BGIOSGA030777

From RiceWiki
Revision as of 17:25, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA030777

Description

cDNA clone:J023081B08, full insert sequence

Definition

Oryza sativa Indica Group BGIOSGA030777, complete gene.

LocusTag

CESA9

Ensembl Transcript ID

BGIOSGA030777-TA

Ensembl Protein ID

BGIOSGA030777-PA

Length

4082

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:13793835..13797916

Sequence Coding Region

13793835..13794105,13794211..13794446,13794542..13794638,13794730..13794856,13794943..13795555
,13795645..13795908,13795993..13796205,13796297..13796504,13796597..13796793
,13796877..13797230,13797329..13797916

Genome Context

<gbrowseImage1> name=IndicaChromosome09:13793835..13797916 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:13793835..13797916 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGCGAGCGCCGGGCTGGTGGCCGGGTCGCACAACCGGAACGAGCTGGTGCTGATCCGGGGGCACGAGGAGCCCAAGCCGCTGCGGGCGCTGAGCGGGCAGGTGTGCGAGATATGCGGCGACGAGGTCGGCCGCACCGTCGACGGCGACCTCTTCGTCGCCTGCAACGAGTGCGGCTTCCCGGTGTGCCGCCCCTGCTACGAGTACGAGCGCCGCGAGGGCACCCAGAACTGCCCCCAGTGCAAGACCCGCTACAAGCGCCTCAAGGGGAGCCCGAGGGTGCCCGGGGACGAGGACGAGGAGGACATTGACGACCTGGAGCACGAGTTCAACATCGACGACGAGAAGCAGAAGCAGCTGCAGCAGGATCAGGATGGCATGCAGAACAGCCACATCACCGAGGCGATGCTGCACGGCAAGATGAGCTACGGGAGGGGCCCCGACGACGGCGACGGCAACAGCACCCCGCTCCCGCCGATCATCACCGGCGCTCGCTCCGTCCCGGTGAGCGGGGAGTTCCCGATATCGAACAGCCATGGCCATGGCGAGTTCTCCTCTTCCCTGCACAAGCGCATCCACCCCTACCCGGTGTCTGAGCCAGGGAGTGCAAAGTGGGACGAGAAGAAAGAGGTGAGCTGGAAGGAGAGGATGGACGACTGGAAATCCAAGCAGGGCATCGTCGCCGGCGGCGCCCCCGATCCCGACGACTACGACGCCGACGTCCCACTGAACGACGAGGCGAGGCAGCCGCTGTCGAGGAAGGTGTCGATCGCGTCGAGCAAGGTGAACCCGTACCGGATGGTGATCATCCTCCGTCTCGTGGTGCTCGGCTTCTTCCTCCGGTACCGCATCCTCCACCCGGTGCCCGACGCCATCCCGCTGTGGCTCACCTCCATCATCTGCGAGATCTGGTTCGCCGTGTCGTGGATCCTCGACCAGTTCCCCAAGTGGTACCCGATCGACAGGGAGACCTACCTCGACCGCCTCTCCCTCCGCTACGAGCGCGAGGGGGAGCCGTCGCTGCTATCGGCGGTGGACCTGTTCGTCAGCACGGTGGATCCGCTCAAGGAGCCGCCGCTGGTCACGGCCAACACCGTGCTGTCCATCCTCGCCGTCGACTACCCCGTCGACAAGGTGTCCTGCTACGTCTCCGACGACGGCGCGTCCATGCTCACGTTCGAGTCGCTGTCGGAGACGGCGGAGTTCGCCCGCAAGTGGGTGCCATTCTGCAAGAAGTTCAGCATCGAGCCCCGCGCCCCGGAGTTCTACTTCTCCCAGAAGGTCGACTACCTCAAGGACAAGGTCCATCCCAACTTCGTCCAGGAGCGCCGCGCCATGAAGAGAGAGTACGAGGAGTTCAAGGTGAGGATCAACGCGCTGGTGGCGAAGGCGCAGAAGGTGCCGGCGGAAGGGTGGATCATGAAGGACGGGACGCCATGGCCGGGGAACAACACCCGCGACCACCCGGGCATGATCCAGGTGTTCCTCGGCCACAGCGGCGGCCACGACACCGAGGGCAACGAGCTCCCCCGCCTCGTCTACGTCTCCCGTGAGAAGCGCCCCGGCTTCCAGCACCACAAGAAGGCCGGCGCCATGAACGCCCTCATTCGTGTGTCGGCCGTGCTGACGAACGCGCCGTTCATGCTCAACTTGGATTGCGATCACTACATCAACAACAGCAAGGCCATCAGGGAGGCGATGTGCTTCCTCATGGACCCGCAGGTCGGACGGAAGGTGTGCTACGTGCAGTTCCCGCAGAGGTTCGACGGCATCGACGTCCACGACCGATACGCCAACCGCAACACCGTCTTCTTCGACATCAACATGAAGGGGCTTGATGGGATCCAGGGCCCGGTGTACGTCGGGACAGGGTGCGTGTTCAGGCGGCAGGCGCTGTACGGATACAACCCTCCCAAGGGACCCAAGAGGCCCAAGATGGTGACCTGCGACTGCTGCCCTTGCTTCGGGAGGAAGAAGCGGAAGCACGGCAAGGACGGCCTCCCGGAGGCCGTCGCCGCCGACGGCGGGATGGACAGCGACAAGGAGATGCTCATGTCGCAGATGAACTTCGAGAAGCGGTTCGGGCAGTCGGCGGCGTTCGTGACGTCGACGCTGATGGAGGAAGGCGGCGTCCCGCCGTCGTCCAGCCCCGCCGCGCTCCTCAAGGAGGCCATCCATGTCATCAGCTGCGGCTACGAGGACAAGACCGACTGGGGTCTCGAGCTGGGGTGGATCTACGGGTCGATCACGGAGGACATCCTAACGGGGTTCAAGATGCACTGCCGCGGGTGGAGATCGGTGTACTGCATGCCGAAGAGGGCGGCGTTCAAGGGGTCGGCGCCGATCAACCTATCTGACCGTCTCAACCAGGTGCTCCGGTGGGCTCTCGGCTCCGTCGAGATCTTCTTCAGCCGGCACAGCCCGCTCCTCTACGGCTATAAGAACGGCAACCTTAAGTGGCTCGAGCGCTTCTCCTACATCAACACCACCATCTACCCCTTCACCTCCCTCCCCCTCCTCGCCTACTGCACCCTCCCCGCCGTCTGCCTCCTCACCGGCAAGTTCATCATGCCTCCGATTAGCACGTTTGCGAGTTTGTTCTTCATCGCGCTCTTCATCTCCATCTTCGCGACGGGCATCCTGGAGATGAGGTGGAGCGGGGTGAGCATCGAGGAGTGGTGGAGGAACGAGCAGTTCTGGGTCATCGGCGGCGTGTCGGCGCACCTGTTCGCGGTGGTGCAGGGCCTGCTCAAGGTGCTGGCCGGGATCGACACCAACTTCACCGTCACGTCCAAGGCCACCGGAGACGAGGACGACGAGTTCGCCGAGCTATACGCCTTCAAGTGGACCACCCTCCTCATCCCACCCACCACGCTGCTCATCCTCAACATCATCGGCGTCGTCGCCGGCGTCTCCGACGCCATCAACAACGGCTCCGAGGCGTGGGGCCCGCTCTTCGGGAAGCTCTTCTTCGCCTTCTGGGTCATCGTCCACCTCTACCCCTTCCTCAAGGGGCTCATGGGGAGGCAGAACCGGACGCCCACCATTGTTGTCATCTGGTCCGTGCTGCTCGCCTCCATCTTCTCCTTGCTCTGGGTCAGGATTGATCCCTTCACCATCAAGGCCAGGGGCCCTGACGTCAGGCAGTGCGGCATCAACTGCTGA</cdnaseq>

