BGIOSGA030230

From RiceWiki
Revision as of 17:22, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA030230

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA030230, complete gene.

LocusTag

OS09G0114700

Ensembl Transcript ID

BGIOSGA030230-TA

Ensembl Protein ID

BGIOSGA030230-PA

Length

3928

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:875953..879880

Sequence Coding Region

879684..879880,878797..879097),complement(878406..878528,875953..876249

Genome Context

<gbrowseImage1> name=IndicaChromosome09:875953..879880 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:875953..879880 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTTCGTGCGACGGCAACGGCGGCGGCCTCGGCAGCTTCGTGTGGAGTTATCACGGCGGGGATGAGGGGATTATGGTGCTAATGTGTAGCGCGCTGCTGCGCCTGGAGCCTAGGCGACCGATTTTGGTCGTCTGGCTCAGGCTAATTCCGCGCCTGAGTTACATCAGGCCAGGCGAGGTGGAAGGAGCCTTAGGAAAAAATGGTGTGAGGCAGGCGGACCCAAAAGTGAGGCATGGCGCTGCATTTGATAGCAGAGGCATGAGTTCCGGAGGTGGGGGTTCTCTTTCGGTTACCCTATTTGGGTTGTCGAGTTTTGGAGTTTGGAGGGGTGAAGAGGAAACTTTCCGTTTTAGGCGCCGTCTTCCTCCGCTCTTTGCAATGCCCCGGCAGCGTCCCAAGAAGGGGGAGCGCCGGATCGACGCCGCCATCGACCACTTCACCCCCATGGGCTACGCCACCGCCGACGTCCGTGCCGTCGTCAAGAAACTCCTCCAGGTGTACGGGGGGAACGACGGGTGGCCGTTCCTGGAGGAAGACTCGTACCGCGTCGTGCAGGAGGCGCTCTTCGAGAAGCAGGAGCAGGAGGATCACCAACAGCAGCCTCACCCTCATCCACAGCAATTGGAGGAGGCACCATTGGAAGACAAGAGCATGTCAATCATAGAGGTGCACAATGTGATGCCTGCTGAGACTGAACAACAAGTCGAGGACGCGGACCCCATGCTTGTTGACCTGCCTGCAGTTGAAGCAACTCTGCCCCTTCCTGAAGCCAAAGTAACATATGGCGCAAGGAGGCCCTGTTATGGGTGGATCGAAGAGTACGAAAGTGAATCCGATAACGAGGAACAGCCTGCCAGATTGATTTGTAAGAGGAAGCGTCCGAGTAGATGGGATGTTAAACCCATCAACTGGTGA</cdnaseq>

Protein Sequence

<aaseq>MASCDGNGGGLGSFVWSYHGGDEGIMVLMCSALLRLEPRRPILVVWLRLIPRLSYIRPGEVEGALGKNGVRQADPKVRHGAAFDSRGMSSGGGGSLSVTLFGLSSFGVWRGEEETFRFRRRLPPLFAMPRQRPKKGERRIDAAIDHFTPMGYATADVRAVVKKLLQVYGGNDGWPFLEEDSYRVVQEALFEKQEQEDHQQQPHPHPQQLEEAPLEDKSMSIIEVHNVMPAETEQQVEDADPMLVDLPAVEATLPLPEAKVTYGARRPCYGWIEEYESESDNEEQPARLICKRKRPSRWDVKPINW</aaseq>

