BGIOSGA030916

From RiceWiki
Revision as of 17:25, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA030916

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA030916, complete gene.

LocusTag

OSJNBA0054F02.20

Ensembl Transcript ID

BGIOSGA030916-TA

Ensembl Protein ID

BGIOSGA030916-PA

Length

2922

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:16063625..16066546

Sequence Coding Region

16063625..16063822,16066004..16066546

Genome Context

<gbrowseImage1> name=IndicaChromosome09:16063625..16066546 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:16063625..16066546 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGACGACGCACGCATTGTCGCCGTCGCGCTTGCCGCAGCTCGACGCCGCTGGCTGCACCGCCGTCACGGTGGCGGCCGCGGCAGCCATGTGCTGTGCTCCTCCTCTAATGATCCCTCCCTCCCTCCCTCCCTTGGATGCTAATGCTAATGCTAATGCGGTCGTGGGCTCGTGGCAGTGGGTGTTATGGAGGGGGTCTAGAGACAGTTATTCAGACATGCTTGAAGGAGGCAACTTTTCCAACCAGGAGACCTTGTACGAAGTTCTATCCGTGAGGAAAGATGCTACATATGATGAAATTCGTGCAGCATATAAGTCTGCTGTACTAAATACACATCCTGACAAAGCACAGATGGCTCTCAATCCATTGGTGTCTTCCAGTGAGCGAAATGAATTTCTCAGTGTGCAAAAGGCATGGGAAATCCTACGTTATCCCAAATCTAGAGCAGAATATGATAAGCAACTGCAATCTTCCCGACAGAACCTTGAAATTGTTGCAACTGAAATTGAAATTGATGACATGATCGTTGAAAGTACTGCTGATTCTGTGGAGCTTTTGTATCCTTGTAGGTGTGGTGATTATTTCTCAATCACTTCACGTGAACTTGGTCAGATTGGAATTTCAGTCAGGGAGGACGGAGAGATGGAATTGCACACTTCTTATTCTGTTCCAGCATCTGTTGTTCTTGGCTGTGGCTCATGTTCTCTTAAGGCACGATTGGTTACAAATAAAACTTGA</cdnaseq>

Protein Sequence

<aaseq>MSTTHALSPSRLPQLDAAGCTAVTVAAAAAMCCAPPLMIPPSLPPLDANANANAVVGSWQWVLWRGSRDSYSDMLEGGNFSNQETLYEVLSVRKDATYDEIRAAYKSAVLNTHPDKAQMALNPLVSSSERNEFLSVQKAWEILRYPKSRAEYDKQLQSSRQNLEIVATEIEIDDMIVESTADSVELLYPCRCGDYFSITSRELGQIGISVREDGEMELHTSYSVPASVVLGCGSCSLKARLVTNKT</aaseq>

