Os06g0255200

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Revision as of 09:13, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0255200| Description = Conserved hypothetical protein| Version = NM_001187768.1 GI:297724666 GeneID:9271208| Length = 6429 bp| Definition ...")
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Gene Name

Os06g0255200

Description

Conserved hypothetical protein

Version

NM_001187768.1 GI:297724666 GeneID:9271208

Length

6429 bp

Definition

Oryza sativa Japonica Group Os06g0255200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:8042567..8048995

Sequence Coding Region

8043862..8043966,8044059..8044120,8045486..8045691,8045779..8046498,8046588..8046787
,8047213..8047356

Expression

GEO Profiles:Os06g0255200

Genome Context

<gbrowseImage1> name=NC_008399:8042567..8048995 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:8042567..8048995 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcctcatcccaacaagttgagcttgaggctgcaaagcttcttcagaaactcattcaagagtcaaaggatgaacctgctaaattagcaacaaaactttatgtgatatgccaacatatgaaactaagtggaaaagagcagtcactgccatatcaggtcatatcaagggccatggagactgttgtaagccaacatggaatagatatggatgcgttgcgatcatcgagaatcccattagctggtggtccacaagcaggagattctagtggtgctatgcctaaggataaggagatcattggcagtcaacctcccatggttggtactgatgcatcccaaagtagtgcgcatgctggattatggaattttccatcaggttcagcagatatggcacgtcacagtgcatctatttcaggcagggtcccagcaggaccaaataggagcgatgttgcaggagctgatattcatcaaggctccatgtcacagaagagtggaagatcctctggaatggaaagccctgccagtctgcaaatagaggatactagatctatgaattcacatgattctttgaagtcagatgaaaaaacaagcaaaaaatcatcttctaagagaaaaagagtggatccaaaagcagcaggggacttgcattctgaagacaactcaaaatcagatgccatgtctaccggacaaaatattagaaagggaaaacagcctggcaaagctggtactcagggtcaactttccaggacagtcgaacacgatccatcacatacattacaagttggtaatgctcaggtgccaccgttacccagtggtgcacctttctttagggctcaccaggaaggaccatcagcttcttctgcaaggactatagacaagactaaaccatcaaatccattcacaatggcacaaatttcaaattttgctgaaggactagcttctggcaacattcctgctgagttgcagaaaagtatattgggaggagcaaatctacttaatgctagttttggctggaaccagaatgcacaaggtccagttatgaagaatactcaagggtctgttcccaacctaatgagacctggtgttaatgtcgaagggaaagttaacttaggatcacaaggaacttttaattctatgtctgcatcacaaatggattaccccacagttcctccttatgtgtcttcttcctttggaggtggtccacagtatcttgacaaagggaaagacttgacttcaggcaatactggcagtgaactaaattcttctaaagctggagctcagctggggatcatgcattccaatgcaagaaaggcacggaattgtcagagcacctcagagagctggttcatctcaaatgtctcaaacctctcccagcattccattcaaagagcagcagttgaagcagctcagagcgcagtgcttagtatttcttgcatttag</cdnaseq>

Protein Sequence

<aaseq>MASSQQVELEAAKLLQKLIQESKDEPAKLATKLYVICQHMKLSG KEQSLPYQVISRAMETVVSQHGIDMDALRSSRIPLAGGPQAGDSSGAMPKDKEIIGSQ PPMVGTDASQSSAHAGLWNFPSGSADMARHSASISGRVPAGPNRSDVAGADIHQGSMS QKSGRSSGMESPASLQIEDTRSMNSHDSLKSDEKTSKKSSSKRKRVDPKAAGDLHSED NSKSDAMSTGQNIRKGKQPGKAGTQGQLSRTVEHDPSHTLQVGNAQVPPLPSGAPFFR AHQEGPSASSARTIDKTKPSNPFTMAQISNFAEGLASGNIPAELQKSILGGANLLNAS FGWNQNAQGPVMKNTQGSVPNLMRPGVNVEGKVNLGSQGTFNSMSASQMDYPTVPPYV SSSFGGGPQYLDKGKDLTSGNTGSELNSSKAGAQLGIMHSNARKARNCQSTSESWFIS NVSNLSQHSIQRAAVEAAQSAVLSISCI</aaseq>

