Os06g0267600

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Revision as of 09:13, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0267600| Description = Conserved hypothetical protein| Version = NM_001063885.1 GI:115467501 GeneID:4340716| Length = 5263 bp| Definition ...")
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Gene Name

Os06g0267600

Description

Conserved hypothetical protein

Version

NM_001063885.1 GI:115467501 GeneID:4340716

Length

5263 bp

Definition

Oryza sativa Japonica Group Os06g0267600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:8896949..8902211

Sequence Coding Region

8896981..8896983,8897073..8897185,8898159..8898348,8898583..8898696,8898775..8898882
,8899125..8899257,8899390..8899592,8899810..8900006,8901611..8901671

Expression

GEO Profiles:Os06g0267600

Genome Context

<gbrowseImage1> name=NC_008399:8896949..8902211 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:8896949..8902211 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggttcttggttgctacaactcaaaggattacccgagagaatcttgttctagtgcattcatgttagaactggagtctgtaagacctgaaccacaggctcctttggaagattacaggttacatcttgagattttgcctctacagttgcatcttgatcaagggcaacttaacttccttatcagtttcttccagaatgacttgtgcaacaaccctaatttggcttgcgaaaatgagaatattgacgcgcagagtacaatgtatcgaagcgatacaattgctgatgaggcattacttcctttctttcagaaatttgatgtgaagcctcttgttctgcacattaattatattcctcggcattttgatcctgttgcacttagcaaaggaaattatgcagaacttctcaacatttttccatggaagggaattgatttaaagctgaagcaggtttctgccatgggtgtttatggtttcaataatatatgtgaaatagtagctgcagaatggttagaggacatctcaaaaaatcaggtccataaattgttaaaagggcttccacctataaaatcattagttgctgtgagttcaggcactaagaaattggtctctttacccataaagagctataagaaggatcggaagttgctcaagggaatgcaaagaggtgcggttgctttcattagaagtgtttccattgaagctgtggggcttggtgtacatttggcggcaggagctcatgatatgcttctaaagacagaaagtgcccttacagcaattccaccacctttagcctcacgtgaagcaaaaagaaccaaagacaatgtaagagctaaccagcctgaaagtgcgcaagaagggctgaagaaggcatatgaaagcttgaccgatgggtttggaaggactgcctctgctttgattggaaatcctattaaagtttataatcgtggggctggtgccggatcagctttggctactgcaatctgtggagctccaggtgctgcagtggctccattatcagcgtcttttcgtgctgcacattatacacttcttggtataaggaatagccttgatcctgaacgcaagaaagaatctatgtacaaataccacgggcctcctcaattgtag</cdnaseq>

Protein Sequence

<aaseq>MVLGCYNSKDYPRESCSSAFMLELESVRPEPQAPLEDYRLHLEI LPLQLHLDQGQLNFLISFFQNDLCNNPNLACENENIDAQSTMYRSDTIADEALLPFFQ KFDVKPLVLHINYIPRHFDPVALSKGNYAELLNIFPWKGIDLKLKQVSAMGVYGFNNI CEIVAAEWLEDISKNQVHKLLKGLPPIKSLVAVSSGTKKLVSLPIKSYKKDRKLLKGM QRGAVAFIRSVSIEAVGLGVHLAAGAHDMLLKTESALTAIPPPLASREAKRTKDNVRA NQPESAQEGLKKAYESLTDGFGRTASALIGNPIKVYNRGAGAGSALATAICGAPGAAV APLSASFRAAHYTLLGIRNSLDPERKKESMYKYHGPPQL</aaseq>