Gene Sequence

<dnaseqindica>1..198#2380..2922#ATGTCGACGACGCACGCATTGTCGCCGTCGCGCTTGCCGCAGCTCGACGCCGCTGGCTGCACCGCCGTCACGGTGGCGGCCGCGGCAGCCATGTGCTGTGCTCCTCCTCTAATGATCCCTCCCTCCCTCCCTCCCTTGGATGCTAATGCTAATGCTAATGCGGTCGTGGGCTCGTGGCAGTGGGTGTTATGGAGGGGGGTATTACGGGGCGGGGTTGGATGGGACGGGAGGAGATAACGATAGGATTAGGTAGGAGAGGAGACGGGACGGTGGTAGCTGCTTAGCTTATGGGCGGAGAGGAGGGTGTGTGTCTGTGTGTGCGGTGTGGTGGGCGTCGTGAACTCGCGGGCGCGGCGCGCGAGACTCCTCCCGCCGCGGGTAGTTTTAACGGCAGCGCGCGTACGTGTACGCGCGGGGCCTAGCGTGCGGCCTAGTGGTGTGCTGTCACTGCTCGTCACGACCTGTACTTGGGTCGGGTGGCTGCCGCCACGCGCCCCCCCGTGCCCCCGTGGGTTGGAGCGGAAACAGTATGCGAGCCGCGCGGTTGGGTCGCTGGCTGCGTGCGGACTGGGACTCTGGGAGTGGAGGATGGCTGGTTGGTGAGTTGCGGTGGGGAGTGGCGTGCGTGAAGAACGGGACTACGGGAGGCGCCCGTGGGTGGGGGGTGAACAGAACACAGAACAGGTGAGGTGACGGCAGATTGGCAAGTATAATTGGGCGATGCACATAAGATTCTGCTGCGGATAATTGGGTGGCATCTCAGTTGATCAGATAAGATTCTTTTAATGATATGGATGGAAGAGAGAGAGAGAACGGGAGGAGGACAGAGATTGAATAGTTGGTGTAGTAGGATTTCAAAGCCTGGGGGAAGTTCTTGGATGAACACGGACGGAGTTTTACATCCTCTCTGTCATGGACTCATGGTGTCCTGGAACTGTCACTGCTTTGTCAGACGTTCGCCTATAATTCACTCGACTCGAGTAGTCCAGTCCACATGTGTTTCATCTTTGTCAATTGTCATGCGTTCGTTTTTCTTTCTCGTTGCCTTTCAGAAACGTCCTAAAAACATTAAAACAATATGGAGGGAAAAGAAAAATCTGTCAGTTGCATGTTATGTGGTCAATTCGATCCGACGGCTGCTAATCAACTCTTGAATTCACATCCAACGGACGAGCCAATGAGGACGACCTAAATCCCTAGTCGGGCGATTCCCCAATCCCCATCAACTCCGCCGGGGCGCCGCCCCTCCCCTCCTCCTCACTGCCCGTCGGCTGCGCCGCCGCACCGGCCGCCGCCTCGACCAGCGGTTGACGGCGGCCCAGGTTCGGAAACCATTCACGTACCCCGCATCGGCCGCACCTCCCCTCGCCGCCTCGCGCGTCGCAACTTCGCCGCGCAAGCAGTCGACCCTGCGATCCACAAGGCTGCATCGGCCGTCAAGACCTTCGCCGTTATTTTGCTTGTCGGTGATAGTTGCTAACCTCCGTATCTGTTTTCTTAGAATTGTTCTTGCTGCTGCAAAATCGTGTGTAGAACTTGTCTCGATCAGCGGAGCAGTTTCTTCTATGTACTACGATGAATTGATGAAGTGGCTGGATACTGACATGTGCAGATGCCGAAGGACAGACGTTGCTAGGTTGTGATGATTACGATTAAACTCGATGTCTAAGTAATTTTGCACTCATCTGATGATTTTAGGTCAAAACCCGAAATTTGTACTTCAGTTTAGGCAATCCCACCCACAGGGTCAACCTATTTGTGAGGTTGCTAATCCCTTCAGTAGGCACTTTATTTTTGCCCCAAGTTTGGAAAGAGTAGATCATTATATCACCATATTTAAAGTCATGCTATGAATCTATAATCTTGCAATAAGTGCCCTCTGCGGCCCTGTTCTTTTTGGCTACTTTATTTGATCATGCCTCTAAAAATATGTTTTCTCGAAAACTTTCTTCTACTGCATTGTTTAAACCACATTTTCTAAGCTATTTTTAAGTTTATTTCTTAAAATGTTTAGTTTATCCATATAATCAATTAGATAATCTGTGAAAACAATATGCAATGCCAAATGTAAAATTGTAACAGATCTGTGACTATAAACTCAAGAGTCCCAATCTGAATCTGTCCCCCTCAATGGAAAGATTGTGTCATGACATTGCAAAATCTTAAGCAATATACCAGTTCTTTAAACTGCCTTGGTTTTTTAGAAGTTATATTTCAGAGAGGTGCTCCTATGCACCTTCTTTCAGATTTGCACAAATGTTATGTTATTACGATTCTGCTTAAGTCATAATACTTCTGCCGCAGAAGGTTATGAGACATAAATTACATACTTTTTTTTGTTCCATGTTTGCTGAACCACTTTTTTTTTCCCTTGCCCAGTCTAGAGACAGTTATTCAGACATGCTTGAAGGAGGCAACTTTTCCAACCAGGAGACCTTGTACGAAGTTCTATCCGTGAGGAAAGATGCTACATATGATGAAATTCGTGCAGCATATAAGTCTGCTGTACTAAATACACATCCTGACAAAGCACAGATGGCTCTCAATCCATTGGTGTCTTCCAGTGAGCGAAATGAATTTCTCAGTGTGCAAAAGGCATGGGAAATCCTACGTTATCCCAAATCTAGAGCAGAATATGATAAGCAACTGCAATCTTCCCGACAGAACCTTGAAATTGTTGCAACTGAAATTGAAATTGATGACATGATCGTTGAAAGTACTGCTGATTCTGTGGAGCTTTTGTATCCTTGTAGGTGTGGTGATTATTTCTCAATCACTTCACGTGAACTTGGTCAGATTGGAATTTCAGTCAGGGAGGACGGAGAGATGGAATTGCACACTTCTTATTCTGTTCCAGCATCTGTTGTTCTTGGCTGTGGCTCATGTTCTCTTAAGGCACGATTGGTTACAAATAAAACTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030916