BGIOSGA031061

From RiceWiki
Revision as of 17:26, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA031061

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA031061, complete gene.

LocusTag

OsI_31979

Ensembl Transcript ID

BGIOSGA031061-TA

Ensembl Protein ID

BGIOSGA031061-PA

Length

1247

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:18412086..18413332

Sequence Coding Region

18412086..18412331,18412414..18412633,18412725..18413332

Genome Context

<gbrowseImage1> name=IndicaChromosome09:18412086..18413332 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:18412086..18413332 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTACAAGAACCAGCTGCAGGAGCTGGCGCAGAGGAGCTGCTTCAGCCTGCCGTCGTACGTGTGCACGAGGGAAGGGCCCGACCACGCGCCGCGGTTCAAGGCCACCGTCACCTTCAATGGCGAGACCTTCGACGGGCCATCCAACTGCACCACGCTCCGGCAGGCCGAGCACGCCGCCGCCGAGGTCGCCCTCGCCCGCCTCTCCCTCCGCGGCCCCTCCTCCTCCTTCACTGCCCGCGTGCTCGATGAGACGGGGGTGTACAAGAATTTGCTGCAGGAGACGGCGCATAGGGCGGGGCTGAAGCTGCCGGTGTACACGACGGTGAGGTCGGGGCCCGGGCACTCGCCGGTGTTCTCGTCGACGGTGGAGCTCGCCGGGATGAGCTTCGCCGGTGACCCTGCGAAGACCAAGAAGCACGCCGAGAAGAACGCCGCCATGGCCGCATGGTCCTCGCTCAAGCAGATGCCGGAGGCGCGCAAGGAGCCCGGCGGCGGCGGCGGCGAGGAGCAGGAGCATGTGGTCGTCGCCAGGGTGCTCGCCGCGCTGAAGCCGTGGGACGATTGCGGCGGCGGCGGTGGCGAAGGGAAGGCGGCGGCGGCGTCTCTACCGAAGAAGCATCTCGCCGGCGCGTCTTGTTCGTCCGCCACGTCGCTGTACAGACATCAATGGGGGCGTCCGTCGCCGCCGCCGGCGGCGGCCGGACCCAAGATACTGCCTCCCCTGCACCTGCTGCAGCAGCAGCAAGCGGCGGCGTCCGGCTCCCGAGCCGCCGCCGCCGAGCTGGAGCAAGAGCGGAGGAAGGCCGCCGAGCTGGTGCACATGCTGCACGCCGTCATGCTGCGCGACAGGGCGGCCGACGCAATGCCGCCGCCGACGCCGTGCTACTACGCGCCGTACTACCACCACGGCGGCGGCGTCGCCCCGACGAGGCCCTTCGCCGGCGCCGCCGGGTTCCACGCGCCGCCGGCGGTGAGCGTCCGTTCAGTGATCCCGGTCTGCGCCGCGCCACCGTCGCCGCGGCCGCCGGCGCGCAAGGAGGACGATCCAGCGACCTCATCCAAGAGGGCGTAG</cdnaseq>

Protein Sequence

<aaseq>MYKNQLQELAQRSCFSLPSYVCTREGPDHAPRFKATVTFNGETFDGPSNCTTLRQAEHAAAEVALARLSLRGPSSSFTARVLDETGVYKNLLQETAHRAGLKLPVYTTVRSGPGHSPVFSSTVELAGMSFAGDPAKTKKHAEKNAAMAAWSSLKQMPEARKEPGGGGGEEQEHVVVARVLAALKPWDDCGGGGGEGKAAAASLPKKHLAGASCSSATSLYRHQWGRPSPPPAAAGPKILPPLHLLQQQQAAASGSRAAAAELEQERRKAAELVHMLHAVMLRDRAADAMPPPTPCYYAPYYHHGGGVAPTRPFAGAAGFHAPPAVSVRSVIPVCAAPPSPRPPARKEDDPATSSKRA</aaseq>

Gene Sequence

<dnaseqindica>1..246#329..548#640..1247#ATGTACAAGAACCAGCTGCAGGAGCTGGCGCAGAGGAGCTGCTTCAGCCTGCCGTCGTACGTGTGCACGAGGGAAGGGCCCGACCACGCGCCGCGGTTCAAGGCCACCGTCACCTTCAATGGCGAGACCTTCGACGGGCCATCCAACTGCACCACGCTCCGGCAGGCCGAGCACGCCGCCGCCGAGGTCGCCCTCGCCCGCCTCTCCCTCCGCGGCCCCTCCTCCTCCTTCACTGCCCGCGTGCTCGTAAGATTGTTCCGTTCTTTCGTCGTCGTCGTCGTGGTTGATGAAGATGATTTGTGATGTGGTGTGTGATTTTGTGGTGTAGGATGAGACGGGGGTGTACAAGAATTTGCTGCAGGAGACGGCGCATAGGGCGGGGCTGAAGCTGCCGGTGTACACGACGGTGAGGTCGGGGCCCGGGCACTCGCCGGTGTTCTCGTCGACGGTGGAGCTCGCCGGGATGAGCTTCGCCGGTGACCCTGCGAAGACCAAGAAGCACGCCGAGAAGAACGCCGCCATGGCCGCATGGTCCTCGCTCAAGCAGAGTAATATCAGAACGACTGTATCGCCATTGGTGTTTGATCTTGTTTGGATCGTGTGTCATGGAGGAGACGTGTTCGTGGTTGTTTGGTGCAGTGCCGGAGGCGCGCAAGGAGCCCGGCGGCGGCGGCGGCGAGGAGCAGGAGCATGTGGTCGTCGCCAGGGTGCTCGCCGCGCTGAAGCCGTGGGACGATTGCGGCGGCGGCGGTGGCGAAGGGAAGGCGGCGGCGGCGTCTCTACCGAAGAAGCATCTCGCCGGCGCGTCTTGTTCGTCCGCCACGTCGCTGTACAGACATCAATGGGGGCGTCCGTCGCCGCCGCCGGCGGCGGCCGGACCCAAGATACTGCCTCCCCTGCACCTGCTGCAGCAGCAGCAAGCGGCGGCGTCCGGCTCCCGAGCCGCCGCCGCCGAGCTGGAGCAAGAGCGGAGGAAGGCCGCCGAGCTGGTGCACATGCTGCACGCCGTCATGCTGCGCGACAGGGCGGCCGACGCAATGCCGCCGCCGACGCCGTGCTACTACGCGCCGTACTACCACCACGGCGGCGGCGTCGCCCCGACGAGGCCCTTCGCCGGCGCCGCCGGGTTCCACGCGCCGCCGGCGGTGAGCGTCCGTTCAGTGATCCCGGTCTGCGCCGCGCCACCGTCGCCGCGGCCGCCGGCGCGCAAGGAGGACGATCCAGCGACCTCATCCAAGAGGGCGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA031061