Os06g0267500

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Revision as of 09:13, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0267500| Description = Similar to NAM1 protein (Fragment)| Version = NM_001063884.1 GI:115467499 GeneID:4340715| Length = 2204 bp| Definit...")
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Gene Name

Os06g0267500

Description

Similar to NAM1 protein (Fragment)

Version

NM_001063884.1 GI:115467499 GeneID:4340715

Length

2204 bp

Definition

Oryza sativa Japonica Group Os06g0267500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:8881615..8883818

Sequence Coding Region

8882307..8882609,8882779..8883159,8883240..8883296

Expression

GEO Profiles:Os06g0267500

Genome Context

<gbrowseImage1> name=NC_008399:8881615..8883818 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:8881615..8883818 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgctatatatgagcaccatgaaaggtggtaaacctgaaaagaccaattgggtgatgcatcagtaccacctaggaactggggaagatgaggtagaagggcagtatgttgtctctaaattattgtttcagcaacagtttaaacctggggagaagaacgcacaggacttaacctctgcagatgctttagaatctatagttgctgaagatcttccaaatattcctccacttcccctggaagaacatgtttttaccaaccaagaactagaagttcttgagaaatctgaaactatcactgaccagggaaaagagactagcgaaataaacaacgaagataacgctgtagaagatgttgcgcatatggctactgagaaacctgaggatggagataacccctcatcgcaagatccgaaatggtgggaaggtgaatcccagttcctgttagactctcagcaactggcagagaaccttgcgatttgcgatgagttccttcagagtcagagccagacctcatgcggcggtggagatgatgaaaccgataagataaagccccgtcttgctgtttatgcccagttgccagtagaggacttgaagaaggatctggaagaatgccagaggttggacccctcagatggcacaaatcttgagcttgaaaatgcgtctgaatttcgactgagccaaattgagttttcgcaggatagctttacgacggcatgggctggtggcaaggtgatcgattga</cdnaseq>

Protein Sequence

<aaseq>MVLYMSTMKGGKPEKTNWVMHQYHLGTGEDEVEGQYVVSKLLFQ QQFKPGEKNAQDLTSADALESIVAEDLPNIPPLPLEEHVFTNQELEVLEKSETITDQG KETSEINNEDNAVEDVAHMATEKPEDGDNPSSQDPKWWEGESQFLLDSQQLAENLAIC DEFLQSQSQTSCGGGDDETDKIKPRLAVYAQLPVEDLKKDLEECQRLDPSDGTNLELE NASEFRLSQIEFSQDSFTTAWAGGKVID</aaseq>

Gene Sequence

<dnaseqindica>693..995#1165..1545#1626..1682#ttattccaacagtcgaggaagatgatggtatctgctatacccatccacagaaacttccaggtaaccgttagtgaaaggatatatatttttgtttctctcttcgtggggtgagcaagagaagtccaattttattttcatataagagtaaaattcacatttttcagcttgtatcaaatgcttgcctttggtccgttttcttttggtatttattttcttagtcacaccatatgcacaaagtttggcggtagtgcgggtgtggcaataaggctacttattttacttctctttattggcttattaacccttgatttttcactattccactcagcaacactctacaactaagtaattctcattgactggtttgcatttcttaaatggttccgatagagcattcaaattctactttcttttgacataggaatctcagtttctaactggaaaattgttgttttttgtacctctgttgtattgcttgtggtattcttcaactgacttttttttctttttcaggtgtcaagcaagatggaagcgtatcacactttttccatagaacatttaaggcctataatactggaataagaaagcgccggaagataaacactggtgatcttgctgatgtccgctggcacaagactggtaagacaaggccagtagtagttgatggaaaacaccttggttgtaagaaattcatggtgctatatatgagcaccatgaaaggtggtaaacctgaaaagaccaattgggtgatgcatcagtaccacctaggaactggggaagatgaggtagaagggcagtatgttgtctctaaattattgtttcagcaacagtttaaacctggggagaagaacgcacaggacttaacctctgcagatgctttagaatctatagttgctgaagatcttccaaatattcctccacttcccctggaagaacatgtttttaccaaccaagaactagaagttcttgagaaatctgaaactatcactgaccaggtaattgaacatctaagctttctttatttcccttccaccttttccctatgtgcagcacatatttccaggtaattcgacatagcaaagaaaatgtcaatatagtttctttataatgatattaaagggaattggataaatgttgtgccttcttttgctggcaaatgtacagggaaaagagactagcgaaataaacaacgaagataacgctgtagaagatgttgcgcatatggctactgagaaacctgaggatggagataacccctcatcgcaagatccgaaatggtgggaaggtgaatcccagttcctgttagactctcagcaactggcagagaaccttgcgatttgcgatgagttccttcagagtcagagccagacctcatgcggcggtggagatgatgaaaccgataagataaagccccgtcttgctgtttatgcccagttgccagtagaggacttgaagaaggatctggaagaatgccagaggttggacccctcagatggcacaaatcttgagcttgaaaatgcgtctgaatttcgactgagccaaattgtacgtttccattgtctcatgttaaaacgtccagttttctctccatcctttactttgctaaacttgtgcttcacttgcaggagttttcgcaggatagctttacgacggcatgggctggtggcaaggtgatcgattgacatgtctccaaggtgctgtcaacaccattttgtacattgaagaaacaactgaagcctcttccttctgcgagacaacagtaaaatgctgtcgatatatgtggtgaagcaactcttgtctcggacagtaaaaagtcataattttggcccggcggcttgccggggtaggcaaaaggtgagcttatgcgctggcttgcccctgaatcccttgatgcatatggactgtgcaccggtgactattcaatgctaaagatcacatattcctggctgtaaattgtgatggtggatgtctcattttgcttggatactctggaccatccggtggtacaaggggaacttttgcttctggttgaactgattactccaataactttcgtgttaataacttttgccatcatgatagtgcctattatttataaatgtggacacaagtcattttctggagcttgtggtaaagcagggctgagaatctcgtgcaagcttcatcttgtaaattgcagtaatcagcataagattgtgacagat</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0267500, RefSeq:Os06g0267500