BGIOSGA030914

From RiceWiki
Revision as of 17:25, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA030914

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA030914, complete gene.

LocusTag

OSJNBA0054F02.8

Ensembl Transcript ID

BGIOSGA030914-TA

Ensembl Protein ID

BGIOSGA030914-PA

Length

2989

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:16021208..16024196

Sequence Coding Region

16021208..16021648,16024005..16024196

Genome Context

<gbrowseImage1> name=IndicaChromosome09:16021208..16024196 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:16021208..16024196 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCATGTGTTAACATGTACAACCCGGAGCATCACCACCACCAGTCGTCGTCGTTCATGGCGCCGAGGATATCCTTCTCCAGCGACTTCGCGCTCGAGCCGCCGCCGCCGGCGCAGCAGCAGCCGGCGGCGCGGGCGCCTGGGGACGCCGACTTCGAGTTCTCCGTCGGCAGCCACCCGATGATGGCCGCCGACCAGCTGATCTCCAAGGGCCGCCTCCTGCCGCTCCGGGAGGCCCCGCACGGCCACGGCGGCGCCGACGCCGGCGTCCGGCCACTCACGCTCCGCGACGAGCTGCGCACGGACAGCCGCCATGGCCGCGTCCCCCGCGCGCCCAACATTCGGTGGAAGGAGTTCCTCGGCCTCAAGAAGGCGCCCAAGAAGGCCCCCACCGCCGACGCTGCCGCCGGCGCCACATCGTCGTCGGCCGACACCCAGATGCGCACAGCTGGGAGGAGGAGGCTACTGCGGCTGAAAGGGCCAGGTGCTATCTCTGCGCTCTTCTGCGGCACGTTGTACCTTAGGGGTCATTTTGGTCGGATTGTGGCTTGGAATGTTAGGACCCGGGTAACCAGTCAAGCTGACTGCTTAACAGTTGCCCACCACATTGTGTTCAGGTGTTCAGGTGCTTAG</cdnaseq>

Protein Sequence

<aaseq>MACVNMYNPEHHHHQSSSFMAPRISFSSDFALEPPPPAQQQPAARAPGDADFEFSVGSHPMMAADQLISKGRLLPLREAPHGHGGADAGVRPLTLRDELRTDSRHGRVPRAPNIRWKEFLGLKKAPKKAPTADAAAGATSSSADTQMRTAGRRRLLRLKGPGAISALFCGTLYLRGHFGRIVAWNVRTRVTSQADCLTVAHHIVFRCSGA</aaseq>

