Os06g0256300

From RiceWiki
Revision as of 09:13, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0256300| Description = Similar to Calmodulin-binding heat-shock protein| Version = NM_001063850.1 GI:115467431 GeneID:4340676| Length = 435...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os06g0256300

Description

Similar to Calmodulin-binding heat-shock protein

Version

NM_001063850.1 GI:115467431 GeneID:4340676

Length

4358 bp

Definition

Oryza sativa Japonica Group Os06g0256300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:8141729..8146086

Sequence Coding Region

8141796..8142170,8142268..8142603,8143303..8143361,8143483..8143611,8144288..8144423
,8145584..8145910

Expression

GEO Profiles:Os06g0256300

Genome Context

<gbrowseImage1> name=NC_008399:8141729..8146086 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:8141729..8146086 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcggtgtcgtgcgggctggagtgggtggtgtgcctggggtgcacgcggtgggcgtggaagcggctcacctacatcggcgcctacgacagcgaggcgtggccggcggcggcgccgggggagttcgagcccgtcccgcgaatctgccgcgtcatcctcgccatctacgaggacgacctctccaaccccaccaagttcgcgccgcccggccgcgggtacgccggcgtcgacctcgccggcgtcgtcaagcgcgccacctacgagcacgtcggcaacacctgccctccctacatcgtctacgttgaccaccgccacaaggaggtcgtcctcgccatccgcggcctcaacctcacccgcaacgccgactacaaggtcgttctcatggacaacaagctcgggatgcagatgttcgacggcggctacgtccaccacggccttctcaaggcggcgcagttcatcctggagagggagacgaagacgctgcaggagctgctgcagcagaacgggcccgactacaagctcatcttcgcggggcactcgctgggctccggcatcgccgcgctcatgaccgtgctcgtggtgaacaaccggaagatgtttgggaacataccgaggagccagatacggtgctacgcgctcgcccccgcccggtgcatgtcgctcaacctcgccgtcaagtacgccgacgtgatcaactccgtcgtgctgcaggatgattttttgccaagaacgccaacaccgttggagtacatttttgggtctatattctgcttgccctgcttgttgtttatcatgtgcctgagagatacatttaagcaagacaagagaaaatttaaagatccaagaagactctatgctcctggtcgaatgtatcatatagtcgagaggaaattttgcagatgtggaagattccctcctgaggtgagaactgctattccagtggaaggccgatttgagcatattgtgttgtcatgcagtactacttctgatcatgcgattgtatggattgaacgagaatcagaaaaggctttagagcttatgaaaggaaatgagaaaccaacaactccgcctgcgcaacaaaagatggaaagactgcagagttttgaggaagaacacaagaatgccctcgagagagcaaagaccttagatgttcctcacgcagttgacttgtctgaagtggagatccaggagggttctagccctacgccgccctctgatactcatagtgaagccacctcagaagcaaaatctgcaggaagaaccagttgggatgagctgatgcataagcttttcaccagggacgaaggtgggaagcttgttgtgaaggaggacattaaggcgaggaacattgttattgagtaa</cdnaseq>

Protein Sequence

<aaseq>MSVSCGLEWVVCLGCTRWAWKRLTYIGAYDSEAWPAAAPGEFEP VPRICRVILAIYEDDLSNPTKFAPPGRGYAGVDLAGVVKRATYEHVGNTCPPYIVYVD HRHKEVVLAIRGLNLTRNADYKVVLMDNKLGMQMFDGGYVHHGLLKAAQFILERETKT LQELLQQNGPDYKLIFAGHSLGSGIAALMTVLVVNNRKMFGNIPRSQIRCYALAPARC MSLNLAVKYADVINSVVLQDDFLPRTPTPLEYIFGSIFCLPCLLFIMCLRDTFKQDKR KFKDPRRLYAPGRMYHIVERKFCRCGRFPPEVRTAIPVEGRFEHIVLSCSTTSDHAIV WIERESEKALELMKGNEKPTTPPAQQKMERLQSFEEEHKNALERAKTLDVPHAVDLSE VEIQEGSSPTPPSDTHSEATSEAKSAGRTSWDELMHKLFTRDEGGKLVVKEDIKARNI VIE</aaseq>

