BGIOSGA031044

From RiceWiki
Revision as of 17:26, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA031044

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA031044, complete gene.

LocusTag

OsI_31948

Ensembl Transcript ID

BGIOSGA031044-TA

Ensembl Protein ID

BGIOSGA031044-PA

Length

2954

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:18213501..18216454

Sequence Coding Region

18213501..18214112,18214853..18216454

Genome Context

<gbrowseImage1> name=IndicaChromosome09:18213501..18216454 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:18213501..18216454 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTGTGTATTTGGTTGGTCCACTGCTCTCCAAGGTACTGGAGAAGGCTTCCAGCTTTCTTGTAGACATGTACAAGGTGATGGATGGCATGGAGGACCAGCGTGAGACTCTGGAGAGCTTGCTTCCAGCCATCCTCGACGTCATCCAAGATGCGGAGGAGAAGAAAAATCATCGATCCGGTCTAGTTTGCGCTTGGCTCAAATCACTCAAGAAGGTGTCCTACGAGGCAATTGACGTCTTCGACGAGTTCAAGTACGAGTCGCTCCGGCGTGAGGCCAAGAAGAAAGGGCACCACAACCACACTATGCTTGTCATGGACTCTGTAAGCCTCTTCCCTTGTCGTAATCCTATTGTCTTCCGCTATAGGATGGGCAAGAAACTGCGAAAGATCGTGGAGAAAATCAAGGAACTTGTCTTGGAGATGAACTCCTTTGGACTCGTATGCCAGGAGGAAACACCAAAGCAGTGGAGGAAAATTGATCCCATCATGGTTGATTCTGACAAGGATATTGTTAGCAGATCTAGAGATGAGGAGAAAAGAAGATTATCAAGATATTGCTCGATAAAGCAAACAGCAAGGACCTCACAGTCCTTCCTATTGTTGGAACGGGGGGAAGACCATCTGGAAACAGTAGCCGAGAATATTTTCAAGGAACTAGCTTGGAGGTCATTTTTTCAAGATGTGAAAAAAATTTCTCAGCGGGGGGAGAATGTGTATAGGAGACAGCTCCGTGACAGAACAACATGCAAGATGCATGATCTTATGCATGACATTTCTCAATCTGTTATGGGGAAAGAATGTGTCAGTATAATTTGTTCGTCTAATTTCAGAAATCTGATGCTAGAGCATCCTCTATATCACGTTTTCATACCATACACCAGCATTGCTCTTCCAGATGACTTTATGGGAAATGAAGCTCCAGCTCTCCGGACTTTATTGTTTCGAGAGTATTATGGTAATGTCTCAACATCACATTTATTTAAGTGCAATTATCTACAACTAAGAGCATTAGAGCTCCCACGAGTGGAAGAATTACCAATCAGGCCAAGACACCTACAACATCTAAGATATCTAAATCTCTCAGACAACAGTAATATCCATGAACTTCCTGCAGACATAAGCACAATGTACAATCTACAGACATTAAACCTTTCTGATTGCTATAATCTTGTTAGACTCCCAAAGGATATGAAGTATATGACAAGCCTACGACACCTTTATACAAATGGATGCTCAAAATTGAAGTGCATGCCTCCAGACCTTGGACAGTTAACTTCCTTACAGACATTAACATATTTTATTGTGGGTACTAGCACTAGTTGCAGTACCCTTAGGGAAGTGCATAGCTTAAACCTTTCTGGCGAACTAGAGTTATGTGGCCTAGAAAATGTATCTCAAGAACAAGCAAAAGCAGCCAATCTTGGAAGGAAAGAGAAACTTACACACTTATCTCTTGAATGGAATGGCGAATACCATGCTGAAGAACCAGATTACCCTGAGAAGGTTCTTGATGCTCTTAAACCTCATCATGGTCTCCATATGCTTAAGGTAGTTTCCTATAAAGGCACTAATTTTCCAACATGGATGACAGATCTTAGTGTTCTTGAGAACTTGACGGAGCTCCATCTAGAGGGCTGTATAATGTGTGAAGAATTTCCTCAATTCATACATTTCAAGTTTCTTCAAGTTCTCTATTTGATAAAACTAGATAAATTGCAAAGCTTATGCTGCGAGGAAGCAAGAGATGGAAAAGTACAAATATTTCCAGCATTAAAGGAAGTCAAGTTAATTGATTTGGAAAGGTTTGAGAGTTGGGTGGAAACTGAAGGAAAACAAGAAAACAAACCAACATTTCCTCTGCTTGAGGAGGTTGAAATCAGTAACTGTCCAAAGTTGACTAGTCTACCCAAAGCACCAAAGCTGAAGGTTTTAAAGCTAAATGAAAACAAGGCAGAGCTGTCATTGCCATTGCTTAAATCCAGATACATGTCCCAATTGTCCAAGTTAAAATTGGACGTGCTTGACAAAGAAGCTATATTGCAGCTTGATCAAATTCACGAATCATCTCTCTCAAATATGGAGTTAAGGCACTGCAACTTTTTCTTCCCCACAATCCCATCAGAACCAATAATTGGGATTTGGAAATGGTTTCGACAACTTGTGTATTTGGAAATCAACTCCAGTGATGTGCTCATCTACTGGCCGGAGTAA</cdnaseq>

