Os06g0244700

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Revision as of 09:12, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0244700| Description = Armadillo-like helical domain containing protein| Version = NM_001063810.1 GI:115467351 GeneID:4340634| Length = 499...")
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Gene Name

Os06g0244700

Description

Armadillo-like helical domain containing protein

Version

NM_001063810.1 GI:115467351 GeneID:4340634

Length

4996 bp

Definition

Oryza sativa Japonica Group Os06g0244700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:7529955..7534950

Sequence Coding Region

7529955..7530737,7530850..7530979,7531282..7531829,7532666..7533048,7534854..7534950

Expression

GEO Profiles:Os06g0244700

Genome Context

<gbrowseImage1> name=NC_008399:7529955..7534950 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:7529955..7534950 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggccccgcgccgaaggcggagcccatgaagcagcgggtgaaccggtgcctgctccggctgtccgaccgcgacacggaggccatggcggccgccgagctggacgggatcgcgcgcgggctggaggccgacgagctccctgcgttcctcgccgcggtgtccgacgcgcgccccaccgacaggacgccgctgcggcggcactcgctccggctgctggcgctcctcgccgccgcgcacccgcgcgacgccgtggcgccgctcgtccccaggctcgtggccgccgcgctgcggcgcgtcagggacccggactcgtccgtgcgcgccgcgctcgtcgacgccgcgcgggccgccgcggcggccgcggcggcggcggacgcggcgctcgcgccgctcgtcggggcgctgctccacgagcaggaccagtgcgcgcagctcgcctccgcgctcgcggcggccgcggccgtcgaggcgtccgcccccagcgcggacctcgccgcctacctccaggccctcctcccgcgcctcctcaagcttctccgcagctccgcgttcaaggccaagccggcgctcatctccctcatcggcgccgcctcggccgcctccggcggcggcgccgcggccaccgcggtgccctcgctacgcgacgcgctcaccggcgaagactgggcggcgaggaaggccgccgccgaggcgctcgcgctgttggcgctggagcacggagacaacctcgtcgaacagaagccatcctgcattgccgtcttcgaggccaagagattcgataaggtgaagattgttcgggagtcgatgaaccggatgattgaggcgtggaaggagatcccagacatggacgaggaagtatgctcctccgacgtgccgccatctccgcagtcgcagacgagatcttctagcacagactctgcaagtgatggacgatacccagctgattcccttggctccaactctgtccagtcagttaggaggaggaacttatcaccgacaaaaaaatcacccccaagggaagcattgcacaatgtcagcaacagaaggaccagcagttcttccatcggaaacaagaagaactcaccgccgtcacgccacaattcaggccaagccaagaactttgagtgtaaggttaatgtgactgatgctccggatgcgaccccgatcaaaaccgtgaccgaggagaagcttctgaaagatggcaatgttagagcaaggcttgaggcgcggagggtactgttccagaagaatggtgaggagaggtacaacaaggttcctgggctcaagtcagggtctagagttgttccatacaatggggacgatgactcggaagagattgcggagtctgaggatgtgcatgaggagtttcagtcaggtcacaaggaagaggacctgtcaaagatcaggatgcagcttgttcagattgagaatcagcagaccagcttgctcaatcttctccagaaatttatggggagctctcagaatgggatccgttccttggagacacgggtgaacggactggagatggcactggatgagatctcccgtgatttggctgcttcttcaggaaggatgccaagcagtgaacctgatatgaactgctgcatccttagcccgaaattctggagaagacatgatggcagtagatactcatccaagtactccatctccgacatagcaaactactccgaggagagcagaacttcttacaagtgggagaggcagaagtttggagttcagggtgttgtcaccaacccattagcagagccaaacgcttcattcgcaggaaacacggttgttgctcaggaagccaggagacagaattcagctcaatataagtcaaggaggtggtgccatggtgaccacccgagggctgcgaggacagcgagtagcgggaggcaatggatgacatcttcgcacttctgcaaatccgcgctatga</cdnaseq>