Protein Sequence

<aaseq>MEASAGLVAGSHNRNELVLIRGHEEPKPLRALSGQVCEICGDEVGRTVDGDLFVACNECGFPVCRPCYEYERREGTQNCPQCKTRYKRLKGSPRVPGDEDEEDIDDLEHEFNIDDEKQKQLQQDQDGMQNSHITEAMLHGKMSYGRGPDDGDGNSTPLPPIITGARSVPVSGEFPISNSHGHGEFSSSLHKRIHPYPVSEPGSAKWDEKKEVSWKERMDDWKSKQGIVAGGAPDPDDYDADVPLNDEARQPLSRKVSIASSKVNPYRMVIILRLVVLGFFLRYRILHPVPDAIPLWLTSIICEIWFAVSWILDQFPKWYPIDRETYLDRLSLRYEREGEPSLLSAVDLFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGASMLTFESLSETAEFARKWVPFCKKFSIEPRAPEFYFSQKVDYLKDKVHPNFVQERRAMKREYEEFKVRINALVAKAQKVPAEGWIMKDGTPWPGNNTRDHPGMIQVFLGHSGGHDTEGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNAPFMLNLDCDHYINNSKAIREAMCFLMDPQVGRKVCYVQFPQRFDGIDVHDRYANRNTVFFDINMKGLDGIQGPVYVGTGCVFRRQALYGYNPPKGPKRPKMVTCDCCPCFGRKKRKHGKDGLPEAVAADGGMDSDKEMLMSQMNFEKRFGQSAAFVTSTLMEEGGVPPSSSPAALLKEAIHVISCGYEDKTDWGLELGWIYGSITEDILTGFKMHCRGWRSVYCMPKRAAFKGSAPINLSDRLNQVLRWALGSVEIFFSRHSPLLYGYKNGNLKWLERFSYINTTIYPFTSLPLLAYCTLPAVCLLTGKFIMPPISTFASLFFIALFISIFATGILEMRWSGVSIEEWWRNEQFWVIGGVSAHLFAVVQGLLKVLAGIDTNFTVTSKATGDEDDEFAELYAFKWTTLLIPPTTLLILNIIGVVAGVSDAINNGSEAWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFTIKARGPDVRQCGINC</aaseq>

