Os09g0133600

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Revision as of 07:17, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0133600| Description = PAP fibrillin family protein| Version = NM_001069166.2 GI:297609077 GeneID:4346460| Length = 3628 bp| Definition = ...")
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Gene Name

Os09g0133600

Description

PAP fibrillin family protein

Version

NM_001069166.2 GI:297609077 GeneID:4346460

Length

3628 bp

Definition

Oryza sativa Japonica Group Os09g0133600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:2495806..2499433

Sequence Coding Region

2495806..2495898,2496191..2496312,2497925..2498123,2498894..2499205

Expression

GEO Profiles:Os09g0133600

Genome Context

<gbrowseImage1> name=NC_008402:2495806..2499433 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:2495806..2499433 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gtcacctactactacacacagcgacagagaggagcagagccgcaagaagagtcgagtcatggcggggtcgtcgtccctcagcacgctctccctctgcgcgcgtccagcgagacgcgcgcggaggtggtcgagctcatcacgcagctcgaggcccgcaaccccacgccggcgcccaccgaggcgctcaccctcctcaacggcaagtggatcctcgcgtacacctcattttcacagctattcccactattggggtctggtagtttgcctcagcttgtcaaggtggaagaaatatcacaaactattgattctgagaacttcacggttcagaattgcatcaagttttcaggacctttagcaacaacttcagtgtctaccaatgccaaatttgaagttcgaagtcccaaacgtgtacagatcaaatttgatgaaggcattatcggcactccacaattgactgattctattgtactacctgagaagtttgagttatttgggcagaatattgacctgaccccattgaagggcatattttcatcaattgaaaatgcagcatcctcagttgctagaaccatctctggtcaacctccactaaagataccaattaggactgacaatgctgagtcttggttgctcacaacctaccttgatgatgagcttagaatctccagaggtgatggcagcagcatctttgtactgtttaaggaaggaagcaccctcctatattaa</cdnaseq>

Protein Sequence

<aaseq>VTYYYTQRQRGAEPQEESSHGGVVVPQHALPLRASSETRAEVVE LITQLEARNPTPAPTEALTLLNGKWILAYTSFSQLFPLLGSGSLPQLVKVEEISQTID SENFTVQNCIKFSGPLATTSVSTNAKFEVRSPKRVQIKFDEGIIGTPQLTDSIVLPEK FELFGQNIDLTPLKGIFSSIENAASSVARTISGQPPLKIPIRTDNAESWLLTTYLDDE LRISRGDGSSIFVLFKEGSTLLY</aaseq>