Protein Sequence

<aaseq>MGPAPKAEPMKQRVNRCLLRLSDRDTEAMAAAELDGIARGLEAD ELPAFLAAVSDARPTDRTPLRRHSLRLLALLAAAHPRDAVAPLVPRLVAAALRRVRDP DSSVRAALVDAARAAAAAAAAADAALAPLVGALLHEQDQCAQLASALAAAAAVEASAP SADLAAYLQALLPRLLKLLRSSAFKAKPALISLIGAASAASGGGAAATAVPSLRDALT GEDWAARKAAAEALALLALEHGDNLVEQKPSCIAVFEAKRFDKVKIVRESMNRMIEAW KEIPDMDEEVCSSDVPPSPQSQTRSSSTDSASDGRYPADSLGSNSVQSVRRRNLSPTK KSPPREALHNVSNRRTSSSSIGNKKNSPPSRHNSGQAKNFECKVNVTDAPDATPIKTV TEEKLLKDGNVRARLEARRVLFQKNGEERYNKVPGLKSGSRVVPYNGDDDSEEIAESE DVHEEFQSGHKEEDLSKIRMQLVQIENQQTSLLNLLQKFMGSSQNGIRSLETRVNGLE MALDEISRDLAASSGRMPSSEPDMNCCILSPKFWRRHDGSRYSSKYSISDIANYSEES RTSYKWERQKFGVQGVVTNPLAEPNASFAGNTVVAQEARRQNSAQYKSRRWCHGDHPR AARTASSGRQWMTSSHFCKSAL</aaseq>

