Os06g0245600

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Revision as of 09:12, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0245600| Description = ab initio prediction with EST support| Version = NM_001063811.1 GI:115467353 GeneID:4340635| Length = 2784 bp| Defi...")
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Gene Name

Os06g0245600

Description

ab initio prediction with EST support

Version

NM_001063811.1 GI:115467353 GeneID:4340635

Length

2784 bp

Definition

Oryza sativa Japonica Group Os06g0245600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:7554464..7557247

Sequence Coding Region

7554464..7554645,7555188..7555316,7555387..7555420,7555531..7555763,7556710..7556771
,7556888..7556945,7557040..7557106,7557200..7557247

Expression

GEO Profiles:Os06g0245600

Genome Context

<gbrowseImage1> name=NC_008399:7554464..7557247 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:7554464..7557247 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagcagctcaacgccaagctctaccacaggtacaccgccctcaagaagcggaagctgctcgacgaggggctggaccagaagcgggctgccgacatcaacgagctccgccaagccatgaaagattgggtggccgagctccagagcgagaacgagcgcctcgttgccaagctgacccaaaaggagcagcagcttgtggaggcacagacgcttttacttgatgagactcggaagacaaaggagctcaatagtgaaatattgaaacttcagtgtctcctggctgagaagaatgatgcaaaccatattgcgacagggtctcctgacacaaccgccgaaatgactatagaaaatcaaactccaatttcacctgcaaagaagacgccaaagtcaaacagcagggagagaaatattcgctccattgaaaaagcgattgttcctcgtaatggctttcaggaggaaggaagagatcttgattcctgtagaagacatatgagcatctcagggagtgcgacagaagaaagttccagtacctgtatgtttcatctgctggctgaatcaatggttgggatgaaattttcagtgaagaacgaaacagaaggattttcactttcagtctcccatgaagctagtggttacaacttcactctcacatgggtagaccaacctggtggcagtgaatggtcatatcagtactcctcgttgggcaccctggacaggatagctatgggctggatgaaggaggacataaaattcagctcgaccatgtgtcctgtattcttcaagcagatatcgcacatcctcaggcaatgctaa</cdnaseq>

Protein Sequence

<aaseq>MEQLNAKLYHRYTALKKRKLLDEGLDQKRAADINELRQAMKDWV AELQSENERLVAKLTQKEQQLVEAQTLLLDETRKTKELNSEILKLQCLLAEKNDANHI ATGSPDTTAEMTIENQTPISPAKKTPKSNSRERNIRSIEKAIVPRNGFQEEGRDLDSC RRHMSISGSATEESSSTCMFHLLAESMVGMKFSVKNETEGFSLSVSHEASGYNFTLTW VDQPGGSEWSYQYSSLGTLDRIAMGWMKEDIKFSSTMCPVFFKQISHILRQC</aaseq>

Gene Sequence

<dnaseqindica>2603..2784#1932..2060#1828..1861#1485..1717#477..538#303..360#142..208#1..48#atggagcagctcaacgccaagctctaccacaggtacaccgccctcaaggtatatacatactgccactgatctacgacatggacacggatttcctcttaatcgtttcgtgctcgtgtgctgccgctttttggatgcgcgcagaagcggaagctgctcgacgaggggctggaccagaagcgggctgccgacatcaacgagctccgccaaggtaaaccgacgggaagagaaagacttatggaattgggagaaatttctgttaggttcacaatttggctccgttttcgttgtttctgatgatgcagccatgaaagattgggtggccgagctccagagcgagaacgagcgcctcgttgccaagctgtaagattgcaaaatgctgctcctgcggcgatagggtttcacgcgttcgtgctgttttgggggaaatgatgcctgatctattgctttctcttcttttgttaatttcttgatgccaggacccaaaaggagcagcagcttgtggaggcacagacgcttttacttgatgagactcggaagagtaagaattctttttttttttacttaaactataattttaagaaaaatgtttagtagcatgcaagtataaaccatgcttgtttggaggtggaactggtgtgcgtctttgggaacaaagggaaataatctgttgctgattgaaagcactatgtggttggcacatactgatacctcttaaatatgtgcttatcttcaattatgatctgcattggaggcaactcacatatatctaacttattcaacccttgcaagtaagcagcttcccagttgtgacctaaccatttcttttccagtggtgcaagaaaaactgatttgcacgaattcaaaagaactattgcttgatctatgtgggagattttctttacatcttacttggttggtcagcatagttctagaaaatagccaccagaagttttgatcccctttaaatgtgatgtttacactaaatagattagcaagaagcaaacacatgatatgaagtattggttaattaagttgcacaaaaacagtgactgctatcggcagacatcattagcagagttggaggatggaaccggatttttgaaatctgatcatgggagctgtggattcgcttgctagtgatgacataagtggtgctccgcgttgccaagatgcagcttgctttgcagggagacccgggaagggatagtagtaatacacttttagttagtaatatgcttttcagctaaacatggtaatgcaagtcgtgactgagttttgtgttccctaactgatttttttttcttattatcatcttgcactcagtaaattcatcaggttcaccatagtaaagtatcacccaaatatgaagtgaaccaggccttgtaaaattaaatttactctgtagatggtctgagttctgtcttccatattaatttggtattaatgaagttgacttaagttaattttgtttacaaaacatgcagcaaaggagctcaatagtgaaatattgaaacttcagtgtctcctggctgagaagaatgatgcaaaccatattgcgacagggtctcctgacacaaccgccgaaatgactatagaaaatcaaactccaatttcacctgcaaagaagacgccaaagtcaaacagcagggagagaaatattcgctccattgaaaaagcgattgttcctcgtaatggctttcaggaggaaggaagagatgtaagttttccgtaacagttgaactacctattagcaatgtacaagtatgcaagagaacgagtgtgttgagctcttctaatttctgtttatgatttggatcggttttgtagcttgattcctgtagaagacatatgagcatctcaggttagtggtaatatacacacagttacatgcagtagtggattgttttaacttaaaagtatgttgtttgcagggagtgcgacagaagaaagttccagtacctgtatgtttcatctgctggctgaatcaatggttgggatgaaattttcagtgaagaacgaaacagaaggattttcactttcagtctcccatgaagctagtggtatttgtaacatcaaatttcatgctatcgttttagccacagcatagtactggaatatcacatcatagtttttattcatcatgtttaacttgtgttcatctctttcacattcatttgattttgcatatagctccctccatgtttgccaagcaagctgagtattcaagcaaacagttttggaaagaacaatctttcaacctgaaaaaaaaaatccttttaaccaccagaagagttgtgtgaatacatattctaatgctttaatatctttgtcaagaatgacgcatatctctctgtagagtgcgtgtacacatctctttggagctcagccgtttgtagcagaactcgtattgtataccagcatacagtgtacttacatgttacatgtttgggtgcataacctgagggtcatgtcaccaatgttttcagttcaggatttataacttcgatcccttttaccatactgttagaacatttgatttgtaaatatcatatcacgtgtaaggaaccaattacattttctaactgaattgttcaaattgtaggttacaacttcactctcacatgggtagaccaacctggtggcagtgaatggtcatatcagtactcctcgttgggcaccctggacaggatagctatgggctggatgaaggaggacataaaattcagctcgaccatgtgtcctgtattcttcaagcagatatcgcacatcctcaggcaatgctaa</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0245600, RefSeq:Os06g0245600