Os06g0263400

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Revision as of 09:13, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0263400| Description = Very-long-chain 3-ketoacyl-CoA synthase family protein| Version = NM_001063866.2 GI:297605540 GeneID:4340695| Length...")
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Gene Name

Os06g0263400

Description

Very-long-chain 3-ketoacyl-CoA synthase family protein

Version

NM_001063866.2 GI:297605540 GeneID:4340695

Length

1515 bp

Definition

Oryza sativa Japonica Group Os06g0263400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:8644292..8645806

Sequence Coding Region

8644292..8645806

Expression

GEO Profiles:Os06g0263400

Genome Context

<gbrowseImage1> name=NC_008399:8644292..8645806 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:8644292..8645806 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaccatgagctcgccaccgccccgcgccagcaagcacctcaagtcggcgtaccggcttgccgccatcgccgtgccggttgtggcagccgccgtcgtcgtcatcgtcgtcctcctcagagcggcgcagctcggccccggcgagctcctcgctggccggcttggcgccgcgcggcacgtccacctcttcctcgccgcgctcgttgtcgtcccgtccgccgtggccacccttcttcgcctcgtccgccgcccacacagcgtctacctcgtcgactacgcctgcttccggcctcagccgagcaaccgcctcccattcgccaccttcgccgagcacttccgcctcagcccgcacatcgacgacggcagcttccgcttcgtgacgcgcatgatggagcggtcgggcctcggcgaacggacgtacgtgccccgtggcaacctctaccttccgccgcgcacggggatggaagaagcccgcgacgaggcggagattgtggtcttcgcggcggtcggcgacctgctcgccaggacgcgcatccgccccgaggagatcgacgtcctcgtcaccaactgcagcgtcttcagcccgacgccgtcgttcgcggacatggtggtgaacaggttcaagctccgtggggacgtccgcgccgtgcacctctccgggatggggtgcagcgcggggctgatcgccgtggaggtcgcgcgcaacctcctgcaggcggcggcgccccgcggcgcgcacgcgctggtggtgtcgacggagaccacgtcgttctcccactacgccgggacgagccgatcgatgctgctgcccaccgcgctgttccgcatgggcggcgtcgccatgctactctccacgtcgaggtcgtcggccaccaccaccacctcccggttccggctggcgcacatcgtccggacgctcaacgcggcggaagacagggcgtaccggtgcgcgtaccacgaggaggacggcgacggcaacctgggggtgaacctgtccaaggacatcgtccccgtcgccggcgagatgctcaaggccaacatcgcgacggtaggctcccgcgtgctcccgttgtcggagaagctgctctacgcgctgtcactcctcgcgcgcaaagtggccggcagccgacgacggaaggcgatcaaactccacgtgcccgacttccgcacggcgttcgagcacttctgcatccacgccggcggccggtcggtgatcgacgccgtgcagagcggcctcggcctcgccgacgaggacgtggaggcgtcgcggatggcgctccaccggttcggcaacacgtcgagcagctcggtgtggtacgagctggcgtacgtcgaggccaagggacgcatgcgccgcggcgaccgcgtgtggatgatctgcttcgggtcggggttcaagtgcaacagcgcggcgtgggagtgcatctcgctgccggcgcgcgacgccgacgggccgtgggctgattccatccatcagtatcccgtggccatcaccaccaccaccaaaatgtgctga</cdnaseq>

Protein Sequence

<aaseq>MTMSSPPPRASKHLKSAYRLAAIAVPVVAAAVVVIVVLLRAAQL GPGELLAGRLGAARHVHLFLAALVVVPSAVATLLRLVRRPHSVYLVDYACFRPQPSNR LPFATFAEHFRLSPHIDDGSFRFVTRMMERSGLGERTYVPRGNLYLPPRTGMEEARDE AEIVVFAAVGDLLARTRIRPEEIDVLVTNCSVFSPTPSFADMVVNRFKLRGDVRAVHL SGMGCSAGLIAVEVARNLLQAAAPRGAHALVVSTETTSFSHYAGTSRSMLLPTALFRM GGVAMLLSTSRSSATTTTSRFRLAHIVRTLNAAEDRAYRCAYHEEDGDGNLGVNLSKD IVPVAGEMLKANIATVGSRVLPLSEKLLYALSLLARKVAGSRRRKAIKLHVPDFRTAF EHFCIHAGGRSVIDAVQSGLGLADEDVEASRMALHRFGNTSSSSVWYELAYVEAKGRM RRGDRVWMICFGSGFKCNSAAWECISLPARDADGPWADSIHQYPVAITTTTKMC</aaseq>

Gene Sequence

<dnaseqindica>1..1515#atgaccatgagctcgccaccgccccgcgccagcaagcacctcaagtcggcgtaccggcttgccgccatcgccgtgccggttgtggcagccgccgtcgtcgtcatcgtcgtcctcctcagagcggcgcagctcggccccggcgagctcctcgctggccggcttggcgccgcgcggcacgtccacctcttcctcgccgcgctcgttgtcgtcccgtccgccgtggccacccttcttcgcctcgtccgccgcccacacagcgtctacctcgtcgactacgcctgcttccggcctcagccgagcaaccgcctcccattcgccaccttcgccgagcacttccgcctcagcccgcacatcgacgacggcagcttccgcttcgtgacgcgcatgatggagcggtcgggcctcggcgaacggacgtacgtgccccgtggcaacctctaccttccgccgcgcacggggatggaagaagcccgcgacgaggcggagattgtggtcttcgcggcggtcggcgacctgctcgccaggacgcgcatccgccccgaggagatcgacgtcctcgtcaccaactgcagcgtcttcagcccgacgccgtcgttcgcggacatggtggtgaacaggttcaagctccgtggggacgtccgcgccgtgcacctctccgggatggggtgcagcgcggggctgatcgccgtggaggtcgcgcgcaacctcctgcaggcggcggcgccccgcggcgcgcacgcgctggtggtgtcgacggagaccacgtcgttctcccactacgccgggacgagccgatcgatgctgctgcccaccgcgctgttccgcatgggcggcgtcgccatgctactctccacgtcgaggtcgtcggccaccaccaccacctcccggttccggctggcgcacatcgtccggacgctcaacgcggcggaagacagggcgtaccggtgcgcgtaccacgaggaggacggcgacggcaacctgggggtgaacctgtccaaggacatcgtccccgtcgccggcgagatgctcaaggccaacatcgcgacggtaggctcccgcgtgctcccgttgtcggagaagctgctctacgcgctgtcactcctcgcgcgcaaagtggccggcagccgacgacggaaggcgatcaaactccacgtgcccgacttccgcacggcgttcgagcacttctgcatccacgccggcggccggtcggtgatcgacgccgtgcagagcggcctcggcctcgccgacgaggacgtggaggcgtcgcggatggcgctccaccggttcggcaacacgtcgagcagctcggtgtggtacgagctggcgtacgtcgaggccaagggacgcatgcgccgcggcgaccgcgtgtggatgatctgcttcgggtcggggttcaagtgcaacagcgcggcgtgggagtgcatctcgctgccggcgcgcgacgccgacgggccgtgggctgattccatccatcagtatcccgtggccatcaccaccaccaccaaaatgtgctga</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0263400, RefSeq:Os06g0263400