Gene Sequence

<dnaseqindica>68..442#540..875#1575..1633#1755..1883#2560..2695#3856..4182#accagcagagcagcagccgccagcagcggcgaccggaggagagagcggcgtcgcggcggcggcggcgatgtcggtgtcgtgcgggctggagtgggtggtgtgcctggggtgcacgcggtgggcgtggaagcggctcacctacatcggcgcctacgacagcgaggcgtggccggcggcggcgccgggggagttcgagcccgtcccgcgaatctgccgcgtcatcctcgccatctacgaggacgacctctccaaccccaccaagttcgcgccgcccggccgcgggtacgccggcgtcgacctcgccggcgtcgtcaagcgcgccacctacgagcacgtcggcaacacctgccctccctacatcgtctacgttgaccaccgccacaaggaggtcgtcctcgccatccgcggcctcaacctcacccgcaacgccgactacaaggtcgtccgcaagcgattccccttcccccgatcgacccgaatgccatgaacggcggcgagatttggagagggaggctgactcggctcgatcccccctgcaggttctcatggacaacaagctcgggatgcagatgttcgacggcggctacgtccaccacggccttctcaaggcggcgcagttcatcctggagagggagacgaagacgctgcaggagctgctgcagcagaacgggcccgactacaagctcatcttcgcggggcactcgctgggctccggcatcgccgcgctcatgaccgtgctcgtggtgaacaaccggaagatgtttgggaacataccgaggagccagatacggtgctacgcgctcgcccccgcccggtgcatgtcgctcaacctcgccgtcaagtacgccgacgtgatcaactccgtcgtgctgcaggtacgacctcgagcgagcgagcgtgcagcttcttctgtggtgaaatgttggccgttgaattcgctgtcttggaaaattttttcccaatggagtggttggcgttagaaacattttccccattggagtggttggagataggagggggggataatttggttggagataggagggggggataatttggtcaatgtgctttgcttgtggctgtggtgtgattggaatgtctgaaattttaagctgtgcactagtttgattgtccagaacggaaggaatcatgtagctggagcttgtgctctgaagcttataggaggtttgttgaattagcgttcacgaaaaaaaagtttgttgaattatgtatgccgtgtttgattagagaagtgacaaaggaaggtagcaatgtctacctgtttccatgttcttgggtgaatttaattcatgtagcaagccaaagttttatttagtactattattaggtgttttttaagaaacatggatgattgcttagtttaatatgctatctgtgtcgggatgatttatgtcacttccatatgttgtagtatatctgttgcggtcttgttttaatgctgaacaagtgtgtagctcataaatcgaatgttaatatttactagcatttaagatacgtattatattgaatctcctctgaagttcataccctcaatgtacactatctttttacaggatgattttttgccaagaacgccaacaccgttggagtacatttttgggtctatattctggtaactttttcccgaccacttttctccaactacctgtatagttctactttcagttaaaagacaaaagaactgcatacagtggttaatttttttcaccagacctttattatgccttggacagcttgccctgcttgttgtttatcatgtgcctgagagatacatttaagcaagacaagagaaaatttaaagatccaagaagactctatgctcctggtcgaatgtatcatatagtcgagaggaaattttgcaggtaattggtgccttttaatagaagctatttgttgtttcttatgtcacgccagcattttaacctttctgcctttgttcgtgctattctagaacaagtttcagcaatgatctggacttctggtgttcatatttcaaactttccatgatctaaataaagggttcaattgccaatctatttttcggaaagcaagcagaaatgttaactgtttgtgctttataagcactagtcaagaaaacattgttccatactcatcaatagcatctatatttctgaggtagtgagaaatacataaaaaatattgatgcgtgattttaaattattcaattatacggagcatgggctggagtacctcctgttttttaggaggtgtagttctccctgcagctaaaaaaggaaagcttcaggagacaaaagcatactattcatctctatcatattagctacagataagcagatgatacagttcaaacaaatttgactcatttcaatatctatggctgacatagaatcccatagactagtctaatacagagtgcatgtgctgttttaaaaagtctaatttgtgtcctcatatatggttattatgacatgaatagatgacagattttcttttggcggagagagaggtcagatattgtgccgcattgacaataactgtagtactactcatttgtagatgtggaagattccctcctgaggtgagaactgctattccagtggaaggccgatttgagcatattgtgttgtcatgcagtactacttctgatcatgcgattgtatggattgaacgagaatcagaaaaggctttagaggtaagtgttatgctaatttgaaaaaaaattgtggcatcattatttgattaaaaatctgttcctctgttatctgttcgatgttgaattttttatacatcaatctactgttttatcagtacttagtctcatgaattgggatctatcagattttatcaactttcagggaaaatataaagaaactaatgacaggcttggaggatgatgatttgttagtatcataatataggggcttatttagtacttcctccgtttcataatgtaaatcattctagcattttccatattcatattaatgttaatgaatctagatagatatatgtgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggtaccattaagagtttagcaacagaccgccctatgttgttgaacattattactgacatgatgcaactcaccttgttgtaggcttagtggatctcaaaacattaggttcttgattgtttacttgaaccatcaagcataaacttttgatttctacaaagatgcatgtacgtttgatcaatacttctgatgcgatttttctatgctctaaaagcacaaggctgaaagacaaatgctatttttatgatctcttggtttatccataatcatggctggataattaaatttgaagtgggtatacatatttgatatgagtatttggctttgaacctttgtcatttcctcttcttattacatttcttttttgcaaactttgcttctctaagacagtgtaagaatatagagctaaacttgttttacaaccatgcgtgttcagtagtacagtatttttgggaaaagaaatcctgttattacttattactagcaccaaattgacgtggacaagaaagggatttcaaaaaagaaaaaaaaatcagacatgaacatcttaggcaccaacagctcaaagctcctatcagcaacattaatgaaggaacatggtacactagtgccaaattgcctaccatcattgtttttgtgttcttctcattttccaccagctaaattaaagaacccaaaagaaagataaatgttcattggatcttaacatttgccgcactaatttgctaagttgcatgaagaatacttgtttataattatagcgacactgttttgcagcttatgaaaggaaatgagaaaccaacaactccgcctgcgcaacaaaagatggaaagactgcagagttttgaggaagaacacaagaatgccctcgagagagcaaagaccttagatgttcctcacgcagttgacttgtctgaagtggagatccaggagggttctagccctacgccgccctctgatactcatagtgaagccacctcagaagcaaaatctgcaggaagaaccagttgggatgagctgatgcataagcttttcaccagggacgaaggtgggaagcttgttgtgaaggaggacattaaggcgaggaacattgttattgagtaataccgaccctcagacttttgatctggtaattgattcttttgcgtgcatatacagaagttcaacatgaaaatgttttttttttggatcgagccattttgcggtacgaaaactgtcccgtgtatatgtagacctatctgtgcattcttgaatccccaaagttttgttaatttacccgt</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0256300, RefSeq:Os06g0256300