Gene Sequence

<dnaseqindica>1..197#784..1084#1353..1475#3632..3928#ATGGCTTCGTGCGACGGCAACGGCGGCGGCCTCGGCAGCTTCGTGTGGAGTTATCACGGCGGGGATGAGGGGATTATGGTGCTAATGTGTAGCGCGCTGCTGCGCCTGGAGCCTAGGCGACCGATTTTGGTCGTCTGGCTCAGGCTAATTCCGCGCCTGAGTTACATCAGGCCAGGCGAGGTGGAAGGAGCCTTAGGGTAGCAACCAAACACTCACAAATTAGTCTTAGGCATGTCTCCAGCCAGGCAACTTGTTGTCAGGGCAGCAACCAAACAAGCTCTAAACTACTCAAGCAAAGCAAAAGTGGCAACATGATGCAATACAAGGATTACATGTGCAAATTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATACACCAACCAGCGCCAATGATGGTTGTGTGTGTTTACGTGGATAGATCAAAAACCACTTTTGTGCTAGGGGAAGAACTCGATTATCCGTGCACTTACGGATAAAAACAAAAAGCGTAAGGATCTTTTACATCAACCGATGGGTTGCACGGATAAAAACATAAAGCGTAAGGATCCTTTACACCAGCCGATAAGGTGCTAGCTTAGAGATGTGCATGTGTTGGAGGACCACAACCTCCTCTGGGATAAGGGTAGGAACAAATAGGAGATGAATGATTTAAGACTACCACCCCGTTCATACTCATAAAATAGAAAAAAATTGCCCCAAAAAGAAAAGAAAAGGCCCTTGTTCATTATGAAATTATTTATGACAGAAAAAATGGTGTGAGGCAGGCGGACCCAAAAGTGAGGCATGGCGCTGCATTTGATAGCAGAGGCATGAGTTCCGGAGGTGGGGGTTCTCTTTCGGTTACCCTATTTGGGTTGTCGAGTTTTGGAGTTTGGAGGGGTGAAGAGGAAACTTTCCGTTTTAGGCGCCGTCTTCCTCCGCTCTTTGCAATGCCCCGGCAGCGTCCCAAGAAGGGGGAGCGCCGGATCGACGCCGCCATCGACCACTTCACCCCCATGGGCTACGCCACCGCCGACGTCCGTGCCGTCGTCAAGAAACTCCTCCAGGTCGTCAGCTCAATCCCTCCTCCCTCCTGATCTCTCCGTCACCACAGGCCCGGGGTTTCTTTCCTCTTTTCTTTTTTTGTTCGATTGTTCTTGGGACCAAGAACCGCGGAAATGGGGATCAAAATTCCACATTTGCTGTGTTCTTGGAGGTGTCCAGATGCAACAAATTAAAGCTCGCGCCTTTCCTTGCTTCTAGGCCCTGTTGATCGATCGACAAGCTAGCTTAGCATTCTTGGTGATTTCTGTTCGTGTGTCGTGGTGTGAGCAGGTGTACGGGGGGAACGACGGGTGGCCGTTCCTGGAGGAAGACTCGTACCGCGTCGTGCAGGAGGCGCTCTTCGAGAAGCAGGAGCAGGAGGATCACCAACAGCAGCCTCACCCTCATCCACAGGTGCTGCTGCTGCTTTACTTCCTTCTACTATTCATCTCTCTCTTGATGATCATCCTATTCATTCATGTCCTCTATTTCCACTTCTGGCTGTCAACTATTTTTATATTTGCTACTACTTACGACTACCAAAGAATTTCTTCTTTTTTAATACATTACAATGTCCGCGTATTCATCAATACATATATGCAACAATCCACATTCATCAGAAAACTTTATTTTTCTGCTCTACCAATAGTAACATTATATCCAGCAAGTTCATCTTCAATTCTTAACATTATCCAACTATTCCTGTTCTAAAAAACCGGTATATCCTGTTGCAATTTCTGAAAAAAAAAAGGCAAGGGGAATCCAACCTAATTAGTGCTTTGCACCCAAATTTCCAATAATATATAGGTGGTTTTACACCTTGTTCTAAATCGGTTTTGTTTAGTAGTTTTGATGGTAACAGTAATACTATGACATGGGCACAATGTATCCGTTTGATTCAAGGGTTGATTAGATCCATGCCATTATAAATATGTCGATTCAGAAAAATGCCATGACCACTATGATCCTACAGCCACTACAATTTATCTATTCATAGTTGTGCTACCGAAATTCTACAAAATTGGAACTGTACAATCGCTGTCACGTTTTCCATCCATCTCTTCCTTTTTTTTTTTCCCGTTTTCTTTCCTTCTTTCTCCCATCGTCTTCCCGCACCGATGAGTGGCGGGACCGGTAAGCGACAGGGTGTGAGGCGGGACCGCAGCAGGGCATGAGGCGGCAAGGGCGGATATAGTCATAGGTGATGCAGCAGTCCCACTCCTTGGCACGCTCGAGCATGGTGGCGACGAACTCGGTATGCAGCTTCACGTCGAAGAGGGAGCCGAAGTAGATGAGCGCAAGTAGATCCTCAACAGAGGAATTAGCGCCGGAGGAGGAAGGAAGGCGCGACGGTGGATGGGGAAGGGGCGGGGTGGGAGGAGAGCTCCTCGGCGAGTGCGGCGGCGAGCGGGGTGCGCATCCACTCGTCAATGAGCATGATGACAACGGGCTTGGATCAGAGCACCTCCTCATGCTCCTTGTTCAGCTTCCTCCCGTTGGTGAGCGATTCCTCCATTTGGAGGATCTTTTTGTGCTTCTTCCACAGTGCGTGGAGCCGTTTTGAGACAACACTAAGGATTGGCCCGTCGATGGCCTCAGTCGCCGCAGCCACCACGGCAGGGGCCGAGGAGGAGCTGGTGGAAGAGGTAGCCATGGGTAGGGTTTTGGGATTTGAGCTTGGAGATGGAACGACGAGGGTAGGGAAGAAGGGCAATCGGCTGAGGCCATGGGGTCCACGCGGAGCTCCATCGCCGGTGGTGTCGCCTCGCCTCAACTCCATCCAGATCTGGTGAGAGGGATAGATTCTCTCCTACCCTTTCCCCTTCCCTTTTTGCCACCGCCACCACCGAACCGCCGAGGTCCCGCCGTCGCTCGTAGGTCCCACCGCCACTCGCGGCTCGTCAGTGCAGGAAGAAGACGGGAGAACGAAGGAAGAAAATGGAAAATAAGAAGAGATGGATGTAAAACGTGAAGGCAGTGGCACCGTTCCAAATTTGTAAAATTTCAGTGGCACGGCTACGACTAGATGAATTGTAGTGGTATTTTTCTGAATCAACATATTTGTAGTGGCATGGATCCAATTAACCCTTGATTCAATCATTATTACAGTGACCAAGTTTTAGTAGATGATTTGAGGTCTCCTAGTTATTGAACATCATGAATTTCACTTCGAATTCTGGGCCTCGATGAGCTTGATCTGTATTTTTTTTAAAAAAAAAATTGCTTCATAGCTGCACCTGCTGCTGCCATTTTTTTGTTCTCAGAACATGCCCCTTTCTCTGTTGCAACTTGCAAACATAGATCGTTCAGGCTCTTCATTTTCCAGACCCACCCTTAGTTTTTCAGTCACCCACTTCTGCCAAAGACATCTAGTTCTCAGTGTGAAGTGCCTTATTTGATAATTTGAGAACTAATCATTACGATTTGATATGACGTTCTTCCAGTTCGAATTAGGTGCTGATACAACTCGATTTGTAGCTCTAGACTGAAAATTGCTTGTTCCACGGTTTCTGAAAATTACAATCAATGCGTAGTGTGCAATTATTAAATGGTATTGGCGTGTAATGCAGCAATTGGAGGAGGCACCATTGGAAGACAAGAGCATGTCAATCATAGAGGTGCACAATGTGATGCCTGCTGAGACTGAACAACAAGTCGAGGACGCGGACCCCATGCTTGTTGACCTGCCTGCAGTTGAAGCAACTCTGCCCCTTCCTGAAGCCAAAGTAACATATGGCGCAAGGAGGCCCTGTTATGGGTGGATCGAAGAGTACGAAAGTGAATCCGATAACGAGGAACAGCCTGCCAGATTGATTTGTAAGAGGAAGCGTCCGAGTAGATGGGATGTTAAACCCATCAACTGGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030230