Os06g0265400

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Revision as of 09:13, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0265400| Description = Similar to Transcription factor HBP-1b(C38) (Fragment)| Version = NM_001063877.1 GI:115467485 GeneID:4340708| Length...")
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Gene Name

Os06g0265400

Description

Similar to Transcription factor HBP-1b(C38) (Fragment)

Version

NM_001063877.1 GI:115467485 GeneID:4340708

Length

2532 bp

Definition

Oryza sativa Japonica Group Os06g0265400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:8784883..8787414

Sequence Coding Region

8785135..8785281,8785369..8785626,8785725..8785996,8786094..8786151,8786266..8786343
,8786564..8786623,8786727..8786813,8786901..8787098

Expression

GEO Profiles:Os06g0265400

Genome Context

<gbrowseImage1> name=NC_008399:8784883..8787414 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:8784883..8787414 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcgcaccaggggatggcggcggcgacggcggcggaccggttctgcctgccgaggatggcggcggcggcggcggccgcctcgcaggtggagaactggggcgactccggcgtcatcgtcagcagcccgttcaccgacgacacctccaccgacctcgacgacagcgccgacaagcaccacctccacgctctagtgggcggcggcgatggcggcgacgacgccggcgagcagcgaggcgcggattcctccgccgtgtccaaggaaagaagaggggatcagaagatgcagcggaggcttgcgcagaatcgcgaggcggcgcggaagagccggatgaggaagaaggcatacattcagcagttggagagcagcaggtccaagctgatgcaccttgagcaggagctccaaagggcaagacagcagggaatcttcattgcaactggaggctccggcgatcacgggcactcgatcggaggaaatggtacgttggcgttcgaccttgagtacgcgcggtggctggacgagcaccagcggcacatcaacgacctgcgggtggcgctgaacgcgcagatgagcgacgacgagctgtgcgagctcgtcgacgccgtgatgatgcactacgaccaggtgttccgcctcaagagcttcgccaccaagtccgacgtgttccacgtcctctccggcatgtggatgagccccgccgagcgcttcttcatgtggctcggcggcttccgctcgtcggagctcctcaaggttcttgccagccatcttgagccgctgacggatcagcagctgatgggcatctgcaacctgcagcagtcgtcgcagcaggccgaggacgcgctgtcgcaggggatggaggcgctgcagcagacgctgggggacacgttggtgtcggcggccgccaccgtggtcagcggcggcggcggcgccgacaacgtcaccaactacatgggacagatggccatcgccatggccaagctcaccacgctggagaacttcctccgtcaggctgatctgctgaggcatcagacgctgcagcagatgcaccggatcctgaccacgaggcaagcggcgcgggcgctgctcgtcatcagcgactacttctcgcggctccgggcgctgagctcgctgtggctggcgcggccgagggactag</cdnaseq>

Protein Sequence

<aaseq>MAAHQGMAAATAADRFCLPRMAAAAAAASQVENWGDSGVIVSSP FTDDTSTDLDDSADKHHLHALVGGGDGGDDAGEQRGADSSAVSKERRGDQKMQRRLAQ NREAARKSRMRKKAYIQQLESSRSKLMHLEQELQRARQQGIFIATGGSGDHGHSIGGN GTLAFDLEYARWLDEHQRHINDLRVALNAQMSDDELCELVDAVMMHYDQVFRLKSFAT KSDVFHVLSGMWMSPAERFFMWLGGFRSSELLKVLASHLEPLTDQQLMGICNLQQSSQ QAEDALSQGMEALQQTLGDTLVSAAATVVSGGGGADNVTNYMGQMAIAMAKLTTLENF LRQADLLRHQTLQQMHRILTTRQAARALLVISDYFSRLRALSSLWLARPRD</aaseq>

