BGIOSGA030343

From RiceWiki
Revision as of 17:22, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA030343

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA030343, complete gene.

LocusTag

OsI_30505

Ensembl Transcript ID

BGIOSGA030343-TA

Ensembl Protein ID

BGIOSGA030343-PA

Length

3555

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:2886477..2890031

Sequence Coding Region

2886477..2886614,2887944..2888132,2889390..2890031

Genome Context

<gbrowseImage1> name=IndicaChromosome09:2886477..2890031 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:2886477..2890031 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGAGTTTCCTGCACCAGAGGCTGCTTGAATGTACTAAAGAAGGTTTATACTCTACTAATATGGTGCAAGGTCAGGAATGGTTTGCTTGTCGACACATCACTTGTACGAGACTTGACGAATCACTACAAAGTTTCTCTACAAGTATATCCAGATATGCTGGGATGGAGTGAGCATAATGGAAGAACAATAGGCCTTTATTTGATGGCTTTTAGCTTTAAGATGCTCAATGAGGAGGGCCAAGGAGATTTTGTTCTTTTATTTGCCATTGATTGGCCTTCGGTTGATATATCTGAGTTCATGTACTCCACAGGCACGAAAGAAAAGTTTCCCCCTATTTTTACTCTTCTTAAATATATATTATACGCCGGTGACGCCGACGGCACTATACCCATCCCGTGGTTGAACCTCAACGGCCAGTTCGGCGACATCGTGGACCGTGCCGACGGCTCGGACGTGCCGTTCTCTGTCGGCGGCGAGACGTTCCACGCACACCATGCCGTGCTCGCCGCGCGCTCGCCGGTGTTCAAGACGGAGCTCCTCGGGTCCATGGCGGAGTCCGCCATGCCGTGCGTCACCCTGCACAACATCGACCCGGCCACGTTCAAAGCTCTACTACACTTCGTGTACATGGACGCCTTGCTGTCGCCGACCGGAGGCGGTGCCAGCTCGACGTTGACGACAACCGGATTTTTCGAGAGCTTGCTCATGGCGGTGGACATGTACGCATTGAAGAGGTTGAAGCTGATGTGTGCACAGAAGCTGTGGGAGAGCGTGTCGGTGGAGACGGTGGCGATGACACTAGGCTACGCCGAGACGTACCATTGCCCGGAGCTAAAGAGCAAGTGCCTCAGCTTCTTGATGGCGGAGAGTAGCTTCAAGAAGGTGGCCTTCACTGATGGCTACTTTCATCTTAGGCGGGATTTCCCGTTAATTATCGAAGAGATAAAAAAGCGGATTGAGAGTTAA</cdnaseq>

Protein Sequence

<aaseq>MGVSCTRGCLNVLKKVYTLLIWCKVRNGLLVDTSLVRDLTNHYKVSLQVYPDMLGWSEHNGRTIGLYLMAFSFKMLNEEGQGDFVLLFAIDWPSVDISEFMYSTGTKEKFPPIFTLLKYILYAGDADGTIPIPWLNLNGQFGDIVDRADGSDVPFSVGGETFHAHHAVLAARSPVFKTELLGSMAESAMPCVTLHNIDPATFKALLHFVYMDALLSPTGGGASSTLTTTGFFESLLMAVDMYALKRLKLMCAQKLWESVSVETVAMTLGYAETYHCPELKSKCLSFLMAESSFKKVAFTDGYFHLRRDFPLIIEEIKKRIES</aaseq>

