Os09g0501600

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Revision as of 07:31, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0501600| Description = Similar to MYC1| Version = NM_001070117.1 GI:115479976 GeneID:4347486| Length = 2177 bp| Definition = Oryza sativa ...")
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Gene Name

Os09g0501600

Description

Similar to MYC1

Version

NM_001070117.1 GI:115479976 GeneID:4347486

Length

2177 bp

Definition

Oryza sativa Japonica Group Os09g0501600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:20059925..20062101

Sequence Coding Region

20060257..20060297,20060383..20060467,20060564..20060758,20060844..20060918,20061002..20061070
,20061165..20061230,20061319..20061534,20061627..20061980

Expression

GEO Profiles:Os09g0501600

Genome Context

<gbrowseImage1> name=NC_008402:20059925..20062101 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:20059925..20062101 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacagcgactacgttgccggccttctcatgagcgccgccgccgcggggctcgacctcggtgtgctcgacggcggcggtggcgctttcttggagacgctgtgcggcgggcccggcttcgcggagcgggcggcgaggttgtgcggcggcggagctgggctcttcgggctgcctgcggtggggaacgccgagcgcggcggctgctcgagggaaggctcgtcggtgtccgaccctgcgtgggcgcacgccaccggcggcggcggcgacaatgccaggaagaggaaagctccggcgagcgccgccgccgggaaggacaaggacgccgtcgtgggcggcggcagcagcccgtgcgaggttggagaggcgaaggcgccggactccaagaaatgcaaagcggaggtgaatcccaaggtggaagaagccgccagcgatggctcggtgggagacagagtgcagaagcaaggaaaggggaagaactcatccaagccggccgccgagccgcccaaggactacgtccatgtccgggcacggcgaggtcaggccactgacagccacagccttgcagagagggttagaagagagaagattagccagcggatgaaagtgcttcaggacctggtgcctggatgcaacaaggtggttggcaaggcactcatgcttgatgagatcataaactacgtgcaatcgttgcagcagcaggtcgagttcctgtccatgaagctcgcgaccgtgaatccgcagctcgactttggcaacctatctacactcttacagaaagatatgttccaatcttgtggcccttcggtgaattccgtatttcctttggaaagtgccggtacagcttttccattttgtgaccaagcagattttttccagtcatttggtctgggagccatggaaaaccaatgtagcctagatctggcaaacacagctctaccccacacagggagcacacagtatgcttttcagaagcagcaaagggatctctgggaggataatactttccagtataacgacgaacaaagccaggaggatgcggtttctgcaccgaatttcgatggtcagttgcaagcagcagatcacacagagatcgagttctag</cdnaseq>

Protein Sequence

<aaseq>MDSDYVAGLLMSAAAAGLDLGVLDGGGGAFLETLCGGPGFAERA ARLCGGGAGLFGLPAVGNAERGGCSREGSSVSDPAWAHATGGGGDNARKRKAPASAAA GKDKDAVVGGGSSPCEVGEAKAPDSKKCKAEVNPKVEEAASDGSVGDRVQKQGKGKNS SKPAAEPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKVLQDLVPGCNKVVGKAL MLDEIINYVQSLQQQVEFLSMKLATVNPQLDFGNLSTLLQKDMFQSCGPSVNSVFPLE SAGTAFPFCDQADFFQSFGLGAMENQCSLDLANTALPHTGSTQYAFQKQQRDLWEDNT FQYNDEQSQEDAVSAPNFDGQLQAADHTEIEF</aaseq>

Gene Sequence

<dnaseqindica>1805..1845#1635..1719#1344..1538#1184..1258#1032..1100#872..937#568..783#122..475#acctacctaccgtctcctccattggactagctcctctctcccaattccactcctcgcttctcgcgcaattcttgcgggtttgtgttttttttttcttcttcttcttttggtttcttgatcgatggacagcgactacgttgccggccttctcatgagcgccgccgccgcggggctcgacctcggtgtgctcgacggcggcggtggcgctttcttggagacgctgtgcggcgggcccggcttcgcggagcgggcggcgaggttgtgcggcggcggagctgggctcttcgggctgcctgcggtggggaacgccgagcgcggcggctgctcgagggaaggctcgtcggtgtccgaccctgcgtgggcgcacgccaccggcggcggcggcgacaatgccaggaagaggaaagctccggcgagcgccgccgccgggaaggacaaggacgccgtcgtgggcggcggcagcagcccgtgcgaggtgggtcgagctcagctacagcgaattccaccatggagtgactgatcttgatgctgaacatgtcccgctccatttcttctttgggtttacaggttggagaggcgaaggcgccggactccaagaaatgcaaagcggaggtgaatcccaaggtggaagaagccgccagcgatggctcggtgggagacagagtgcagaagcaaggaaaggggaagaactcatccaagccggccgccgagccgcccaaggactacgtccatgtccgggcacggcgaggtcaggccactgacagccacagccttgcagagagggtaacaaagcacactgaaatctgtacaaatccatgtcaaatttgggggttgagtggaaattcacacactgtgctttgtggtttgataggttagaagagagaagattagccagcggatgaaagtgcttcaggacctggtgcctggatgcaacaaggtatcatcagattcctgaacgataaactgtcgcgccgaagtttcagttggtaccctatgtgttggctaatttgaagagattatccttgttttaggtggttggcaaggcactcatgcttgatgagatcataaactacgtgcaatcgttgcagcagcaggtcgaggttaggacacagccaaaacatttggttatgttgcttggtcagattatgaaaactctgatagtaacaatttggtaccatttcagttcctgtccatgaagctcgcgaccgtgaatccgcagctcgactttggcaacctatctacactcttacagaaagatgtgagctttgagttatcccaattcgcgtgcttcgggtccattagcaatatgctcctaacacgcaatttttctttgtaaaatccagatgttccaatcttgtggcccttcggtgaattccgtatttcctttggaaagtgccggtacagcttttccattttgtgaccaagcagattttttccagtcatttggtctgggagccatggaaaaccaatgtagcctagatctggcaaacacagctctaccccacacagggagcacacagtatgcttttcagaagcaggtgattgctgccttaaaaaacttgcaatctacggaacagatggtattaacatgcatatatgatgataacactgtttgcctttggttttcttttcagcaaagggatctctgggaggataatactttccagtataacgacgaacaaagccaggaggatgcggtttctgcaccgaatttcgatggttcgtgtaattgattatgttcacttgtattgcatgccttgttcagtatgatagactgatagcctgtatggatcaattgacacaggtcagttgcaagcagcagatcacacagagatcgagttctagatgatcaatgataacagccaatgatttttgtacatagaaagcatgaaaccagttgcaaagtgaagctcctaagctaactgttcttcgaaatttaggcccgagggaactgattcatttttcatatgctggatgtacggctacttgattcttctcatatttgtgagacaaatatgatctacaaaatagtaggttatgtactagatatggtgcaaatattacaagcaccatctctcttccagtatgtacgagccggctggtaatagcctggtattgccatgatacagtgtactgttgattttgtcttgaaatgaaaaggtatgtgctatttcaac</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0501600, RefSeq:Os09g0501600