Os06g0262800

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Revision as of 09:13, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0262800| Description = Similar to Very-long-chain fatty acid condensing enzyme CUT1| Version = NM_001063865.1 GI:115467461 GeneID:4340694| ...")
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Gene Name

Os06g0262800

Description

Similar to Very-long-chain fatty acid condensing enzyme CUT1

Version

NM_001063865.1 GI:115467461 GeneID:4340694

Length

1668 bp

Definition

Oryza sativa Japonica Group Os06g0262800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:8597246..8598913

Sequence Coding Region

8597346..8598830

Expression

GEO Profiles:Os06g0262800

Genome Context

<gbrowseImage1> name=NC_008399:8597246..8598913 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:8597246..8598913 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagtatggctgcacgttttctcgacagcctcaaggctacgtaccagtactaccaccgtgccatgggcaacgtcctcgtcgccgtgccggccgctgctggcgccctcgtcacggtggctctcctcgcgccggaggccgagtcgacgacggtggcgatcgggcgtctacgcgagctgatcaggcccgcgcacctcttcctggccgtcttcctcccggccgccgcggccaccgtgtacctcgtgatgcgcccgcgggcggtgtacctcgtcgactacgcgtgcttccgcacggcgcccaactgccgcgtccctttcgccacgttcctcgagcacgcgaggcaggtgcccacgctcaccgagcgcagcgtgcggttcatgacgcggctgctcgagcggtcggggctcggggaggagacgtgcctgccgccggcgcaccactacatcccgacctacaagtactgcaccctcgaggccgcccgtgccgaggtcgacctcgtcgtcttctccgccgtcgacgagctcttcgccaagaccggcgtcagccccgacgacgtcgacatactcgtcgtcaactgcagcctgttctgccccacgccgtcgttcgtcgacatgatcgtgaacaggtacaagctgcggagcgacatccgcagcatgcacctgtccggcatgggctgcagcgcgagcctcatctccatcggcctcgcgaggaacctcctgcaggtggcgccgcatggcgcgcgcgcgctcgtcgtctccacggagaccatcacgcccaactactacgtcgggaacgagcgcgcgatgctcctgcccaactgcctcttccgcatgggcggcgcggccgcgctgctgtcgacgtccccggcgaaggcgcggttccggctgaagcacgtcgtgcgcacgctcaccggcgcggaggacagcgcgcaccactgcgtgttccaggaggaggacgagcacgggagcatcggaatcaaccttagcaaggatctcatgaccatcgccggcaacgcgctcaaggccaacatcacggccatcgcgccgctcgtcctgccggcgtcggagcagctcaagttcgcgctcgccttcatcgcgcggaaggcgctcagcggcagggtcaagccgtacatcccggacttccgcgcggcgttcgagcacttctgcatccacgccggcgggcgggcggtgatcgacgagctgcagcgcagcctctgcctctcggacgagcaggtgcaggcgtcgcggatggcgctccaccgattcgggaacacgtcgagcagctcggtgtggtacgagctggcctacgtcgaggccaagggacgcatgcgccgcggcgaccgcgtgtggatgatcggcttcggctccggtttcaagtgcaacagcgcggcgtgggagtgcatctcgccggcgcgcgacgacgacgggccgtgggccacgtcgatccacaggtatccggtggacattcccgacgtgctcaagcactag</cdnaseq>

Protein Sequence

<aaseq>MSMAARFLDSLKATYQYYHRAMGNVLVAVPAAAGALVTVALLAP EAESTTVAIGRLRELIRPAHLFLAVFLPAAAATVYLVMRPRAVYLVDYACFRTAPNCR VPFATFLEHARQVPTLTERSVRFMTRLLERSGLGEETCLPPAHHYIPTYKYCTLEAAR AEVDLVVFSAVDELFAKTGVSPDDVDILVVNCSLFCPTPSFVDMIVNRYKLRSDIRSM HLSGMGCSASLISIGLARNLLQVAPHGARALVVSTETITPNYYVGNERAMLLPNCLFR MGGAAALLSTSPAKARFRLKHVVRTLTGAEDSAHHCVFQEEDEHGSIGINLSKDLMTI AGNALKANITAIAPLVLPASEQLKFALAFIARKALSGRVKPYIPDFRAAFEHFCIHAG GRAVIDELQRSLCLSDEQVQASRMALHRFGNTSSSSVWYELAYVEAKGRMRRGDRVWM IGFGSGFKCNSAAWECISPARDDDGPWATSIHRYPVDIPDVLKH</aaseq>

Gene Sequence

<dnaseqindica>84..1568#cggggaaccaacaaaccaacacacatccaacgaaagggtgagcaaccaaactttaactgtacaacgtaggcatagcgcgcggcatgagtatggctgcacgttttctcgacagcctcaaggctacgtaccagtactaccaccgtgccatgggcaacgtcctcgtcgccgtgccggccgctgctggcgccctcgtcacggtggctctcctcgcgccggaggccgagtcgacgacggtggcgatcgggcgtctacgcgagctgatcaggcccgcgcacctcttcctggccgtcttcctcccggccgccgcggccaccgtgtacctcgtgatgcgcccgcgggcggtgtacctcgtcgactacgcgtgcttccgcacggcgcccaactgccgcgtccctttcgccacgttcctcgagcacgcgaggcaggtgcccacgctcaccgagcgcagcgtgcggttcatgacgcggctgctcgagcggtcggggctcggggaggagacgtgcctgccgccggcgcaccactacatcccgacctacaagtactgcaccctcgaggccgcccgtgccgaggtcgacctcgtcgtcttctccgccgtcgacgagctcttcgccaagaccggcgtcagccccgacgacgtcgacatactcgtcgtcaactgcagcctgttctgccccacgccgtcgttcgtcgacatgatcgtgaacaggtacaagctgcggagcgacatccgcagcatgcacctgtccggcatgggctgcagcgcgagcctcatctccatcggcctcgcgaggaacctcctgcaggtggcgccgcatggcgcgcgcgcgctcgtcgtctccacggagaccatcacgcccaactactacgtcgggaacgagcgcgcgatgctcctgcccaactgcctcttccgcatgggcggcgcggccgcgctgctgtcgacgtccccggcgaaggcgcggttccggctgaagcacgtcgtgcgcacgctcaccggcgcggaggacagcgcgcaccactgcgtgttccaggaggaggacgagcacgggagcatcggaatcaaccttagcaaggatctcatgaccatcgccggcaacgcgctcaaggccaacatcacggccatcgcgccgctcgtcctgccggcgtcggagcagctcaagttcgcgctcgccttcatcgcgcggaaggcgctcagcggcagggtcaagccgtacatcccggacttccgcgcggcgttcgagcacttctgcatccacgccggcgggcgggcggtgatcgacgagctgcagcgcagcctctgcctctcggacgagcaggtgcaggcgtcgcggatggcgctccaccgattcgggaacacgtcgagcagctcggtgtggtacgagctggcctacgtcgaggccaagggacgcatgcgccgcggcgaccgcgtgtggatgatcggcttcggctccggtttcaagtgcaacagcgcggcgtgggagtgcatctcgccggcgcgcgacgacgacgggccgtgggccacgtcgatccacaggtatccggtggacattcccgacgtgctcaagcactaggaagacacggcatcgctgtccttctgaataattcagtgttaattaaaacagaaaactgtaatattcctgtttagtgtgtgtgtgaggctgcgttctttcc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0262800, RefSeq:Os06g0262800