Gene Sequence

<dnaseqindica>1..138#1468..1656#2914..3555#ATGGGAGTTTCCTGCACCAGAGGCTGCTTGAATGTACTAAAGAAGGTTTATACTCTACTAATATGGTGCAAGGTCAGGAATGGTTTGCTTGTCGACACATCACTTGTACGAGACTTGACGAATCACTACAAAGTTTCTGTAAGATAGCAGATGTGCCGTTTTACCAGTTACACGTACACCAATGGGATAAAGATGAGTGTGGACATCATTACTATATTAATCTGAAGTATGAAAATAATAATGGATGTCACTACTACGTCAATCTGAAGTATGAAGATGATAACAAGGAGAAGGATACATAGAAAGGTGATAAATAAAGAGTCAATTGAAATGGAACAATAATCACCAGGATAGTTAGATCAAGTGTGGAGTTCTTTAATTCAAGATATTTTGGAACTGCACAAGCCATAAAATACTGTTGCAAAGTGGTTTGCATCGATGTTGGAATAAATGTCTTGTCAGTCTGTCTACAAGATTGATGGCAAACCTATACAAGAAGCTGCATTGGAAACTAGAATCAGAAAGGTTAAGGCGTCACCGTTACATGAAACAGTTCTACAATATTTGAGATACAGACTATAATTGTTTTTCACTGCAAAAGATGAAGGTCAGATGGAAGAAGATACTTTAGGATCCGCTATTAATTTAAAGTACTTTGAAGCTCAGATACTTCGTAGATATACTTAATGGATACGAGACTTGTTTCCATAAGACAGGAGGAAATAGTTTTACCACGAAAGGTGGGATTCGGTCGAATGTTAAATGTTATTTTTCTCAGAAAAGTGAAATCATGGGAACTAATTCAACTCCAGTGATGAGTGAGGTTTCTATGGACTTGATAGAGTCAAGGGTGCTCAGAGAAGGAGAAAGAGCAAACATTGTCGTATTCACACAAGTTTTTGTGCTTTGAGATCTTACAGCCAATATTCTAAATGTCGAGAGGATAATGTTTTCAATAAAATTGACCTGTCAATATCTGCAAGAAGATCAGGTTAGGCGTTATGTTCTATTGGAAGAAGCAAGAAGAGAATGTCAGATAATGGTATGTCAGTTTGACAGAGTGGTTAGTGAAGGATTACCCGACCCAGATTTCTTGCTAGCCGTTCCAAATCTCGGGACGAGATTTTTGTAAGGGGGGTGGATTTGTCACACCCTAAAAATCGCTAAATTATAAATTGTTGTGAAAAAGGAATTTTTAGAATTTATTTAATAATTAAAGTAAGTGTGTGAATAAAATCTATGAAAATTTTGAACATTAAGTTGATATAGATAAAATTGTATTAAATATTTTTAATGTCCAAGTATTTTCTGGATTTTTCCCAGAATTATTTGAGCATTGGAAGTATTTTTAATAAATGAAAGATCATTCAGTGATTAATTTAATTGGAAAAGTAATTAATAATTCTTCCCTGTTCACCCTCCCTCTCCCGGTTCAGTGATCATTCAGTGATAAAATTGTCTCTGCAGCTACAAGTATATCCAGATATGCTGGGATGGAGTGAGCATAATGGAAGAACAATAGGCCTTTATTTGATGGCTTTTAGCTTTAAGATGCTCAATGAGGAGGGCCAAGGAGATTTTGTTCTTTTATTTGCCATTGATTGGCCTTCGGTTGATATATCTGAGTTCATGTACTCCACAGGCACGAAAGAAAAGGTAATATCCATATATGCAGGATTATTTCTTTACTTTAGGTTTTTACTATTTTACTATGATTAGACAAGGATAAATGGATATATTTTATAGTATGAACCTATTAGATAAGCTCAGCTTAGTGTATGCAGAGGTACAAGCATGAAACAACTGATTCTGAATAGGAATTACTACTCCCCTTTTCTAGTCTACGAATTTGAGTGTGTACCTTTTCATTAGCAAGGCTTAAATGCTCTCAACTGGTAGTTGTTTATGAATTGATAGAATTTTGGTGATTTTTGGTGAAATATATTCTCCAAAGAGGTAAACCTTATTTTAGATAAAGAAGATATTTTATTTTGAAGCAGAAGATGTGCTATATCCCCAACCTCTGCGCCAGGGGCACGCGACACGACCAAAACACATTCCATGATGCTCTATAAGTCTATAACTACTACAACATACATAATTTCATTTTTATATCGAGCACTACTATAGCATACATAATTTTCATTTTTATATCAGCATTGATCTAGGATTATCCTGCCATTGCTCACAAGCTACTAATAGGTAGTCTTTTTATTTTCTTCTTTGCAAGAGGAGGCAACCTTAATATTATACCTGGTGGCACCTCTGACCACAGGTTTGGAGGATGGAATTAGGCACGATGTGATGCATATGACTTCAGTGGAGCAATTTTATCAGGATTGCAGGTTTGGAGGATGGCATTAGGCAAGGTGATGGACATGACTTAAGTGGAGCAAGTTAATCACGATTGTAAGCTTAGAGGACACCATTACTTAAGCATATTTCCCTGTCAGAATAATATTTGGCATTCACATGTTTGTACTTACAGATCGCTTGATCTCTCAGTTCTATATTTCCTCTGACAACTACATGACCATAGCTACATGTTGCTCAATGTTTTGATTTTCTGTGAGCAAATTAAAGTTATGAGTTCTTATAGCTCAAGTACTGAAAGTTTACAAATTAACCAATGGATGCAAGGTTTGTCTGAATTTAGTGTCTGACCTTGGCCCTTGCAGGTTGTGTAAACAATATACTCCTGTTACCATTTAAGGTTACGATTTATTCTCTACAAATTCATACTAAATTCATATTATACAAGTTCATGCTTAACAATTGATTTGGATTTCTAGGTATTTATAAAATCCAGATTATTTTGTGAACGTGAACATGGAATGTATCTAAATTCAGCGTGTGGACACAGCCATGCCATGTTTCTCAAGTCAGTTTATGAATATATTCTTGTGCACATAGTTTCCCCCTATTTTTACTCTTCTTAAATATATATTATACGCCGGTGACGCCGACGGCACTATACCCATCCCGTGGTTGAACCTCAACGGCCAGTTCGGCGACATCGTGGACCGTGCCGACGGCTCGGACGTGCCGTTCTCTGTCGGCGGCGAGACGTTCCACGCACACCATGCCGTGCTCGCCGCGCGCTCGCCGGTGTTCAAGACGGAGCTCCTCGGGTCCATGGCGGAGTCCGCCATGCCGTGCGTCACCCTGCACAACATCGACCCGGCCACGTTCAAAGCTCTACTACACTTCGTGTACATGGACGCCTTGCTGTCGCCGACCGGAGGCGGTGCCAGCTCGACGTTGACGACAACCGGATTTTTCGAGAGCTTGCTCATGGCGGTGGACATGTACGCATTGAAGAGGTTGAAGCTGATGTGTGCACAGAAGCTGTGGGAGAGCGTGTCGGTGGAGACGGTGGCGATGACACTAGGCTACGCCGAGACGTACCATTGCCCGGAGCTAAAGAGCAAGTGCCTCAGCTTCTTGATGGCGGAGAGTAGCTTCAAGAAGGTGGCCTTCACTGATGGCTACTTTCATCTTAGGCGGGATTTCCCGTTAATTATCGAAGAGATAAAAAAGCGGATTGAGAGTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030343