Protein Sequence

<aaseq>MAVYLVGPLLSKVLEKASSFLVDMYKVMDGMEDQRETLESLLPAILDVIQDAEEKKNHRSGLVCAWLKSLKKVSYEAIDVFDEFKYESLRREAKKKGHHNHTMLVMDSVSLFPCRNPIVFRYRMGKKLRKIVEKIKELVLEMNSFGLVCQEETPKQWRKIDPIMVDSDKDIVSRSRDEEKRRLSRYCSIKQTARTSQSFLLLERGEDHLETVAENIFKELAWRSFFQDVKKISQRGENVYRRQLRDRTTCKMHDLMHDISQSVMGKECVSIICSSNFRNLMLEHPLYHVFIPYTSIALPDDFMGNEAPALRTLLFREYYGNVSTSHLFKCNYLQLRALELPRVEELPIRPRHLQHLRYLNLSDNSNIHELPADISTMYNLQTLNLSDCYNLVRLPKDMKYMTSLRHLYTNGCSKLKCMPPDLGQLTSLQTLTYFIVGTSTSCSTLREVHSLNLSGELELCGLENVSQEQAKAANLGRKEKLTHLSLEWNGEYHAEEPDYPEKVLDALKPHHGLHMLKVVSYKGTNFPTWMTDLSVLENLTELHLEGCIMCEEFPQFIHFKFLQVLYLIKLDKLQSLCCEEARDGKVQIFPALKEVKLIDLERFESWVETEGKQENKPTFPLLEEVEISNCPKLTSLPKAPKLKVLKLNENKAELSLPLLKSRYMSQLSKLKLDVLDKEAILQLDQIHESSLSNMELRHCNFFFPTIPSEPIIGIWKWFRQLVYLEINSSDVLIYWPE</aaseq>