Gene Sequence

<dnaseqindica>1..441#2798..2989#ATGGCATGTGTTAACATGTACAACCCGGAGCATCACCACCACCAGTCGTCGTCGTTCATGGCGCCGAGGATATCCTTCTCCAGCGACTTCGCGCTCGAGCCGCCGCCGCCGGCGCAGCAGCAGCCGGCGGCGCGGGCGCCTGGGGACGCCGACTTCGAGTTCTCCGTCGGCAGCCACCCGATGATGGCCGCCGACCAGCTGATCTCCAAGGGCCGCCTCCTGCCGCTCCGGGAGGCCCCGCACGGCCACGGCGGCGCCGACGCCGGCGTCCGGCCACTCACGCTCCGCGACGAGCTGCGCACGGACAGCCGCCATGGCCGCGTCCCCCGCGCGCCCAACATTCGGTGGAAGGAGTTCCTCGGCCTCAAGAAGGCGCCCAAGAAGGCCCCCACCGCCGACGCTGCCGCCGGCGCCACATCGTCGTCGGCCGACACCCAGATGGTAATAACAAGCTCACTGTTTCTTGCGCCATGAATGCACTCTGCTACAGCTCTGCATTGTCCCATTTTGCTTGTCGCATTGCAACATTTTTCGAATCTTCAAAAACACCCTGCTTGCTGCAAGACCCTCCTGCGCAGTAGAGTACAAGCACTTTCTGCTTCAAAGATTTCTCAAAGTTTGGAGCCTGAGATAGATGTGCATTGCATGCATGTACTACTCATGCATTGCTAACCACCAGAACCAGATTGCACAGAAATTTTAGCGGCACAACTACTCATGCATTGTTAACCATTTTCCTGCTGAAGTGACAACAAAATGTATGCAAAACCCTGTAGGATCTTGGAGGTCAAGGGAGCACGAGAGACTGAAGCAACAAACGCAATGAAGTGTATTATTGATCAATGAGTACTACGTAGTAGTGAAACTGAAGTAGCCATGGTTGGCCAGATCGGATGCATGGTGGCGATGCGCCTTTCAGCTTGCTGTCTGCCATCACTCATATTCACTCTTGCTGATGATCTTAGCAGCTCATTCTAATGAAGAACTCTGCAGGGCAAATGGCCATTTCCTTTTACCTCTTTGCTGCATCTTTTTTGGGTGTAAAAGGGAATTTTGATCTCTAGTTTTTGGGTAATGGTCGTCGTCGGGTAGATGGGTGGTTCCAGTGTAGTCAAATTAACTCCGCTGCGCCTCTGATGTTTTGTATTGGAAGGGCCAGTAAAATTGTATTTTTCCCCACATGGTGTGGTCCTAGCTTAGCTTTTGTACGTGTTGTTTAGCTGTTCCCATGCTTGTCTGCTTCCGCCACCTCCGCTCTCTCCCCCACTTTCCCTATGTACAAAAATGCTTGTAATCTAGTAGTAGCTAGCAATTCAAGCTTTCAGTTCAATGAAGCCCATTTCAACGTTAATTAGCTTCCATCAATTGCTGAACAGTCATGGAGCTAACTAGTACTATGTTCAAATCAGGCAATGCAAGCCTGGCCTGTATTCAAGCAAGATATGGTTCAATTAAAGAAGAATGGAGAGAACGTACAGTGGGGACTATATGGACATATGGTACAAAGACACTTGAGAATTCAGTGACCATATACAACATATGGGGAGATTGTGTTCTTGCCTCCAACCTTTAGATGCAATTATGATTTTACCTCTGTTTTCTTTTTTATGATTTTGCCCTTCTTTTTTGACGCAATTTTTTTTTGGACGCAAACCCTTCTTCTTTTAAAACGAAACAGAGACAAAACAGCTAGTTGGTTGGTCGAAACTAGGGGCAAATAGTTGGTTCGTTTTTTTAAAAAAAGAGTTAAAATCACAAACCTTAAAAAACATAGGCAGAGTAACAATTGCATCTAAGAGCATAGGCGAGAACACAATTACCGCTATATATGGATATTGTGCCAGCCAGCGAGTGGCATGCATCTGATGAGCCAGGCGTTCAAGCATTAGTCTATCCGGGGTGCCAGCCAGCAGTCGATCGAGCAGCTTGTCCTGACGCGGCCGGCCTCATGGCCTCGTGGCCCGTTTAGTTCCTAAAAATTTTTTTCCAAAACATTAAATCGAATCTTGGATAAATGTATAGAGTATTAAATATAAATAAAAATAAAAACTAATTGCACAGTTATGGGAAAATAGCGAGATGAATCTTTTAAGCCTAATTAGTTCGTGATTAGCCATAAGTGCTATAATAACTCACATGTGCTAATGACGGCTTAATTAGGCTCAAAAGATTCGTCTCGTGGTTTCCCAGCGAGTTCTGAAATTAGTTTTTTCATTCGTGTCCGAAAACCCCTTCTGACATCCGGTCAAACGTCCGATGTGACACACAAAAATTTTCTTTTCCCCAACTAAACACGCCCTTAGAGCCCTAGCACATCTCCCTCCCTGTCGTGTAATGCTAGCTCCTCCTCCTCCTCCCATACCTGGTGATCACCGGCACAATGTTAAATTTTATGAGGAGACTTAGCTGTCAATCGTGCTACTACCAGCCATCCATCTCCATTACATACTGGAAGAGTACCGCTATCTCCCCTGCCATTGCACTCTCTGACAGCAAAGGTGTGGCCACAGGACAAAAACAAATGCCTGCACTGCATTGCACTGCACTGCACTGCCCAGCACATCAGGAAAAAGTTTTTCATCGCAGGGGCAGGGAGAGGGGGGGCCAGTTGCTGCTGCATCTGCGTGCATGCGACCACAGCATCTCCATCTCTGAATCATTTTGTTTTCTTGAGAGAGAAACCTGAAAAAATCACTCCCAGCATCTCCATCTCTGAATCCTTTTGGCTTTTTTTTTTAGAGAGAGACCTGAAAATCTCTCCCTCTGAATTCTGATTTGAATGGTATCTTTGGTGCAGCGCACAGCTGGGAGGAGGAGGCTACTGCGGCTGAAAGGGCCAGGTGCTATCTCTGCGCTCTTCTGCGGCACGTTGTACCTTAGGGGTCATTTTGGTCGGATTGTGGCTTGGAATGTTAGGACCCGGGTAACCAGTCAAGCTGACTGCTTAACAGTTGCCCACCACATTGTGTTCAGGTGTTCAGGTGCTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030914