Gene Sequence

<dnaseqindica>2134..2280#1789..2046#1419..1690#1264..1321#1072..1149#792..851#602..688#317..514#atcatcttcttcctcctcccgacctcccgctcctccgcactagtaactcacgccactgtctcttccactgttgcattccaagaactgctcctttgtttgattcttgctgcattttgttttttgttttttttttgaaaaggtccgaatccgagctccaagtcgtcgagcaacctcaccgccggaggacaccttccgccgctcgccgtcgccgccgccgccgccgccgcggtgagtttggttctttcttcttgctgattgattgattcttcggctgatgcaatgcgaccagcagcagcatggcgtagcggtggtgggcatggcggcgcaccaggggatggcggcggcgacggcggcggaccggttctgcctgccgaggatggcggcggcggcggcggccgcctcgcaggtggagaactggggcgactccggcgtcatcgtcagcagcccgttcaccgacgacacctccaccgacctcgacgacagcgccgacaagcaccacctccacgctctagtggtgccactgccaccagctacctcctctcgccgccgtctttcttggctggctccactcgtgtaatgcggtttctcgtgctactcccagggcggcggcgatggcggcgacgacgccggcgagcagcgaggcgcggattcctccgccgtgtccaaggaaagaagaggggatcagaaggtgcagtcattttgtgtcagaggggaaacggaatctgatctcatgagtgatcaatttggttgtgttcattctgaatatgatttgtccccgaatttgtgtgcagatgcagcggaggcttgcgcagaatcgcgaggcggcgcggaagagccggatgaggaagaaggtgatcgtctgaacctatacattatcgatcattcattcgattaatgggacaattacaatatctgttaaatatactagagcattaattgcttcggaatcaatgttgactgctgctgccgttgctgcaatgttctgggagtagatgctctgctgttacttgcatctttgttttgtggttattgatgatgactaaagacattgcgaattgctgtttgtcgtaggcatacattcagcagttggagagcagcaggtccaagctgatgcaccttgagcaggagctccaaagggcaagacagcaggtgagccctgcattgttcagcatacttatcaaatcgccttgcagaatctaatgtttgaagtctgaacagctcagtaacaaatacgcaaatgcaattgacgactatcctttacagggaatcttcattgcaactggaggctccggcgatcacgggcactcgatcggaggaaatggtggtgttttccacttgcttgatttctctgatctgtcatggcatctgcgcaaacatcgcaattctgattctgtgttgtgttgtgtttgcttctgcaggtacgttggcgttcgaccttgagtacgcgcggtggctggacgagcaccagcggcacatcaacgacctgcgggtggcgctgaacgcgcagatgagcgacgacgagctgtgcgagctcgtcgacgccgtgatgatgcactacgaccaggtgttccgcctcaagagcttcgccaccaagtccgacgtgttccacgtcctctccggcatgtggatgagccccgccgagcgcttcttcatgtggctcggcggcttccgctcgtcggagctcctcaaggttttgacacgatcgagtgatcacccacccaattcagcaacaagcaaagaatctgaagctaccattgaccgccattgttgatgatgttgtttgtgcaggttcttgccagccatcttgagccgctgacggatcagcagctgatgggcatctgcaacctgcagcagtcgtcgcagcaggccgaggacgcgctgtcgcaggggatggaggcgctgcagcagacgctgggggacacgttggtgtcggcggccgccaccgtggtcagcggcggcggcggcgccgacaacgtcaccaactacatgggacagatggccatcgccatggccaagctcaccacgctggagaacttcctccgtcaggtaattgaagcttcggaaaaacatcgacggcgaggcgaactgaattgctcattaccacagcgtgatgcgatgattgattgtgtgtaggctgatctgctgaggcatcagacgctgcagcagatgcaccggatcctgaccacgaggcaagcggcgcgggcgctgctcgtcatcagcgactacttctcgcggctccgggcgctgagctcgctgtggctggcgcggccgagggactagactgactaaagaggatcaatatcatttgcctgagttctgagttctgacgatggatggaggtgaacctgttttttgattgctgaatcctgagagagcgttaactgcgatcggcattgtaaaatcagttgctttggtgatgaagcagtagtagtaggagaatattttagattgggctcttgggcctgtaacgtgttgtagtgttagcgtagtaagaactaatccgcgtacaatgtcaaaaggagaagttttatt</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0265400, RefSeq:Os06g0265400