BGIOSGA030295

From RiceWiki
Revision as of 17:22, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA030295

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA030295, complete gene.

LocusTag

OJ1734_E04.14

Ensembl Transcript ID

BGIOSGA030295-TA

Ensembl Protein ID

BGIOSGA030295-PA

Length

1101

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:1102709..1103809

Sequence Coding Region

1102709..1103809

Genome Context

<gbrowseImage1> name=IndicaChromosome09:1102709..1103809 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:1102709..1103809 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTGCCCAGCATGATATGGTGTCAAAGTTTGGTGCTGCTGCCATTGTGGTTATGCTCATGCTTGTCGTCCCTAACAGCGGCAGCGGCGAAGATGCAGGGCATGACAAGGATCAATTGGCTCCTATGTCAAGCGAAGCAGAATTTGGATTTTCTCTCCCAATTGTTCACGGGCGTCCACCGGCACCCGGTATGGATGACGAGAAGTTTGTGACTCCATTTAGAATTTATGAGGATGTTGCCTATCTTGCTGAAATGGAGATTGGTGAGCGGCAACAGAAGCAATACCTCCTGATCGACACAGGCAGCTCTTTGGTCTGGACACAGTGCGACGAATGCCCGCATTGTCACATTGGCGATGTGCCACCATATGGAAGATCCCAATCTCGAACATTCCAGGAAGTGAGCTGTGGTGATGATGATGACAATGATAAAGAAGAAGCAATTGCTAGTTACTGTCCAGCAAAACCGCCGGGATATATCACTTTGTGCGTCAATGGGAGGTGTATGTTCAAGGCGCTATATAATTTGACCGGGCAAGGCGAGACTGTTCAAGGGTACATGTCAATGGATACATTTCACTTCATTGATGACAGGAGATTTGACTACCAAGCTAAGTTCCGGATGGTTTTTGGGTGTGCACACCAAGAGAATATCGTTCTTACAGCTGTCAAGGAATGCACTACAGCTGTCAAGGAATGCACTGGCATATTGGGATTAGGTATGGGCGATGCATCGTTTTTGAGGCAGACCGGAATAACTAAGTTCTCGTACTGTGCTCCACCTCGGATGCCAGGTTACTCATATAGGAGAGACAGTTGGCTCCGTTTTGGCTCACATGCACAGATTTCGGGGAAGAAGGTTCCACTGGTGATGCGGTGGGGTAAGTACTATTTGCCGCTAACAGCCATCACTTACACATACAATGAGCTTATGTCTCCTGTGCCTATTATTGCCTATAAGAGCCAAGAAGACTATCTACACATGATGGTAGATACAGGAACCTCCTTGCTAAGTCTCCCGACCTCTTTGCACGATGATCTGATCAAAGAAATGGAGGCAATAATTAAGTCAAAAAAATATGATGGAAGGGGCCACTAG</cdnaseq>

Protein Sequence

<aaseq>MAAQHDMVSKFGAAAIVVMLMLVVPNSGSGEDAGHDKDQLAPMSSEAEFGFSLPIVHGRPPAPGMDDEKFVTPFRIYEDVAYLAEMEIGERQQKQYLLIDTGSSLVWTQCDECPHCHIGDVPPYGRSQSRTFQEVSCGDDDDNDKEEAIASYCPAKPPGYITLCVNGRCMFKALYNLTGQGETVQGYMSMDTFHFIDDRRFDYQAKFRMVFGCAHQENIVLTAVKECTTAVKECTGILGLGMGDASFLRQTGITKFSYCAPPRMPGYSYRRDSWLRFGSHAQISGKKVPLVMRWGKYYLPLTAITYTYNELMSPVPIIAYKSQEDYLHMMVDTGTSLLSLPTSLHDDLIKEMEAIIKSKKYDGRGH</aaseq>

Gene Sequence

<dnaseqindica>1..1101#ATGGCTGCCCAGCATGATATGGTGTCAAAGTTTGGTGCTGCTGCCATTGTGGTTATGCTCATGCTTGTCGTCCCTAACAGCGGCAGCGGCGAAGATGCAGGGCATGACAAGGATCAATTGGCTCCTATGTCAAGCGAAGCAGAATTTGGATTTTCTCTCCCAATTGTTCACGGGCGTCCACCGGCACCCGGTATGGATGACGAGAAGTTTGTGACTCCATTTAGAATTTATGAGGATGTTGCCTATCTTGCTGAAATGGAGATTGGTGAGCGGCAACAGAAGCAATACCTCCTGATCGACACAGGCAGCTCTTTGGTCTGGACACAGTGCGACGAATGCCCGCATTGTCACATTGGCGATGTGCCACCATATGGAAGATCCCAATCTCGAACATTCCAGGAAGTGAGCTGTGGTGATGATGATGACAATGATAAAGAAGAAGCAATTGCTAGTTACTGTCCAGCAAAACCGCCGGGATATATCACTTTGTGCGTCAATGGGAGGTGTATGTTCAAGGCGCTATATAATTTGACCGGGCAAGGCGAGACTGTTCAAGGGTACATGTCAATGGATACATTTCACTTCATTGATGACAGGAGATTTGACTACCAAGCTAAGTTCCGGATGGTTTTTGGGTGTGCACACCAAGAGAATATCGTTCTTACAGCTGTCAAGGAATGCACTACAGCTGTCAAGGAATGCACTGGCATATTGGGATTAGGTATGGGCGATGCATCGTTTTTGAGGCAGACCGGAATAACTAAGTTCTCGTACTGTGCTCCACCTCGGATGCCAGGTTACTCATATAGGAGAGACAGTTGGCTCCGTTTTGGCTCACATGCACAGATTTCGGGGAAGAAGGTTCCACTGGTGATGCGGTGGGGTAAGTACTATTTGCCGCTAACAGCCATCACTTACACATACAATGAGCTTATGTCTCCTGTGCCTATTATTGCCTATAAGAGCCAAGAAGACTATCTACACATGATGGTAGATACAGGAACCTCCTTGCTAAGTCTCCCGACCTCTTTGCACGATGATCTGATCAAAGAAATGGAGGCAATAATTAAGTCAAAAAAATATGATGGAAGGGGCCACTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030295