Gene Sequence

<dnaseqindica>33..35#125..237#1211..1400#1635..1748#1827..1934#2177..2309#2442..2644#2862..3058#4663..4723#tttgcgaccaaagtacacatgctccatggaaaatggtatgcatttttctgtccaaattatctagaatttactattaccactggactaatggtttctaaatcctctatccattttcgaatcaaaggttcttggttgctacaactcaaaggattacccgagagaatcttgttctagtgcattcatgttagaactggagtctgtaagacctgaaccacaggctcctttggaagattacaggtaaatatggtgtttctttacactgaattaaactatcagaaaacatttgtgattttgcttgtttctgttaatccatagtgaacattgcgtttgcctcatacttaatgggcttgcattgttaaaagaaactacaaggctacctttttgtgccctcgatgtatgaaggcactcattgcccaggtagatgtaggaaaaaacctatgtagtggactaggttccacattacagatcatattgcaggaataatttctagtgtacccagctatttgacttttttttttacctcagcacatggtaatatgcaagatgatgagtctgagctgaacaatagaggcacatttctgaatgtaataattagctcttttatgatgaatttatgtttctggattcgatataaatccagtgtttgtgtactgctgcactttgatcgcaattctgtaccctcaagtccaattcaaggagtaacgtaaaatagcagatagaacatgaaggtcctttattaattagtgttttttatcatgttagtatatgataaaatggtaaatttaaaattataatggtgatacaaatgagatagagcttgttaacgagcttaacgatctagcttgtgagccgagctaagctaggcttttagttctctaaggttaacaaactgagctgagttggctatacaccccacacgtcaacaagtttaacttgagtgcatgtaaaataaagaaacgcatagaagatggcagatccaaataaaaaaaaatcatgcatgcgtggttcttttggcagatattatttcacccttttgccctttagccctttagccgttgctccacacacattttgtgtccatataccatatctgaatgctgaagtataagtgagtttgagtactggtgtcttttttctactctctatttttggtacttattttagactcagtatgatgactgatttccttgcactatcctaaatatttcaggttacatcttgagattttgcctctacagttgcatcttgatcaagggcaacttaacttccttatcagtttcttccagaatgacttgtgcaacaaccctaatttggcttgcgaaaatgagaatattgacgcgcagagtacaatgtatcgaagcgatacaattgctgatgaggcattacttcctttctttcaggtatcttgaagtttttcagtttttatttcctctttttttccccactcatggtacttgagatggacatatggttttaattttttttctcctactttacctgatatattttaacaattgtttttacagcaactattagtttcttttcattttcaaaatttttctactaattagcagcatggatcttctttgtttagtaaacaatattatggtctaatttatttcttttgatgctagaaatttgatgtgaagcctcttgttctgcacattaattatattcctcggcattttgatcctgttgcacttagcaaaggaaattatgcagaacttctcaacatttttccatggaaggtaattcattgttcagaactatacatcatagccagtcgtatctttgtaggcaaccctgatactaaatttgctgtgcagggaattgatttaaagctgaagcaggtttctgccatgggtgtttatggtttcaataatatatgtgaaatagtagctgcagaatggttagaggacatctcaaaaaatcaggtcctaatcttcccacacatatcttacatttatattaaagatgcctgctgttgtgtacaccaataccgattcaggacatgcaatgctataagagagaatttaaaatttgcatgttggcatacactatttcttcacaaaaaaggagaatcttatatcttcctgtcttacagatgattttctattctcatttgtttcaaaaattttctattctcatccaaatcgacaatctgttccttgtttaggtccataaattgttaaaagggcttccacctataaaatcattagttgctgtgagttcaggcactaagaaattggtctctttacccataaagagctataagaaggatcggaagttgctcaagggaatgcaaagaggtaagccacatatagctgcactactatgctgaaatattttgtttgacatttctgttgatgtgttaatatatgatggtattgtgaaattcttgatgtcatgcatccctgattacacttgatggtgattgacaggtgcggttgctttcattagaagtgtttccattgaagctgtggggcttggtgtacatttggcggcaggagctcatgatatgcttctaaagacagaaagtgcccttacagcaattccaccacctttagcctcacgtgaagcaaaaagaaccaaagacaatgtaagagctaaccagcctgaaagtgcgcaagaagggctgaagaaggtattgaattcatccaaattgcacatgaactcatcttttctgagatgaactcatctgttgtctgctaataacatgttgctttaacctaactatttgcaattctatttttgtttgtgatttgcgtttactttctatatcaatatggtaagtactgccagtataagtttcatttgctgtgtaattatcaataattcaatatatgctgaacatttttcaggcatatgaaagcttgaccgatgggtttggaaggactgcctctgctttgattggaaatcctattaaagtttataatcgtggggctggtgccggatcagctttggctactgcaatctgtggagctccaggtgctgcagtggctccattatcagcgtcttttcgtgctgcacattatacacttcttggtataaggaataggtgatttcactcatcctcaaacctcaaatcagcaaacattgtgaagctctacggttattttgaattcttaaatcagtccagaccattcccaactcactgttgactcctcggtctgttctgttatcatttactcgatgcaataggactaagtttttctgatcacatttcacatgtgacatgagaccatcagctagactcaaaacatggcataaaaatttgtattttctaatctaacttgttttctttttttacttgtttatttatgatatatcagcaaagtctccatgcacatgttagataatgctccctttgttttttaacagatgacaccgttgactttggaccatttgtcctattcaaaaaatttatataaatatcatttatcttgttgtgacatgttttatcatgaaagtatgatttatactttagcatatttacactattttttttaataaaacaaatggtcaaacgttattccaaatgtcaaggacgtcatctattaaaaaatggagttattacattttgtaatcatatacttcctccgattcatattataagtcgttttgacttttttttaagtcaaactttttaagtttataaaaaagatagaaatattttcaatccataataaacatattatcaaaatatattaaatgttagttttaatgaaactaattgtgtgttgtagttgttgctaaaattttctataaacttggttaaactttaagaagtttgactaggaaaaaaaatcaaaacgacttataatatgatgaaacggaggtagtatttataaaataaaaataaaaaaataaaatctcctctctcttttttcccccatataatggtgagcaagatctcaaggtctgattgcacaaattctgaatagttttctatttgagattggagggagtaatacaaatagatattaaaaagatttgaaaatagaaatatattgacttgcaatttactgtattagtatatttttgtcttctgttggaactggaagaagttagcaacggaaggtaacaaagttcatggatctggacagcttaggattaatcaataaaacttcgtagctaaataactgtaactgacttgccccaaatgaaaaatgtatatctatgcaaaagaatgagaatatagttgatttatcgtcctaaatattatcagtctgtgcactgataaaactatttgttactctgggtaaaatatgtgtttgagcaaaaacagtttatttacaccgaggacttatgagggtcagaaggtgcttggcattccctacattgacacaagctcacttaactgggagaacttgtaaccaatgatttttaactaggctcttacgaattgcaaaaataataatgtgcatgaattaggctaggcaactgactaggtaactatggaacaatctacagaaaaatctaattgtgatcttggtttgatttataatattagtggaattgagttctcttccgatcagcatcggtgaaaatacatatttgtcctatgcgaatgttacaactcttgagcatacttcatttttggcatgaccacagactgctaatgttggtttgctaatattttcttttcttctacattcacagccttgatcctgaacgcaagaaagaatctatgtacaaataccacgggcctcctcaattgtagacttccattgagaagaggtggtctgttcattcttttgcgagatctcgtatttacctggaagaactggttcaagagcacatgtgtgcaatctcatcaaagggtggtgggcaaacttgtacaggataagtcagatttccacactagcaatccaaccatttgtgaatcagtgccatctccgatgttcttgttggagttcataatccatctcctctgcaggtgtacagtttcagatgccacgtcgaaaaccttcatactgtaaattactagcacacgatcacggttgtaatcacaaacgtggccacccggagcgggtggaagttttgttgactccttgcttaggatttggctagagagagagggtcacagggagcttggctcggtggctcttgtacataaatttggtggtgattactgagtagtgcaaatgtaaatatctctcttgtttctcggttttccatttacgtttttgttggtttgagaaactgctcactgtaactctcactctacaagtgtaaatatcatcaggttttgtgctgctgc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0267600, RefSeq:Os06g0267600