Gene Sequence

<dnaseqindica>1..271#377..612#708..804#896..1022#1109..1721#1811..2074#2159..2371#2463..2670#2763..2959#3043..3396#3495..4082#ATGGAGGCGAGCGCCGGGCTGGTGGCCGGGTCGCACAACCGGAACGAGCTGGTGCTGATCCGGGGGCACGAGGAGCCCAAGCCGCTGCGGGCGCTGAGCGGGCAGGTGTGCGAGATATGCGGCGACGAGGTCGGCCGCACCGTCGACGGCGACCTCTTCGTCGCCTGCAACGAGTGCGGCTTCCCGGTGTGCCGCCCCTGCTACGAGTACGAGCGCCGCGAGGGCACCCAGAACTGCCCCCAGTGCAAGACCCGCTACAAGCGCCTCAAGGGTAAAAAAACACACTCACATCACGCTACTCCATTGATACCGCGATCGCGAGGTTTCCGTTGATTGATCTCTAATGGCGATGGTGGTGGTGGTGGTTTTGTTACAGGGAGCCCGAGGGTGCCCGGGGACGAGGACGAGGAGGACATTGACGACCTGGAGCACGAGTTCAACATCGACGACGAGAAGCAGAAGCAGCTGCAGCAGGATCAGGATGGCATGCAGAACAGCCACATCACCGAGGCGATGCTGCACGGCAAGATGAGCTACGGGAGGGGCCCCGACGACGGCGACGGCAACAGCACCCCGCTCCCGCCGATCATCACCGGCGCTCGCTCCGTCCCGGTACACACAACACACCTCACCCCACTCACACCAAATTCTCTCCCTCTTCTCACCTCAACATGTTCACGAAATGTTCTTTGTAAAAAAAAATTCAGGTGAGCGGGGAGTTCCCGATATCGAACAGCCATGGCCATGGCGAGTTCTCCTCTTCCCTGCACAAGCGCATCCACCCCTACCCGGTGTCTGAGCCAGGTAGTATAACTAATTCACTACACTAATTAATCAATGTTCTTGATGAACACACATTGATCATCTCAATCATCTACCGATGAATTCTGACCAGGGAGTGCAAAGTGGGACGAGAAGAAAGAGGTGAGCTGGAAGGAGAGGATGGACGACTGGAAATCCAAGCAGGGCATCGTCGCCGGCGGCGCCCCCGATCCCGACGACTACGACGCCGACGTCCCACTGTACGCAATCCTCAGCTGAGCAGCTTACACTGATCATGCATGACAACTAGTATATTGATCATGCCTGAACTCTCTGTGGCTTGCAGGAACGACGAGGCGAGGCAGCCGCTGTCGAGGAAGGTGTCGATCGCGTCGAGCAAGGTGAACCCGTACCGGATGGTGATCATCCTCCGTCTCGTGGTGCTCGGCTTCTTCCTCCGGTACCGCATCCTCCACCCGGTGCCCGACGCCATCCCGCTGTGGCTCACCTCCATCATCTGCGAGATCTGGTTCGCCGTGTCGTGGATCCTCGACCAGTTCCCCAAGTGGTACCCGATCGACAGGGAGACCTACCTCGACCGCCTCTCCCTCCGCTACGAGCGCGAGGGGGAGCCGTCGCTGCTATCGGCGGTGGACCTGTTCGTCAGCACGGTGGATCCGCTCAAGGAGCCGCCGCTGGTCACGGCCAACACCGTGCTGTCCATCCTCGCCGTCGACTACCCCGTCGACAAGGTGTCCTGCTACGTCTCCGACGACGGCGCGTCCATGCTCACGTTCGAGTCGCTGTCGGAGACGGCGGAGTTCGCCCGCAAGTGGGTGCCATTCTGCAAGAAGTTCAGCATCGAGCCCCGCGCCCCGGAGTTCTACTTCTCCCAGAAGGTCGACTACCTCAAGGACAAGGTCCATCCCAACTTCGTCCAGGAGCGCCGCGCCATGAAGGTAATATCGATCGCCATCGCCATTGCTGATTCTGTAGGAGCTTGACGAAGAGCTAACTGTTGTGGGGGCATTGGCATTTGATCGAGCAGAGAGAGTACGAGGAGTTCAAGGTGAGGATCAACGCGCTGGTGGCGAAGGCGCAGAAGGTGCCGGCGGAAGGGTGGATCATGAAGGACGGGACGCCATGGCCGGGGAACAACACCCGCGACCACCCGGGCATGATCCAGGTGTTCCTCGGCCACAGCGGCGGCCACGACACCGAGGGCAACGAGCTCCCCCGCCTCGTCTACGTCTCCCGTGAGAAGCGCCCCGGCTTCCAGCACCACAAGAAGGCCGGCGCCATGAACGCCCTCGTACGCCACGCACACCACATCCTTCATCTTCAAAACAAAAACAACTCCGCTCGATTTGATCGAAATTTCTGGTTTGCTTGGCAGATTCGTGTGTCGGCCGTGCTGACGAACGCGCCGTTCATGCTCAACTTGGATTGCGATCACTACATCAACAACAGCAAGGCCATCAGGGAGGCGATGTGCTTCCTCATGGACCCGCAGGTCGGACGGAAGGTGTGCTACGTGCAGTTCCCGCAGAGGTTCGACGGCATCGACGTCCACGACCGATACGCCAACCGCAACACCGTCTTCTTCGACGTGAGATATAATCTTTCAAAATCCAGAGCAAATCACGATCGATCGAGCAATGTGACTGAAATTTTGTGTTGGTTCTTGGTGAGATCATCAGATCAACATGAAGGGGCTTGATGGGATCCAGGGCCCGGTGTACGTCGGGACAGGGTGCGTGTTCAGGCGGCAGGCGCTGTACGGATACAACCCTCCCAAGGGACCCAAGAGGCCCAAGATGGTGACCTGCGACTGCTGCCCTTGCTTCGGGAGGAAGAAGCGGAAGCACGGCAAGGACGGCCTCCCGGAGGCCGTCGCCGCCGACGGCGGTGAGCTCCCAAATTCAGAGCTAAGAAAGAAATTTTGGTGTGTGAAAATTTTCAGCTGATGGAATAATGCAAGTTTGTATGTGGTGGATCAGGGATGGACAGCGACAAGGAGATGCTCATGTCGCAGATGAACTTCGAGAAGCGGTTCGGGCAGTCGGCGGCGTTCGTGACGTCGACGCTGATGGAGGAAGGCGGCGTCCCGCCGTCGTCCAGCCCCGCCGCGCTCCTCAAGGAGGCCATCCATGTCATCAGCTGCGGCTACGAGGACAAGACCGACTGGGGTCTCGAGGTAACCACCATTATCAAGCACTAAACCATGTTACCATGAGTGAGTTTGTGGTGTGAACGCCATGGATGGATGGGTGGATGCAGCTGGGGTGGATCTACGGGTCGATCACGGAGGACATCCTAACGGGGTTCAAGATGCACTGCCGCGGGTGGAGATCGGTGTACTGCATGCCGAAGAGGGCGGCGTTCAAGGGGTCGGCGCCGATCAACCTATCTGACCGTCTCAACCAGGTGCTCCGGTGGGCTCTCGGCTCCGTCGAGATCTTCTTCAGCCGGCACAGCCCGCTCCTCTACGGCTATAAGAACGGCAACCTTAAGTGGCTCGAGCGCTTCTCCTACATCAACACCACCATCTACCCCTTCACCTCCCTCCCCCTCCTCGCCTACTGCACCCTCCCCGCCGTCTGCCTCCTCACCGGCAAGTTCATCATGCCTCCGGTCAGTCCCATCCTGCCATCAATTGCTCCTCTTCTTCCATGGATTTTCCCGCCAAAACTGAAGTTTCAAATGTTCTGAACCTTTTCTTGGTGATGCAGATTAGCACGTTTGCGAGTTTGTTCTTCATCGCGCTCTTCATCTCCATCTTCGCGACGGGCATCCTGGAGATGAGGTGGAGCGGGGTGAGCATCGAGGAGTGGTGGAGGAACGAGCAGTTCTGGGTCATCGGCGGCGTGTCGGCGCACCTGTTCGCGGTGGTGCAGGGCCTGCTCAAGGTGCTGGCCGGGATCGACACCAACTTCACCGTCACGTCCAAGGCCACCGGAGACGAGGACGACGAGTTCGCCGAGCTATACGCCTTCAAGTGGACCACCCTCCTCATCCCACCCACCACGCTGCTCATCCTCAACATCATCGGCGTCGTCGCCGGCGTCTCCGACGCCATCAACAACGGCTCCGAGGCGTGGGGCCCGCTCTTCGGGAAGCTCTTCTTCGCCTTCTGGGTCATCGTCCACCTCTACCCCTTCCTCAAGGGGCTCATGGGGAGGCAGAACCGGACGCCCACCATTGTTGTCATCTGGTCCGTGCTGCTCGCCTCCATCTTCTCCTTGCTCTGGGTCAGGATTGATCCCTTCACCATCAAGGCCAGGGGCCCTGACGTCAGGCAGTGCGGCATCAACTGCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030777