGCATGTTCATAGAAGTGATGAACATGTATGCATAGGTACCACATTCAAGGCTATCATTGTTACCTGGCCACCTCCTCCATGCCATTGACTTAGGTTTCATGGTGTGGAGCATGTAGAGTGCCCTGGGTGGGATTTGTTACAAAAGCCATCATTAGGCCATATTTGATCTCATCAAAGGGCAGCAATGGCAGCATTCAAGTGAATCATCAATCTTGTAACAGCCATATTGAGGAGCATTTGTGTCATATAGACAGCCACGTTTAGAGGCTTAAAACCTCCTTAAATCCTAGGAGAATCCTAGGGATGTACATAAATCCTCCCTATAAAAGGGGACATTTGAGATCAATGAAGATGGGAGGGATTCACACTTTCACTGTTCATCCATTTTGTACTTTAATAGGATTGCCTCATTGGCGTATTCTGACCTCTGCCACATTCCATGTTCACCCTTCTGAACCTTTTCTAAGGAATCTCTCAAATAACATGTCATGTTCTCATGAATGTTGTCATGTACTCTAGGTTTCGAGAGGCTACCAAGGGCTTCAACCATCACACTGAAGCGGTTTTACGACGAGCATTCGTCATCTTTGTCCTTCACATACGTGAATAGTGTCTATATGCTTACTGCTGTCTATGGCATTGACGCAAAACAAGGGACTAGGATGATATGTTCCCATGTCTCTTCTCTCCTTTTGAGTATTGGATAATAAAGTTTTGATCCATAATCAGATTTCAAATAGCTACCATCCATAACTCAGATGCATTCCTTTATTGTTAACCTGGACATAAAGGAAAATTCTGGATGTGGACAAGGTGTAGATGTAGCACTCAAAGTTGAGAATTACAGCTGTGGTTGTCAACTGCGGTTGACATCAACATTGAGGGCCTGTTTAGTTCCCACCCCAAAATTTTACACCCTGTCACATCGAAAGTTTGAACACCTGCATGAAGTATTAAATATAGGCTAAAAAAATAACTAATTGCACAGATTGTGACTAATTTGTGAGACGAATCTTTTAAGCATAATTGCTCCATGATTTGACAATGTGGTGCTACAGTAAACATTTGCTAATAACGGATTAATTAGGCTTAATAAATTCGTCTCGCGGTTTACTGACGGATTCTATAATTAGTTTTTTCATTAGTGCCCAAACACCCCATTCCGATGTGATATGCCAAAACTTTACACTCCTGGATCTAAACACCCCCTGAAACAGTAGTGTGGATGGTGGTGCAGTGGTTGTGTAGGGAGTAGGGACTAGGGAAAGACTCAGGCAGACAGGATCATGGCCGGCTATGATGTGGGAAGAAAATATGATAAGCAATATAAGTTGTATCCAACTTGCTACCTGTATCTAGTTCTTATCTTTTGGAATTTCTTTCAAATCTTGTGTCCTTTAGATGCCATTTCCACTACATGAGCCAGTTATCATTGTGAATCAAGCAAGATCAGTGAAGTAGTTTCTCTGTTTTAAATATCACCCCACCCTAGGGTTTCTCTCCTAAAGCCCTCCAATTCAGGCCTGATGTCATTCCTTCCTCAATATAGTTATTACCTGTGATAATTTAAGGAGCTAGTAATAAGACATTTTTGTAGTATTGCGTGGCAACCTATCTGTGCGAACCTAACAAGTTTAATAAATTGTGAGGTACATATGCTTGAGAGCAAGTATTTATCCTCTATTGGAGAAGATTTAAATCCTTGTTATTAAGCACGATGTCCATATATGTGCTTCCTTTAACACGAAACTGCTGGACATGCATATGATGTCTGTCATGCTCTGCTGTTTACTTCAGTGTAGATCAAATAATTATGTTTAATTCAACATGGGTTCCTTGCTTGTACCAGGTGGGCAATGCTGCTGTTGTTGTTGATCCATCAACCATGCAGATTATTGCAAAGGCTACAGACCAAACGCTCCAACATGATAGTTTAAAAAGTAACAAATGTGCTGAATTGAATTCAGACAGCCCCTTCTCATCACTTGAAGTAACTGAGAAGAAAGGGAGCAGGTTGTTCCTGTCAAACTCCAATGTTTCTAAATGCAACAGCCTGAATATGGAAGCCTCATGTTTAAACCCTTGGGGATGGATGAAACCAAGGCCGTCTGAGCAGAAGTCATTGCCCTGTGAAGGTGGTTTTCCATGGCACCCTCTGAGACATGCTGCCATAGTTGCGATTGAAAATGCTGCGGAGAGGGATAAAGTGATGTTCCCTTCAATTATATCATCAACCAAACCAAATTCAGATGGAAATATGGAGTATTATTCTGTTAATGAATCAGCAAAACGACTAAAGGTGGATAGAAATGTGAGCTTTGTTACTCCTATTTTCTACCTTTTCAATGTTGCCTTTATCAGTATTGTTTCTCCTCGTTTTGGCTAAAGTCAGAATTGAACTTCAGGACGACAAAAAAATTGCACATGAAGCAATCTGCGATGACTTGTCAGAAACCAGACCATACCTTTGTACAGGATTTGACATTTACCTAGTCTGGGAACCTTGCTCAATGTAAGTTATTACTGAAGTATGGCATCATGCTTTTGCTTTCTGTTCAGTTGCTCACATATTTCTTGTTCTTATCGAAGGTGTGCGATGGCACTTGTACATCAAAGATTCAAACGTATCTTCTATGCTTTCCCAAATCCAATTACTGGAGCACTGGGCAGTGTCTACAGATTGCACGGGGAGAAAAGTTTAAATCATCGTTACTCTGTATTTAGGGTAAAAGTGCCCGAGTCATATTCGAATAGTTCGGGCGATTGTTCTGACAAATGCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030198