Gene Sequence

<dnaseqindica>1..612#1353..2954#ATGGCTGTGTATTTGGTTGGTCCACTGCTCTCCAAGGTACTGGAGAAGGCTTCCAGCTTTCTTGTAGACATGTACAAGGTGATGGATGGCATGGAGGACCAGCGTGAGACTCTGGAGAGCTTGCTTCCAGCCATCCTCGACGTCATCCAAGATGCGGAGGAGAAGAAAAATCATCGATCCGGTCTAGTTTGCGCTTGGCTCAAATCACTCAAGAAGGTGTCCTACGAGGCAATTGACGTCTTCGACGAGTTCAAGTACGAGTCGCTCCGGCGTGAGGCCAAGAAGAAAGGGCACCACAACCACACTATGCTTGTCATGGACTCTGTAAGCCTCTTCCCTTGTCGTAATCCTATTGTCTTCCGCTATAGGATGGGCAAGAAACTGCGAAAGATCGTGGAGAAAATCAAGGAACTTGTCTTGGAGATGAACTCCTTTGGACTCGTATGCCAGGAGGAAACACCAAAGCAGTGGAGGAAAATTGATCCCATCATGGTTGATTCTGACAAGGATATTGTTAGCAGATCTAGAGATGAGGAGAAAAGAAGATTATCAAGATATTGCTCGATAAAGCAAACAGCAAGGACCTCACAGTCCTTCCTATTGTTGGAACGGGTAGGCTGGGCAAGACTACCTTTGCACAACTCATCTACAATGATCCTGAAATTGAGAAGCATTTCCCGCTCCGCAGGTGGTGTTGTGTTTCAGATGTGTTTGATGTTGTCGCTATTGCAAATAGCATATGTATGAGCAGAGAGAGAGAGAGATCATGAAAAGGCTTTGCACGACCTGCAGAAAAAAGTAGGTGGAAAGAGGTATCTCATTGTATTGGATGATGTACGGGAACGGAATTCTGACAAGTGGGGAAAGCTAAAGACTTGCCTTAAGAAGGGTGGTATGGGTAGTGCAGTACTAACAACAACTCAGGATGCAGAAGTTGCTAGAATTATGGTCGCCGGTGAAGTTGAAGTGCATAATCTTGAAAAGCTAGGAGAAATTTATGTGAAGGAAATAATCCAGAGTAGAGCATTGACTCTGCCAAACAATGACGAGTTTTTGAAGTTCTTTGTAAGATTGTGAAAAGATGTGATGGCTCGTCTTTAGGTGCAAAAGCCTTCGGTTCTATGTTAAGTACCAGGACTACTATACAAGAATGGAAGGATGTATTAGCTAAAAGCAACATTTGCAATGAGGGGGAGGATAAAATTGTTCCTATACTTCGGCTCAGCTATGATGACCTACCATCATACATGAAGCAATGCTTTTCTTTTTGTGCTATATTCCCAAAAGATTATGAGATTGATGTGGAGACTTTGATTCAGTTGTGGCTGGCACATGACTTTATACCACTGCAGGGGGAAGACCATCTGGAAACAGTAGCCGAGAATATTTTCAAGGAACTAGCTTGGAGGTCATTTTTTCAAGATGTGAAAAAAATTTCTCAGCGGGGGGAGAATGTGTATAGGAGACAGCTCCGTGACAGAACAACATGCAAGATGCATGATCTTATGCATGACATTTCTCAATCTGTTATGGGGAAAGAATGTGTCAGTATAATTTGTTCGTCTAATTTCAGAAATCTGATGCTAGAGCATCCTCTATATCACGTTTTCATACCATACACCAGCATTGCTCTTCCAGATGACTTTATGGGAAATGAAGCTCCAGCTCTCCGGACTTTATTGTTTCGAGAGTATTATGGTAATGTCTCAACATCACATTTATTTAAGTGCAATTATCTACAACTAAGAGCATTAGAGCTCCCACGAGTGGAAGAATTACCAATCAGGCCAAGACACCTACAACATCTAAGATATCTAAATCTCTCAGACAACAGTAATATCCATGAACTTCCTGCAGACATAAGCACAATGTACAATCTACAGACATTAAACCTTTCTGATTGCTATAATCTTGTTAGACTCCCAAAGGATATGAAGTATATGACAAGCCTACGACACCTTTATACAAATGGATGCTCAAAATTGAAGTGCATGCCTCCAGACCTTGGACAGTTAACTTCCTTACAGACATTAACATATTTTATTGTGGGTACTAGCACTAGTTGCAGTACCCTTAGGGAAGTGCATAGCTTAAACCTTTCTGGCGAACTAGAGTTATGTGGCCTAGAAAATGTATCTCAAGAACAAGCAAAAGCAGCCAATCTTGGAAGGAAAGAGAAACTTACACACTTATCTCTTGAATGGAATGGCGAATACCATGCTGAAGAACCAGATTACCCTGAGAAGGTTCTTGATGCTCTTAAACCTCATCATGGTCTCCATATGCTTAAGGTAGTTTCCTATAAAGGCACTAATTTTCCAACATGGATGACAGATCTTAGTGTTCTTGAGAACTTGACGGAGCTCCATCTAGAGGGCTGTATAATGTGTGAAGAATTTCCTCAATTCATACATTTCAAGTTTCTTCAAGTTCTCTATTTGATAAAACTAGATAAATTGCAAAGCTTATGCTGCGAGGAAGCAAGAGATGGAAAAGTACAAATATTTCCAGCATTAAAGGAAGTCAAGTTAATTGATTTGGAAAGGTTTGAGAGTTGGGTGGAAACTGAAGGAAAACAAGAAAACAAACCAACATTTCCTCTGCTTGAGGAGGTTGAAATCAGTAACTGTCCAAAGTTGACTAGTCTACCCAAAGCACCAAAGCTGAAGGTTTTAAAGCTAAATGAAAACAAGGCAGAGCTGTCATTGCCATTGCTTAAATCCAGATACATGTCCCAATTGTCCAAGTTAAAATTGGACGTGCTTGACAAAGAAGCTATATTGCAGCTTGATCAAATTCACGAATCATCTCTCTCAAATATGGAGTTAAGGCACTGCAACTTTTTCTTCCCCACAATCCCATCAGAACCAATAATTGGGATTTGGAAATGGTTTCGACAACTTGTGTATTTGGAAATCAACTCCAGTGATGTGCTCATCTACTGGCCGGAGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA031044