Os09g0501100

From RiceWiki
Revision as of 07:31, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0501100| Description = Similar to 60S ribosomal protein L32A| Version = NM_001188998.1 GI:297727126 GeneID:9268508| Length = 2106 bp| Defi...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os09g0501100

Description

Similar to 60S ribosomal protein L32A

Version

NM_001188998.1 GI:297727126 GeneID:9268508

Length

2106 bp

Definition

Oryza sativa Japonica Group Os09g0501100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:20052642..20054747

Sequence Coding Region

20052791..20052880,20053794..20053975,20054325..20054454

Expression

GEO Profiles:Os09g0501100

Genome Context

<gbrowseImage1> name=NC_008402:20052642..20054747 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:20052642..20054747 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtggtgccgttgctgacgaagaagatcgtgaagaagcgggtgaagcagttcaagaggccgcacagcgaccgctacattggcctcaagacaagctggcgcaggccaaagggtattgactctcgtgtcaggagaaagttcaaaggatgcaccttgatgcccaacattggatatggttctgacaagaagacaaggcactaccttcccaacaagttcaagaagtttgtggtgcacaatgtctctgagctggagctgcttatgatgcacaacaggacatactgcgctgagattgctcacaacgtctccacccgcaagcgcaaggagatcgtcgagcgcgctgcgcagctggacatcgtggtcaccaacaagcttgccaggctccgcagccaggaggacgagtga</cdnaseq>

Protein Sequence

<aaseq>MVVPLLTKKIVKKRVKQFKRPHSDRYIGLKTSWRRPKGIDSRVR RKFKGCTLMPNIGYGSDKKTRHYLPNKFKKFVVHNVSELELLMMHNRTYCAEIAHNVS TRKRKEIVERAAQLDIVVTNKLARLRSQEDE</aaseq>

Gene Sequence

<dnaseqindica>150..239#1153..1334#1684..1813#cttctcccctcccgccgccgccgcctcgcttcgccgcaggagtttgcaaaggtaacgtgcgttccgcctcgccgtctcgccgccggcgtggttcgtggccgcgttctcctccccctcgtatccctaacgcgtctgtttttcgcgtgcagatggtggtgccgttgctgacgaagaagatcgtgaagaagcgggtgaagcagttcaagaggccgcacagcgaccgctacattggcctcaaggtactctctctctctctctctctctctctctctctctctctctcgccgttcttctcgcgcggtggcccaggattcgttagcagcagagactttggaatcgggatctacttcttagcgatgaatgtggctctagtttttgtttttttcagtcaagaatgtcctaatggcggttattagcttacggttaggtttagagtcttttacttgcacagcctggaatgcgcgcgcacacgattaatgatcatcctcctatagttcatcatttagtgatttaggaattaggaatacgatatgcatgctgtagtagttatagttgtcagtttgtcacccgcggttaagagcagactagtgatgtagtggttggaaatgggtataaattgtggtgatgaagtgatactgattttggatctgagcatgccttgctcttgaaattgagaagaatcgacctggtttgcatttgtgtaaactaaaatttactgtattaatgcttaactctgcagatgctctcttgctgttactataacctagtcattggcaatagttataggcttatagccttataggagaatgccctcttaattttgaatgtagatcaaattatattgactattgatactgatttggaaccgagtataatgaaccatactttgggggttgaaaatgtctgtagtctgtaccagatcaatcatctaggtaaaatcaaattgtgctatgctgaaatgtgctctgctcatgtttacatccacttatgttttatatggaattttcatcttgaggtgtggatcaccttttggttagcccgtaagatgaagtttttatatcgttttcagtctgcatcctagtcacgccatgtattgtcagtttttgtttgtgtggacacaagggctcattttcatttgcactgtttctgtagacaagctggcgcaggccaaagggtattgactctcgtgtcaggagaaagttcaaaggatgcaccttgatgcccaacattggatatggttctgacaagaagacaaggcactaccttcccaacaagttcaagaagtttgtggtgcacaatgtctctgagctggagctgcttatgatgcacaacaggtaattgaccttgtttatttgtagaacttcgagggtgccacacattgagagtaatcatagaacctttgattgcaacagtatttatgtgtgtactgccctattagggtggagcctcgaacaaaaatagcacagcagcaatcatctactcaaccacagtaacaagtgttcacatcttagatagcttaaattatatttttctagcattagacgagcggtgtgttgggggagccagttgatagcggttcctgttctgctgtctaaaccaatactagccgtctatatttagggatgttgggaaatacaatacttgtggttaagccttttctaatgccttatttgctgcaaacaggacatactgcgctgagattgctcacaacgtctccacccgcaagcgcaaggagatcgtcgagcgcgctgcgcagctggacatcgtggtcaccaacaagcttgccaggctccgcagccaggaggacgagtgaaattttctgcagtttttcgtgcttatggctgcattgttcgtagggcagtgccttggtaccttaaaattatccattttgtgttgctgttagatttgcccgtatggacatcattttgctgtgagtgacctgtctagttttagcaacaatgagataaaaagactttcagcttttcatcatcataaacttatgtggtttctcttgagcgctccaagttttctagatcctggaaacacttgttagttattattgtcctctatgagaatacaactaaatcaatccattattatagcatc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0501100, RefSeq:Os09g0501100