Gene Sequence

<dnaseqindica>1296..1400#1493..1554#2920..3125#3213..3932#4022..4221#4647..4790#ggaggacacactgcagagagagagaaagggtcagtcggaatggcggaggcggcgagctcgagctcgggcacgtagctctcacgccgctcgccgtcgtcgctttccccggcgaggccgcccgcgccggccgccgccgccgcctcttctccggaggccgccaccgcctccccgcgcggcggctccggggtcacccgtctcgccccccccctctcccgctagggttttctcggatcccgaatcgccgtaagccaccaccccccacgacgacttctctggttgttttgcttggagctcgagctcacgggaccgctgctttggtcggatttggggatcgtgcacctctttcctatctggtgagaagcgatcagtgtagcgctgctccctcttaagctagggttagtgcgtaagtgggaaagtaaattgttttggggggagatgaactcgggacatccggcttcttctctagatagtaggtttgattgcggtgtgccgtggaattgcctaccacgcctgataattttggtatcctgtgcggaaaaaaaattatgcgtattaaaataattagaatttttttccctgaaccgtacactgagatatttttggcctggtgccatatttgacaggtaaatgcaatatctagcatgatctgactggttttgtcctggatgtagtcactcgcttagtttctttgtgagtttttgctaaaggatgggatctcttgcttttggcgctttagttgattggtcttaataaagcttatttccattcttaaaagttggagctattccattgtatgcatgggatggtgtagcttgcagttaaggccccatgcagtgttacatgtttccagaaataccaaatctctaaactttatctgcacacgtagtgatatttcttctgttttatacaaaaacagcttgaatcaaagatggcttatgcgtaacagtgtaagcagtctgattcttgttatcgatttagcatcacatctgtggtgagcaaggaaaacctaaagcagttgttttgttgaagtcctgatgttagtagctaacctacagcaccatattgtttatgatgtaataattttctacattgcattaatattctgcatcagctaaaaatacccctgaaataccaggctatggtatctgtacacaatatattctgtatctgatgcttgaaggctgtaatttttattcatttacatgagcttctacttggttacaaaaattaaatgagctatgatttatttcatttctcttggaattatctcactctgatgacaggtagtttcacaaatggcctcatcccaacaagttgagcttgaggctgcaaagcttcttcagaaactcattcaagagtcaaaggatgaacctgctaaattagcaacaaaactttatgtggtatgttgctcagctagttatgtagaagcttaggaggatatgaaaaactttaaaaccagaccataacctttttacttaatttgatctttcagatatgccaacatatgaaactaagtggaaaagagcagtcactgccatatcaggtcatatcaaggtgattttttttctttagttgtagactttctttttttaagaaagaacttgttatctattaaattcaaataccttatagatttttccattttttgtgagtcagagttgtttaaatgttaaaacaaaaattgcgttgctccatttgttgtatcgtcataattgacattcaaaattggtattgtagttgtactatacttgtgttagagttccacttcatttaattttatagatgctaacaaactggattttcacgcatcagtgaaacataagtatggcgacacttgtggaaacattatatgtggtgacgtcctagatgtgttatgaggtgtactgatgcataggttccttaagctatatcaggtgactgccttgatgttaataaggaatactccctccgttccaaaatgatcatcatatagtttttttgaggttattcctaaatgattatcatatttgtgttcattcattaagtctattcgttatttgtgcattgaagtaaatggacattggtgcatgcatccatgcacacaagtatttataacccacatgcaatatcttgatttgctattggctaggaaatagtggggatggtgcatgcatcgagtttgttgctagagtaaatataatatgagagagttattagcttttcttggtcttggtgtacctatgaaatatgtagatcaatttggaatgaagagagtaacacattatgctaagatgtatgatgtgggaggcgctcatcctccaaccttcttattgaaccgatgaaaaaaattgaatagttggagagaagtaggtggaagatagcagcaagggcacggtagactgatagagaactgaactaaagcagcaaggcgggaggagcgagctacttttacttagctggcaattggcatgtttgtagtgtaatattatgtatcatgaccttccatgactctgtggacataacaaatttgcggccaatgtttctggaacgcctcctttagcaacttttgccttggactgcattccttgggaataaatcatgcgtgtagtgttttgaagccattgtgctttctcttgtccgcggaattgtgaaacacatgattttccaagtatggtcatcttgtatattttttcttaatgtagtgtttgtcagtttacacacactcgtgcgcgcgcacacacaaaaacacaaaagttactcacactgtgtctccttactggttggtgtcacgtaatttatcacaaatgtgatctaccttatttgttcgaaataccaagtgaaaaggtgctgtgtcgaaataaagttttatctgatttttcataatttagaccttaatttttgcctccacaattccaaacttctattaacatttgtcaacagggccatggagactgttgtaagccaacatggaatagatatggatgcgttgcgatcatcgagaatcccattagctggtggtccacaagcaggagattctagtggtgctatgcctaaggataaggagatcattggcagtcaacctcccatggttggtactgatgcatcccaaagtagtgcgcatgctggattatggaattttccatcaggtaaccaagtaaatcaacatggtaatctcagccacctgttttggatttatgagtttgacctgatgatgcattgtattatattgtcaggttcagcagatatggcacgtcacagtgcatctatttcaggcagggtcccagcaggaccaaataggagcgatgttgcaggagctgatattcatcaaggctccatgtcacagaagagtggaagatcctctggaatggaaagccctgccagtctgcaaatagaggatactagatctatgaattcacatgattctttgaagtcagatgaaaaaacaagcaaaaaatcatcttctaagagaaaaagagtggatccaaaagcagcaggggacttgcattctgaagacaactcaaaatcagatgccatgtctaccggacaaaatattagaaagggaaaacagcctggcaaagctggtactcagggtcaactttccaggacagtcgaacacgatccatcacatacattacaagttggtaatgctcaggtgccaccgttacccagtggtgcacctttctttagggctcaccaggaaggaccatcagcttcttctgcaaggactatagacaagactaaaccatcaaatccattcacaatggcacaaatttcaaattttgctgaaggactagcttctggcaacattcctgctgagttgcagaaaagtatattgggaggagcaaatctacttaatgctagttttggctggaaccagaatgcacaaggtccagttatgaagaatactcaagggtctgttcccaacctaatgagacctggtgttaatgtcgaaggtacttcaattaaaaaagaattacataatagtctcactagagacattgaaattcaaaaatttaccttaatgattgtgcttatgctacagggaaagttaacttaggatcacaaggaacttttaattctatgtctgcatcacaaatggattaccccacagttcctccttatgtgtcttcttcctttggaggtggtccacagtatcttgacaaagggaaagacttgacttcaggcaatactggcagtgaactaaattcttctaaagctggagctcagctggggatcatgcatgtacgacctttagcttaattttaaatatccttatgttaaaagcttgttcttgcatgctgttttcgagacactgtgacttatatttgggggagaaatccttgttagtgaaatgcaaaaatcttgttcctgtgctcgcttgttctagataaattcctctgggatatttccttcttttttatttgtagacatattgcaacatatttggcaaaccatgaagggtgtggtattcatttccgtaaacttcttgttgaactttgcacaaaaagtattgtttgcactttagtaaatctccttctgtagccagttttagaaacacttttgtttggtcatacagtcatcttttcattgatatgtgtatctccattggttgacttaatattttagatgcattttgacacacaaatgcggtataactttcagggcagtccaatgcaagaaaggcacggaattgtcagagcacctcagagagctggttcatctcaaatgtctcaaacctctcccagcattccattcaaagagcagcagttgaagcagctcagagcgcagtgcttagtatttcttgcatttaggtctgcacacccttccatatcctaatttgtgtcttgttctttgacagaatacatctatgcttaatattgaaacctcatctctgtagcactcatatcggctgtacttccttgtagaaataatctgcagccccggaaggtacatcttgaaattgctttaggtgttggtccccctgcttcagaaggtaaaaactaagaatagagcaatattgtgtgagctgtctgctttgtcagtcttgatgaatctatgcttgaaaaacaggtggcagtgcaggtcagagaggtagtgagagcagaatggctgatggttctggaaaggaaaatggaaacagccaggaaaaccctgctatttttggtaggcaaagtgatatttctagacttcaatcaacatctacaggcagtgttgcggatgttgattccgcatcaaaggacccagaaattgttaaaaagaagatcaagatagctgaacatgagaaatcatttgaagcagaaaatatccagcaaaccgttcctatacagggaactgattctgaaatgcattctcaagaaacgatatctcccatgccatctgggcaactgcattactttcagggagatacaagaaaaactacccctgagatctacaaggctgatgcagaaaatttgaataggaacttaggctgggtaggaggccagggaccatctcctttgggtggtaataggcatactagtatggaagttggcctcttggccaaagatgaagtgtccaaagaaccatttgcagttttgaggcctcatcatatgcctgttgatggtagcaaccacaatttatctggaaaggatcaaactcctgagacagctggcaatgaaattgataatggtagccacatgggagagatgatatttgagcgatctgcagatgaaggagacgaagatctttctgagcaagatgatttaccattatctcctccgaagtacacaatgactgataaatggattttggatcatcagaagagaagatatgaagaaaacaaaaggaaggcattagagttacagaaggcacacaggagaatttcagcatcctatgagaagctaaaggtcactccctacttttctcactttgaaatcctggaaattgaaaagcacacttttgaaatgtcacacgtctataaattattgtttatgtttcatgtatacaagattgtttccaaagtacagtcttttcctcatgtgttgtgatttttttaatacaatggacatctcgatttggtgcacatgtgcatgtgttatgctaccatattcaacacactgtaagtcttagttgaaaacttcaattccttctgttttcttcaggaaaatgttagttcatcggaggatctttctgcaaaaacaaagagtgtcattgaattgaaaaagcttcaacttctccaacttcaacgtcgtgtgcgcaggtctgcctgtcatggacaccatgaacttttaatttctcttcctaccagactttatgtttctgtggctatatttcccctgttttgatttcttctatttggcagtgaatttttgcaggactttttcaagcctaatactactgatttggaccgcataaaatcagtaaagaaacatagacatggacgtcgtgttaaacagcttgaaaaaattgaac</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0255200, RefSeq:Os06g0255200