Gene Sequence

<dnaseqindica>1..93#386..507#2120..2318#3089..3400#gtcacctactactacacacagcgacagagaggagcagagccgcaagaagagtcgagtcatggcggggtcgtcgtccctcagcacgctctccctctgcacgcagtcgccatcaccgtcaccggtggcgtccgcccgcctcgtggcaccggctgtcctcggtttcgccggggccccgcggttcccgacgctgcgggccgcgccacggcggctgacggcgcgggcggtggccggggacgccgaggacgagtgggggaaggagccggcggcggaccagggcggtgccgccgcggcggtggccgaggcgcccgcggatgtgccggtgacgagcgaggtcgcggagctcaaggcgaagctgaaggaggcgctgtacggtacggagcgcggcctgcgcgcgtccagcgagacgcgcgcggaggtggtcgagctcatcacgcagctcgaggcccgcaaccccacgccggcgcccaccgaggcgctcaccctcctcaacggcaagtggatcctcgcgtaagcccttctcacttttcccctctcgctccatttcttatttatattactacatatatttacatgttctttgttatatttttagtttgacttaaattggtgatgaatcgatctaattggtgtggttactagagggaaaattgttgctcacgtgctttatttttgtcattttgtgtttgttaatccaaatgtataatttcgtaggtatgcatagttaagagagtgttgtgacttgattacatatcattctacaaatcgctttaattaaatgttcgggtttacagggtgatccttgatttccatagtctgttttaagtaatgctgaaatcagatttacagaacggctcttcttttgctagcttatttgtttgaatcattttatcacccttgtaaaggtaccaagagatgctactaattctgtatcccttagactctgtttgttttttttttttttgacggaagaaggtagagcaggctctacataaagtcatttcattaatagaaatgaggtttacagattactccttccgtcccaaaaaaaggcaaaccgtgggtttccgtgccaacgtttgactgtccgtcttatatgaattttttttataattagtattttcattattgttagatgataaaacatgattaatactttatgcgtgactcatctttttaatttttttcataattttttcaaataagacggacggtcaaacgttgggcacggaaaccagggtttgtctttttttgggacggagggagtacatattaggtgtgggaattaacagagagggaaataaacagaaaaagaaaggggagaggggagaacaagccaaaaaaagaaaaaagggagaatttacacatatatgtacatgaagctttcttctaggaaagccttgagcaccaggaatgaattttttgcctatttgtttcattggtccttaggctccagagctgtatggtgtctgaaacttgttgaatgcattgtagactgtcaaactgtctttcgaacacccggttgttgtgtgctttccatagagtgtacgctcaagcagcaaaccaaattggctcaattcctttcaatgtttgatttctgtccataattgcctggaggaaggctgagatagaatctgagctgttggccagctgtagtaagttcaatttttcccaaaggctattggcctgtctgcaccttaagatgatgtgatcagctgtttctagtgcagggcacaaagagcagtgggggtctttgttccattttttgttgactctgtttgttataacttataagaaccaaacatctgctagcttggataacctttgcgttgatctcaacctaaattgctaagggaggagagtcttttaaagaccgttttatgcacaagctgtaatgaaaacagggtattcaggtacctgttgctatcatttacttgagaaaaggacaattgtgattggttcagttctttggacactcacatggtcaaatgatctcaacatcataagtaacgtattaaaccaatgactaggatgttgagaagtctaagaggtcacaattcctattaaatgtagttgcagagtcactgaatagtttggagactaataaattaggtgactacaggtacacctcattttcacagctattcccactattggggtctggtagtttgcctcagcttgtcaaggtggaagaaatatcacaaactattgattctgagaacttcacggttcagaattgcatcaagttttcaggacctttagcaacaacttcagtgtctaccaatgccaaatttgaagttcgaagtcccaaacgtgtacaggtgtgattttcctctctcaatcatgtatttcattttctcatgaaaccattctgtgatccattgatatgtgcaaaggtgttaggttttttatggatatctgggaaaagcgtgagcatgaaattttactttaaaacaatttggatagtatgagatttacacttttaagtacagcagcctttatatctcataaaggagaagatttcaggaaattttcggtactgaagttctttgtggagcatttcccataaagttaattgattgcatgcaatcattacattttgaaatatccgttgaagatatggagaaaagcacagatttggatgagttcacaactgctagggcatgcacaaatctgtccatgttgtgaactgtgggatattatttttactgctacatgtatatggatatggaagtgaaacatgtattaactattaactattttagattgttgctattgctgttcccggatctacctaattagttactccctctgtcccaaaatatagcaagttttgaacggattggacatatcctaggactacgaatctggacagacccctttcaaattcgtagtcctaagatatgtcccatccgttcaaaacttgtaatattttgggacaaaggaagtatgtaatatgaagaggtttggtaacaaggggtgggaaagaaaacccttccatttatgttttttctacagtatttatttgcatatgtcaactgaactttgttataggtttctgcaaaactcacatagtttgcaaccctttcagatcaaatttgatgaaggcattatcggcactccacaattgactgattctattgtactacctgagaagtttgagttatttgggcagaatattgacctgaccccattgaagggcatattttcatcaattgaaaatgcagcatcctcagttgctagaaccatctctggtcaacctccactaaagataccaattaggactgacaatgctgagtcttggttgctcacaacctaccttgatgatgagcttagaatctccagaggtgatggcagcagcatctttgtactgtttaaggaaggaagcaccctcctatattaagcttggcatgcctaatctagggtagaacttgatgctgaagcaactccaagcagtacttgtggctaaattatttttcatatttaagttggtgtgttgttatttgtgtttgtatagttcgggcgtttggattatgtgaagttttgtgtatgtgtaatgtattctttgatgtccctgagcacctgagctgctatactagtatacatgttatatattgcaaaagttacactg</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0133600, RefSeq:Os09g0133600