Gene Sequence

<dnaseqindica>1..783#896..1025#1328..1875#2712..3094#4900..4996#atgggccccgcgccgaaggcggagcccatgaagcagcgggtgaaccggtgcctgctccggctgtccgaccgcgacacggaggccatggcggccgccgagctggacgggatcgcgcgcgggctggaggccgacgagctccctgcgttcctcgccgcggtgtccgacgcgcgccccaccgacaggacgccgctgcggcggcactcgctccggctgctggcgctcctcgccgccgcgcacccgcgcgacgccgtggcgccgctcgtccccaggctcgtggccgccgcgctgcggcgcgtcagggacccggactcgtccgtgcgcgccgcgctcgtcgacgccgcgcgggccgccgcggcggccgcggcggcggcggacgcggcgctcgcgccgctcgtcggggcgctgctccacgagcaggaccagtgcgcgcagctcgcctccgcgctcgcggcggccgcggccgtcgaggcgtccgcccccagcgcggacctcgccgcctacctccaggccctcctcccgcgcctcctcaagcttctccgcagctccgcgttcaaggccaagccggcgctcatctccctcatcggcgccgcctcggccgcctccggcggcggcgccgcggccaccgcggtgccctcgctacgcgacgcgctcaccggcgaagactgggcggcgaggaaggccgccgccgaggcgctcgcgctgttggcgctggagcacggagacaacctcgtcgaacagaagccatcctgcattgccgtcttcgaggccaagagattcgataaggtcgaattcttgtagcaaacctgggatcttggcaatgacattctggatttttactttcgtggatctgcttgtttgttgaaattttttttaacatttttttttggcaatgcaggtgaagattgttcgggagtcgatgaaccggatgattgaggcgtggaaggagatcccagacatggacgaggaagtatgctcctccgacgtgccgccatctccgcagtcgcagacgagatcttctagcacaggtaatgtggctgttcttgaagcagtggccactgctctttcttttgggtgatttgggtaaatttatgtctaattgtctactgtttgtaaccttagttgaatatgaacttgtttgtggtaaaaaaaaacatatatggactgggttcagtaaaacacaaggcagaaggattctttgttggatatgtgtgacagttcttttgcttgtttgcattatattgtggatttcttggactaactgctgtcgattaaaggcggtaaaacgataaatgtgtgtatctgacactatgattatgtaatcaaacagactctgcaagtgatggacgatacccagctgattcccttggctccaactctgtccagtcagttaggaggaggaacttatcaccgacaaaaaaatcacccccaagggaagcattgcacaatgtcagcaacagaaggaccagcagttcttccatcggaaacaagaagaactcaccgccgtcacgccacaattcaggccaagccaagaactttgagtgtaaggttaatgtgactgatgctccggatgcgaccccgatcaaaaccgtgaccgaggagaagcttctgaaagatggcaatgttagagcaaggcttgaggcgcggagggtactgttccagaagaatggtgaggagaggtacaacaaggttcctgggctcaagtcagggtctagagttgttccatacaatggggacgatgactcggaagagattgcggagtctgaggatgtgcatgaggagtttcagtcaggtcacaaggaagaggacctgtcaaagatcaggatgcagcttgttcagattgagaatcagcagaccagcttgctcaatcttctccaggtaattttcccttgccgtgtggcatgttgtcaatgaagaacccagttgaactcttgatttttcacattgacattttgtgtttgatcggtaccattaccccaggattgcccataggtatgcgtgattgcacaggatatatgtatgcatgttcaattggatagaaaaatctaaaccaaagatttgaaaacctaataacaaaaaataaatttagtctatgcatcccttagtttttcaaaaacgcgtcatactaaatgtgatttggttcattatggagtatggactagtgtgcatttatggaagccttatctagcattcatgaaatcaggatagcttataatggaggtggcatacggcttatgttatcggtgacacaaacaagttattattcggtctcattgtgcagtattgaccattggtataaatcaaagatccattcactgtatcttgataatactctgacactatatatccattgaatgtgtcttgataataccagtccggatcactgtacatgagcaatggtcatggcatggggagaacttggacagcaacacgtcatttactggctgtctgacaatttcttgatcggcaactctgtaaccatatattgttgtttttcacccaaaccagaaaagaaatcaggattttgtgaaatttttgtgtgtgtgtaatgcatcaggaatgattatgtggaaagctatatataagaaataacccatagttttgaaatattactacatcactccctgtttgctgaaaacatgtctagcatgaacttatctcatcttgctcataagaaactgagtatgtctgacattatgattgcctgtgctcagaaatttatggggagctctcagaatgggatccgttccttggagacacgggtgaacggactggagatggcactggatgagatctcccgtgatttggctgcttcttcaggaaggatgccaagcagtgaacctgatatgaactgctgcatccttagcccgaaattctggagaagacatgatggcagtagatactcatccaagtactccatctccgacatagcaaactactccgaggagagcagaacttcttacaagtgggagaggcagaagtttggagttcagggtgttgtcaccaacccattagcagagccaaacgcttcattcgcaggaaacacggttgttgctcaggaagccaggagacagaattcagctcaatataagtcaaggtaggttaactcactcaagcgcaaaatcatctcactttctgtaagtcagtattatgcaattagatttggtaggtaggccaacaagatgtgatcaggacacctcagaaactgatagtaacataccaacataaaagtagtcactttcttgaatagaatatcatctggttcaatttatgctgtagttcccctattatgaaatgcatttttgctgaatctgcattcctattatgacagggcttccttcttgtttcgcgcccaccttcatttattattataaaatttgttaggttgtccaacatggttacttctttcaattgattggcaatttatactttctattccattttcttcaggatgggttagagtcgacaaaggctactgcgtgaagttttcgacgatatgaacaaagcatggtgcagctgcaagatcctacctttgctgcattttcaagctcttttcttcttttctccaagttgaaaaaaaacagagatgtacatgagatatgaagttctgtttgagttcagactcgtgagaaacagcctaaagccctagactctaaagcaagaccctctctgcgagcttggcattccatttgtgttatacaccaggccttgagattgagacaaccagttagctaatgcaggcttgctgagggcaaagcatatgtagagtttaaaatgagaaatcgagttcacagcaactatccttgcaaggatactcagccatggttcccatgaatgtatcttgttactgcttgtacataatttggatatggtaattccgatgccggtgagacgacttgaaacaaaatttttgttcagtacgatgagatcatgagggaaaagatccattgtggctcaaacggcataatgaaaaagcttcactgcctgccagcactgggattctaggaaggtcttatatgattcttcctctttgggaaaattggttttgtgcgatctcgaatttagaagtacatatatcacctaaagttgatagtatattttttactaaattgcgcttatggtatgtgaacttaagtgatgagtataaatagatacaacaacttatggattgttcatttcggcataacaatttgggtacgtagtttgtgcgaacctggacaatccaagcaaacaaattgatctaacatggggcataaactttatgccatggcaacttacacctatgaccttgtttaagagatcttattttgaatctgaagaaaagagaaattagttgcgcaaaagtttattttcatgttcaggacatacaatttattcatattttcatgtcttgggggaattttggccttctatataagtcaaaacaatgtttatttttatgttaagaaccaagagaattatttgtcatgccttagtaggaataactattgtaaaattcatttttaatttttttgttcaggcactctattttcatcgaaagtttgtttgaaaagttaatttttatggccgggcatctttaattcttttgcttttgtgttagtctaaatcttgaaaatatccctcaaataatagttacacgttttgtccatctaaaatttgatgtgcaataataattatacattagtgtgtgccacgttatattaattttgcttgtctcgatcattttggaccagcttcgcacagactagtcaagttaatgcactgaattgaccaatttataagttttctttacctatttgtacccactatacaagttcaagcataatttactctatattttaatactactaaaaggggttgtaatatttttttaatataattaagttcattttaatactgcaggaggtggtgccatggtgaccacccgagggctgcgaggacagcgagtagcgggaggcaatggatgacatcttcgcacttctgcaaatccgcgctatga</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0244700, RefSeq:Os06g0244700